RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
BECN1-203ENST00000543382 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
BECN1-203ENST00000543382 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
BECN1-203ENST00000543382 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
BECN1-203ENST00000543382 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
BECN1-203ENST00000543382 KIF14Q15058 1648 aa23.15■■□□□ 1.3
BECN1-203ENST00000543382 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
BECN1-203ENST00000543382 FOXD1Q16676 465 aa23.12■■□□□ 1.29
BECN1-203ENST00000543382 CAMSAP2Q08AD1 1489 aa23.1■■□□□ 1.29
BECN1-203ENST00000543382 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
BECN1-203ENST00000543382 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
BECN1-203ENST00000543382 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
BECN1-203ENST00000543382 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.28
BECN1-203ENST00000543382 ABCA8O94911 1581 aa23.07■■□□□ 1.28
BECN1-203ENST00000543382 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
BECN1-203ENST00000543382 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
BECN1-203ENST00000543382 ATP10BO94823 1461 aa23.02■■□□□ 1.27
BECN1-203ENST00000543382 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
BECN1-203ENST00000543382 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
BECN1-203ENST00000543382 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
BECN1-203ENST00000543382 CROCC2H7BZ55 1655 aa22.99■■□□□ 1.27
BECN1-203ENST00000543382 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
BECN1-203ENST00000543382 CDC42BPAQ5VT25 1732 aa22.98■■□□□ 1.27
BECN1-203ENST00000543382 PLEKHD1A6NEE1 506 aa22.97■■□□□ 1.27
BECN1-203ENST00000543382 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
BECN1-203ENST00000543382 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
BECN1-203ENST00000543382 RPRD2Q5VT52 1461 aaKnown RBP22.96■■□□□ 1.27
BECN1-203ENST00000543382 PZPP20742 1482 aa22.95■■□□□ 1.26
BECN1-203ENST00000543382 HSPA5P11021 654 aaKnown RBP22.95■■□□□ 1.26
BECN1-203ENST00000543382 ADGRL2O95490 1459 aa22.95■■□□□ 1.26
BECN1-203ENST00000543382 ANP32CO43423 234 aa22.94■■□□□ 1.26
BECN1-203ENST00000543382 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
BECN1-203ENST00000543382 CHD1O14646 1710 aa22.92■■□□□ 1.26
BECN1-203ENST00000543382 CCER2I3L3R5 266 aa22.9■■□□□ 1.26
BECN1-203ENST00000543382 PTPRGP23470 1445 aa22.9■■□□□ 1.26
BECN1-203ENST00000543382 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.25
BECN1-203ENST00000543382 NBPF8Q3BBV2 869 aa22.88■■□□□ 1.25
BECN1-203ENST00000543382 ANKRD30AQ9BXX3 1397 aa22.87■■□□□ 1.25
BECN1-203ENST00000543382 EIF4G2P78344 907 aaKnown RBP eCLIP22.87■■□□□ 1.25
BECN1-203ENST00000543382 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
BECN1-203ENST00000543382 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.25
BECN1-203ENST00000543382 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
BECN1-203ENST00000543382 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
BECN1-203ENST00000543382 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
BECN1-203ENST00000543382 C11orf95C9JLR9 678 aaPredicted RBP22.8■■□□□ 1.24
BECN1-203ENST00000543382 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
BECN1-203ENST00000543382 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
BECN1-203ENST00000543382 PKD2Q13563 968 aa22.79■■□□□ 1.24
BECN1-203ENST00000543382 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
BECN1-203ENST00000543382 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
BECN1-203ENST00000543382 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
BECN1-203ENST00000543382 SAMD9LQ8IVG5 1584 aa22.75■■□□□ 1.23
BECN1-203ENST00000543382 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
BECN1-203ENST00000543382 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
BECN1-203ENST00000543382 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
BECN1-203ENST00000543382 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
BECN1-203ENST00000543382 SPATA31E1Q6ZUB1 1445 aa22.73■■□□□ 1.23
BECN1-203ENST00000543382 NUP155O75694 1391 aa22.73■■□□□ 1.23
BECN1-203ENST00000543382 CCDC7Q96M83 1385 aa22.72■■□□□ 1.23
BECN1-203ENST00000543382 CNTLNQ9NXG0 1405 aa22.71■■□□□ 1.23
BECN1-203ENST00000543382 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
BECN1-203ENST00000543382 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
BECN1-203ENST00000543382 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
BECN1-203ENST00000543382 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
BECN1-203ENST00000543382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
BECN1-203ENST00000543382 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
BECN1-203ENST00000543382 KIF7Q2M1P5 1343 aa22.64■■□□□ 1.22
BECN1-203ENST00000543382 ZNF326Q5BKZ1 582 aaKnown RBP22.64■■□□□ 1.21
BECN1-203ENST00000543382 SYCP2Q9BX26 1530 aa22.64■■□□□ 1.21
BECN1-203ENST00000543382 POLR1AO95602 1720 aaPredicted RBP22.63■■□□□ 1.21
BECN1-203ENST00000543382 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
BECN1-203ENST00000543382 CCDC184Q52MB2 194 aa22.6■■□□□ 1.21
BECN1-203ENST00000543382 USP47Q96K76 1375 aa22.57■■□□□ 1.2
BECN1-203ENST00000543382 BCORL1Q5H9F3 1711 aa22.57■■□□□ 1.2
BECN1-203ENST00000543382 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
BECN1-203ENST00000543382 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
BECN1-203ENST00000543382 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
BECN1-203ENST00000543382 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
BECN1-203ENST00000543382 FKBP8Q14318 412 aa22.56■■□□□ 1.2
BECN1-203ENST00000543382 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
BECN1-203ENST00000543382 UHRF1BP1Q6BDS2 1440 aa22.55■■□□□ 1.2
BECN1-203ENST00000543382 KDM5CP41229 1560 aa22.55■■□□□ 1.2
BECN1-203ENST00000543382 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
BECN1-203ENST00000543382 MAST1Q9Y2H9 1570 aa22.54■■□□□ 1.2
BECN1-203ENST00000543382 BCANQ96GW7 911 aa22.54■■□□□ 1.2
BECN1-203ENST00000543382 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
BECN1-203ENST00000543382 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
BECN1-203ENST00000543382 RALGAPBQ86X10 1494 aa22.52■■□□□ 1.2
BECN1-203ENST00000543382 KDM2AQ9Y2K7 1162 aa22.5■■□□□ 1.19
BECN1-203ENST00000543382 UNC13BO14795 1591 aa22.48■■□□□ 1.19
BECN1-203ENST00000543382 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
BECN1-203ENST00000543382 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
BECN1-203ENST00000543382 PLEKHH2Q8IVE3 1493 aa22.46■■□□□ 1.19
BECN1-203ENST00000543382 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
BECN1-203ENST00000543382 PLCH2O75038 1416 aa22.45■■□□□ 1.19
BECN1-203ENST00000543382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.181e-6■□□□□ 11.3
BECN1-203ENST00000543382 CARD11Q9BXL7 1154 aa22.45■■□□□ 1.18
BECN1-203ENST00000543382 DHX29Q7Z478 1369 aaKnown RBP22.45■■□□□ 1.18
BECN1-203ENST00000543382 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
BECN1-203ENST00000543382 PLA2R1Q13018 1463 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms