RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
CD4-211ENST00000543755 FHOD3Q2V2M9 1422 aa15.32■□□□□ 0.04
CD4-211ENST00000543755 ATP10BO94823 1461 aa15.32■□□□□ 0.04
CD4-211ENST00000543755 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
CD4-211ENST00000543755 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
CD4-211ENST00000543755 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
CD4-211ENST00000543755 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
CD4-211ENST00000543755 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.03
CD4-211ENST00000543755 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
CD4-211ENST00000543755 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
CD4-211ENST00000543755 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
CD4-211ENST00000543755 NCKAP5LQ9HCH0 1330 aa15.22■□□□□ 0.03
CD4-211ENST00000543755 HECW1Q76N89 1606 aa15.22■□□□□ 0.03
CD4-211ENST00000543755 TOM1O60784 492 aa15.22■□□□□ 0.03
CD4-211ENST00000543755 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
CD4-211ENST00000543755 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
CD4-211ENST00000543755 ATP10AO60312 1499 aa15.2■□□□□ 0.02
CD4-211ENST00000543755 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
CD4-211ENST00000543755 ESF1Q9H501 851 aaKnown RBP15.2■□□□□ 0.02
CD4-211ENST00000543755 PLEKHD1A6NEE1 506 aa15.19■□□□□ 0.02
CD4-211ENST00000543755 CAMSAP1Q5T5Y3 1602 aa15.18■□□□□ 0.02
CD4-211ENST00000543755 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
CD4-211ENST00000543755 RGS17Q9UGC6 210 aaPredicted RBP15.14■□□□□ 0.01
CD4-211ENST00000543755 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
CD4-211ENST00000543755 C3P01024 1663 aa15.13■□□□□ 0.01
CD4-211ENST00000543755 MYT1LQ9UL68 1186 aa15.13■□□□□ 0.01
CD4-211ENST00000543755 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
CD4-211ENST00000543755 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
CD4-211ENST00000543755 PKD2Q13563 968 aa15.08■□□□□ 0
CD4-211ENST00000543755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.07■□□□□ 0
CD4-211ENST00000543755 POTEAQ6S8J7 498 aa15.05■□□□□ -0
CD4-211ENST00000543755 NUP153P49790 1475 aaKnown RBP15.05■□□□□ -0
CD4-211ENST00000543755 PTPRKQ15262 1439 aa15.03■□□□□ -0
CD4-211ENST00000543755 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
CD4-211ENST00000543755 CPS1P31327 1500 aa15.02□□□□□ -0.01
CD4-211ENST00000543755 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CD4-211ENST00000543755 PLCH2O75038 1416 aa15.01□□□□□ -0.01
CD4-211ENST00000543755 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
CD4-211ENST00000543755 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
CD4-211ENST00000543755 TCOF1Q13428 1488 aaKnown RBP15□□□□□ -0.01
CD4-211ENST00000543755 SETD1AO15047 1707 aaKnown RBP14.98□□□□□ -0.01
CD4-211ENST00000543755 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
CD4-211ENST00000543755 NPATQ14207 1427 aa14.98□□□□□ -0.01
CD4-211ENST00000543755 SAMD9Q5K651 1589 aa14.97□□□□□ -0.01
CD4-211ENST00000543755 AGLP35573 1532 aa14.97□□□□□ -0.01
CD4-211ENST00000543755 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
CD4-211ENST00000543755 SHANK2Q9UPX8 1470 aa14.96□□□□□ -0.01
CD4-211ENST00000543755 DIP2CQ9Y2E4 1556 aa14.96□□□□□ -0.01
CD4-211ENST00000543755 REREQ9P2R6 1566 aa14.95□□□□□ -0.02
CD4-211ENST00000543755 ALKQ9UM73 1620 aa14.94□□□□□ -0.02
CD4-211ENST00000543755 SUPT6HQ7KZ85 1726 aaKnown RBP14.93□□□□□ -0.02
CD4-211ENST00000543755 ZMYM3Q14202 1370 aa14.93□□□□□ -0.02
CD4-211ENST00000543755 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
CD4-211ENST00000543755 RANGAP1P46060 587 aaPredicted RBP14.92□□□□□ -0.02
CD4-211ENST00000543755 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
CD4-211ENST00000543755 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
CD4-211ENST00000543755 KDM5CP41229 1560 aa14.91□□□□□ -0.02
CD4-211ENST00000543755 ABCA6Q8N139 1617 aa14.9□□□□□ -0.02
CD4-211ENST00000543755 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
CD4-211ENST00000543755 MYO5CQ9NQX4 1742 aa14.89□□□□□ -0.03
CD4-211ENST00000543755 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
CD4-211ENST00000543755 ARHGAP5Q13017 1502 aa14.87□□□□□ -0.03
CD4-211ENST00000543755 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
CD4-211ENST00000543755 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
CD4-211ENST00000543755 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
CD4-211ENST00000543755 ATP1B4Q9UN42 357 aaPredicted RBP14.83□□□□□ -0.04
CD4-211ENST00000543755 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
CD4-211ENST00000543755 VWDEQ8N2E2 1590 aa14.82□□□□□ -0.04
CD4-211ENST00000543755 TRIM52Q96A61 297 aa14.82□□□□□ -0.04
CD4-211ENST00000543755 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
CD4-211ENST00000543755 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
CD4-211ENST00000543755 A2ML1A8K2U0 1454 aa14.8□□□□□ -0.04
CD4-211ENST00000543755 CLTCQ00610 1675 aaKnown RBP14.78□□□□□ -0.04
CD4-211ENST00000543755 DNMT1P26358 1616 aaKnown RBP14.78□□□□□ -0.04
CD4-211ENST00000543755 KIF14Q15058 1648 aa14.78□□□□□ -0.04
CD4-211ENST00000543755 LRRC7Q96NW7 1537 aa14.78□□□□□ -0.04
CD4-211ENST00000543755 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
CD4-211ENST00000543755 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
CD4-211ENST00000543755 CLIP1P30622 1438 aa14.77□□□□□ -0.04
CD4-211ENST00000543755 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
CD4-211ENST00000543755 GGT6Q6P531 493 aa14.74□□□□□ -0.05
CD4-211ENST00000543755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
CD4-211ENST00000543755 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
CD4-211ENST00000543755 KIDINS220Q9ULH0 1771 aa14.72□□□□□ -0.05
CD4-211ENST00000543755 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.05
CD4-211ENST00000543755 ABCC1P33527 1531 aa14.71□□□□□ -0.06
CD4-211ENST00000543755 SYNMO15061 1565 aa14.7□□□□□ -0.06
CD4-211ENST00000543755 SPAG9O60271 1321 aaKnown RBP14.69□□□□□ -0.06
CD4-211ENST00000543755 THEMISQ8N1K5 641 aaPredicted RBP14.69□□□□□ -0.06
CD4-211ENST00000543755 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
CD4-211ENST00000543755 TNRQ92752 1358 aa14.68□□□□□ -0.06
CD4-211ENST00000543755 MEX3CQ5U5Q3 659 aaKnown RBP14.67□□□□□ -0.06
CD4-211ENST00000543755 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
CD4-211ENST00000543755 STRCP1A6NGW2 1772 aa14.66□□□□□ -0.06
CD4-211ENST00000543755 CDC42BPBQ9Y5S2 1711 aa14.66□□□□□ -0.06
CD4-211ENST00000543755 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
CD4-211ENST00000543755 MED14O60244 1454 aa14.65□□□□□ -0.06
CD4-211ENST00000543755 FBXO31Q5XUX0 539 aaPredicted RBP14.65□□□□□ -0.06
CD4-211ENST00000543755 ZNF772Q68DY9 489 aaPredicted RBP14.65□□□□□ -0.06
CD4-211ENST00000543755 ZNF777Q9ULD5 760 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms