RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
PPME1-208ENST00000543525 CDK11AQ9UQ88 783 aaPredicted RBP18.97■□□□□ 0.63
PPME1-208ENST00000543525 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
PPME1-208ENST00000543525 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
PPME1-208ENST00000543525 KDM6BO15054 1643 aa18.96■□□□□ 0.63
PPME1-208ENST00000543525 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
PPME1-208ENST00000543525 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
PPME1-208ENST00000543525 NUP153P49790 1475 aaKnown RBP18.95■□□□□ 0.62
PPME1-208ENST00000543525 MPHOSPH9Q99550 1183 aa18.95■□□□□ 0.62
PPME1-208ENST00000543525 DAPK1P53355 1430 aa18.95■□□□□ 0.62
PPME1-208ENST00000543525 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
PPME1-208ENST00000543525 ABCC5O15440 1437 aa18.9■□□□□ 0.62
PPME1-208ENST00000543525 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
PPME1-208ENST00000543525 TROQ12816 1431 aaPredicted RBP18.87■□□□□ 0.61
PPME1-208ENST00000543525 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
PPME1-208ENST00000543525 ANKRD30BQ9BXX2 1392 aa18.84■□□□□ 0.61
PPME1-208ENST00000543525 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
PPME1-208ENST00000543525 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
PPME1-208ENST00000543525 L3MBTL2Q969R5 705 aa18.83■□□□□ 0.6
PPME1-208ENST00000543525 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.6
PPME1-208ENST00000543525 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.6
PPME1-208ENST00000543525 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
PPME1-208ENST00000543525 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
PPME1-208ENST00000543525 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
PPME1-208ENST00000543525 MYT1Q01538 1121 aa18.8■□□□□ 0.6
PPME1-208ENST00000543525 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
PPME1-208ENST00000543525 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
PPME1-208ENST00000543525 NEFLP07196 543 aa18.8■□□□□ 0.6
PPME1-208ENST00000543525 CFDP1Q9UEE9 299 aaPredicted RBP18.8■□□□□ 0.6
PPME1-208ENST00000543525 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PPME1-208ENST00000543525 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
PPME1-208ENST00000543525 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
PPME1-208ENST00000543525 ERCC6L2Q5T890 1561 aa18.78■□□□□ 0.6
PPME1-208ENST00000543525 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
PPME1-208ENST00000543525 FKBP8Q14318 412 aa18.78■□□□□ 0.6
PPME1-208ENST00000543525 NUP160Q12769 1436 aa18.77■□□□□ 0.6
PPME1-208ENST00000543525 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
PPME1-208ENST00000543525 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
PPME1-208ENST00000543525 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
PPME1-208ENST00000543525 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
PPME1-208ENST00000543525 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
PPME1-208ENST00000543525 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
PPME1-208ENST00000543525 KIF14Q15058 1648 aa18.73■□□□□ 0.59
PPME1-208ENST00000543525 PZPP20742 1482 aa18.73■□□□□ 0.59
PPME1-208ENST00000543525 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
PPME1-208ENST00000543525 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
PPME1-208ENST00000543525 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
PPME1-208ENST00000543525 NBPF8Q3BBV2 869 aa18.7■□□□□ 0.58
PPME1-208ENST00000543525 TSHZ2Q9NRE2 1034 aa18.7■□□□□ 0.58
PPME1-208ENST00000543525 ABCA8O94911 1581 aa18.69■□□□□ 0.58
PPME1-208ENST00000543525 BCANQ96GW7 911 aa18.69■□□□□ 0.58
PPME1-208ENST00000543525 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
PPME1-208ENST00000543525 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
PPME1-208ENST00000543525 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
PPME1-208ENST00000543525 KIAA1107Q9UPP5 1409 aa18.68■□□□□ 0.58
PPME1-208ENST00000543525 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
PPME1-208ENST00000543525 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
PPME1-208ENST00000543525 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
PPME1-208ENST00000543525 SHANK2Q9UPX8 1470 aa18.65■□□□□ 0.58
PPME1-208ENST00000543525 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
PPME1-208ENST00000543525 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.57
PPME1-208ENST00000543525 SHROOM2Q13796 1616 aa18.64■□□□□ 0.57
PPME1-208ENST00000543525 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
PPME1-208ENST00000543525 ATP10BO94823 1461 aa18.63■□□□□ 0.57
PPME1-208ENST00000543525 KDM4FA0A1W2PPD8 638 aa18.62■□□□□ 0.57
PPME1-208ENST00000543525 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
PPME1-208ENST00000543525 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
PPME1-208ENST00000543525 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PPME1-208ENST00000543525 PKD2Q13563 968 aa18.61■□□□□ 0.57
PPME1-208ENST00000543525 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
PPME1-208ENST00000543525 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
PPME1-208ENST00000543525 C9orf84Q5VXU9 1444 aa18.6■□□□□ 0.57
PPME1-208ENST00000543525 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
PPME1-208ENST00000543525 TSPY4P0CV99 314 aa18.57■□□□□ 0.56
PPME1-208ENST00000543525 TSPY10P0CW01 314 aa18.57■□□□□ 0.56
PPME1-208ENST00000543525 KDM5DQ9BY66 1539 aa18.55■□□□□ 0.56
PPME1-208ENST00000543525 NUP155O75694 1391 aa18.55■□□□□ 0.56
PPME1-208ENST00000543525 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
PPME1-208ENST00000543525 PTPRGP23470 1445 aa18.54■□□□□ 0.56
PPME1-208ENST00000543525 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
PPME1-208ENST00000543525 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
PPME1-208ENST00000543525 USP47Q96K76 1375 aa18.52■□□□□ 0.56
PPME1-208ENST00000543525 ARID4BQ4LE39 1312 aaPredicted RBP18.52■□□□□ 0.56
PPME1-208ENST00000543525 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
PPME1-208ENST00000543525 ARHGEF12Q9NZN5 1544 aa18.51■□□□□ 0.55
PPME1-208ENST00000543525 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
PPME1-208ENST00000543525 KIF15Q9NS87 1388 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
PPME1-208ENST00000543525 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 KDM5CP41229 1560 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
PPME1-208ENST00000543525 DIP2BQ9P265 1576 aa18.48■□□□□ 0.55
PPME1-208ENST00000543525 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
PPME1-208ENST00000543525 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
PPME1-208ENST00000543525 CCDC141Q6ZP82 1450 aa18.47■□□□□ 0.55
PPME1-208ENST00000543525 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
PPME1-208ENST00000543525 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
PPME1-208ENST00000543525 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms