RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
RPS6KC1-206ENST00000543354 TMF1P82094 1093 aa17.8■□□□□ 0.44
RPS6KC1-206ENST00000543354 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
RPS6KC1-206ENST00000543354 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
RPS6KC1-206ENST00000543354 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
RPS6KC1-206ENST00000543354 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
RPS6KC1-206ENST00000543354 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
RPS6KC1-206ENST00000543354 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
RPS6KC1-206ENST00000543354 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
RPS6KC1-206ENST00000543354 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.433e-6■■■□□ 17.5
RPS6KC1-206ENST00000543354 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
RPS6KC1-206ENST00000543354 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
RPS6KC1-206ENST00000543354 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
RPS6KC1-206ENST00000543354 ESF1Q9H501 851 aaKnown RBP17.72■□□□□ 0.43
RPS6KC1-206ENST00000543354 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
RPS6KC1-206ENST00000543354 HSCBQ8IWL3 235 aa17.72■□□□□ 0.43
RPS6KC1-206ENST00000543354 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
RPS6KC1-206ENST00000543354 APBB1O00213 710 aa17.71■□□□□ 0.43
RPS6KC1-206ENST00000543354 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
RPS6KC1-206ENST00000543354 FMN1Q68DA7 1419 aa17.7■□□□□ 0.42
RPS6KC1-206ENST00000543354 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
RPS6KC1-206ENST00000543354 RALBP1Q15311 655 aa17.69■□□□□ 0.42
RPS6KC1-206ENST00000543354 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
RPS6KC1-206ENST00000543354 NUP155O75694 1391 aa17.68■□□□□ 0.42
RPS6KC1-206ENST00000543354 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
RPS6KC1-206ENST00000543354 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
RPS6KC1-206ENST00000543354 MFAP1P55081 439 aaKnown RBP17.67■□□□□ 0.42
RPS6KC1-206ENST00000543354 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
RPS6KC1-206ENST00000543354 GSE1Q14687 1217 aa17.67■□□□□ 0.42
RPS6KC1-206ENST00000543354 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
RPS6KC1-206ENST00000543354 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
RPS6KC1-206ENST00000543354 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
RPS6KC1-206ENST00000543354 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
RPS6KC1-206ENST00000543354 CCDC184Q52MB2 194 aa17.66■□□□□ 0.42
RPS6KC1-206ENST00000543354 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
RPS6KC1-206ENST00000543354 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
RPS6KC1-206ENST00000543354 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
RPS6KC1-206ENST00000543354 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
RPS6KC1-206ENST00000543354 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
RPS6KC1-206ENST00000543354 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
RPS6KC1-206ENST00000543354 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
RPS6KC1-206ENST00000543354 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
RPS6KC1-206ENST00000543354 U2AF1L5P0DN76 240 aaPredicted RBP17.62■□□□□ 0.41
RPS6KC1-206ENST00000543354 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.416e-7■□□□□ 8.1
RPS6KC1-206ENST00000543354 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
RPS6KC1-206ENST00000543354 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
RPS6KC1-206ENST00000543354 SOX12O15370 315 aa17.6■□□□□ 0.41
RPS6KC1-206ENST00000543354 KIF21BO75037 1637 aa17.6■□□□□ 0.41
RPS6KC1-206ENST00000543354 USP35Q9P2H5 1018 aa17.6■□□□□ 0.41
RPS6KC1-206ENST00000543354 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
RPS6KC1-206ENST00000543354 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
RPS6KC1-206ENST00000543354 PANK3Q9H999 370 aa17.58■□□□□ 0.41
RPS6KC1-206ENST00000543354 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
RPS6KC1-206ENST00000543354 POGKQ9P215 609 aa17.57■□□□□ 0.4
RPS6KC1-206ENST00000543354 PDE3BQ13370 1112 aa17.57■□□□□ 0.4
RPS6KC1-206ENST00000543354 CASC1Q6TDU7 716 aa17.57■□□□□ 0.4
RPS6KC1-206ENST00000543354 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
RPS6KC1-206ENST00000543354 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
RPS6KC1-206ENST00000543354 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
RPS6KC1-206ENST00000543354 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
RPS6KC1-206ENST00000543354 HNRNPMP52272 730 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■■■□ 22.7
RPS6KC1-206ENST00000543354 RWDD1Q9H446 243 aaPredicted RBP17.55■□□□□ 0.4
RPS6KC1-206ENST00000543354 STK26Q9P289 416 aa17.54■□□□□ 0.4
RPS6KC1-206ENST00000543354 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
RPS6KC1-206ENST00000543354 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
RPS6KC1-206ENST00000543354 MS4A1P11836 297 aa17.53■□□□□ 0.4
RPS6KC1-206ENST00000543354 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
RPS6KC1-206ENST00000543354 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
RPS6KC1-206ENST00000543354 APAF1O14727 1248 aa17.52■□□□□ 0.39
RPS6KC1-206ENST00000543354 USP47Q96K76 1375 aa17.52■□□□□ 0.39
RPS6KC1-206ENST00000543354 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
RPS6KC1-206ENST00000543354 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
RPS6KC1-206ENST00000543354 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
RPS6KC1-206ENST00000543354 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
RPS6KC1-206ENST00000543354 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
RPS6KC1-206ENST00000543354 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
RPS6KC1-206ENST00000543354 AKNAQ7Z591 1439 aa17.49■□□□□ 0.39
RPS6KC1-206ENST00000543354 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
RPS6KC1-206ENST00000543354 FOXD4L5Q5VV16 416 aaPredicted RBP17.48■□□□□ 0.39
RPS6KC1-206ENST00000543354 FOXD4L4Q8WXT5 416 aaPredicted RBP17.48■□□□□ 0.39
RPS6KC1-206ENST00000543354 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
RPS6KC1-206ENST00000543354 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
RPS6KC1-206ENST00000543354 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
RPS6KC1-206ENST00000543354 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
RPS6KC1-206ENST00000543354 GGT6Q6P531 493 aa17.46■□□□□ 0.39
RPS6KC1-206ENST00000543354 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
RPS6KC1-206ENST00000543354 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
RPS6KC1-206ENST00000543354 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
RPS6KC1-206ENST00000543354 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
RPS6KC1-206ENST00000543354 KCNJ4P48050 445 aa17.44■□□□□ 0.38
RPS6KC1-206ENST00000543354 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
RPS6KC1-206ENST00000543354 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
RPS6KC1-206ENST00000543354 ANKRD30AQ9BXX3 1397 aa17.43■□□□□ 0.38
RPS6KC1-206ENST00000543354 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
RPS6KC1-206ENST00000543354 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms