RNA–Protein interactions for RNA: ENST00000543225.5

CCAR1-214, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-214ENST00000543225 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
CCAR1-214ENST00000543225 KIF21BO75037 1637 aa9.58□□□□□ -0.88
CCAR1-214ENST00000543225 HECW2Q9P2P5 1572 aa9.58□□□□□ -0.88
CCAR1-214ENST00000543225 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
CCAR1-214ENST00000543225 RAPGEF6Q8TEU7 1601 aa9.57□□□□□ -0.88
CCAR1-214ENST00000543225 ITGAEP38570 1179 aa9.57□□□□□ -0.88
CCAR1-214ENST00000543225 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
CCAR1-214ENST00000543225 DEKP35659 375 aaKnown RBP9.56□□□□□ -0.88
CCAR1-214ENST00000543225 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
CCAR1-214ENST00000543225 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
CCAR1-214ENST00000543225 PHLDB1Q86UU1 1377 aa9.54□□□□□ -0.88
CCAR1-214ENST00000543225 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
CCAR1-214ENST00000543225 EEA1Q15075 1411 aa9.53□□□□□ -0.88
CCAR1-214ENST00000543225 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
CCAR1-214ENST00000543225 NEO1Q92859 1461 aa9.51□□□□□ -0.89
CCAR1-214ENST00000543225 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
CCAR1-214ENST00000543225 RAPGEF3O95398 923 aa9.5□□□□□ -0.89
CCAR1-214ENST00000543225 ADAMTSL3P82987 1691 aa9.5□□□□□ -0.89
CCAR1-214ENST00000543225 FHOD3Q2V2M9 1422 aa9.49□□□□□ -0.89
CCAR1-214ENST00000543225 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
CCAR1-214ENST00000543225 FRMPD1Q5SYB0 1578 aa9.48□□□□□ -0.89
CCAR1-214ENST00000543225 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
CCAR1-214ENST00000543225 PLEKHD1A6NEE1 506 aa9.47□□□□□ -0.89
CCAR1-214ENST00000543225 RICTORQ6R327 1708 aa9.47□□□□□ -0.89
CCAR1-214ENST00000543225 EFCAB5A4FU69 1503 aa9.47□□□□□ -0.89
CCAR1-214ENST00000543225 PTPRMP28827 1452 aa9.47□□□□□ -0.89
CCAR1-214ENST00000543225 CFAP74Q9C0B2 1584 aa9.47□□□□□ -0.89
CCAR1-214ENST00000543225 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.89
CCAR1-214ENST00000543225 FBXO41Q8TF61 875 aa9.45□□□□□ -0.9
CCAR1-214ENST00000543225 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
CCAR1-214ENST00000543225 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
CCAR1-214ENST00000543225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.45□□□□□ -0.93e-6■■■□□ 14.8
CCAR1-214ENST00000543225 ARID4BQ4LE39 1312 aaPredicted RBP9.45□□□□□ -0.9
CCAR1-214ENST00000543225 FANCAO15360 1455 aa9.44□□□□□ -0.9
CCAR1-214ENST00000543225 DENND4BO75064 1496 aaPredicted RBP9.44□□□□□ -0.9
CCAR1-214ENST00000543225 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
CCAR1-214ENST00000543225 AKNAQ7Z591 1439 aa9.44□□□□□ -0.9
CCAR1-214ENST00000543225 TTC37Q6PGP7 1564 aa9.44□□□□□ -0.9
CCAR1-214ENST00000543225 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
CCAR1-214ENST00000543225 RIMS1Q86UR5 1692 aaKnown RBP9.43□□□□□ -0.9
CCAR1-214ENST00000543225 DDX10Q13206 875 aaKnown RBP9.42□□□□□ -0.9
CCAR1-214ENST00000543225 CDK13Q14004 1512 aaKnown RBP9.42□□□□□ -0.9
CCAR1-214ENST00000543225 CLIP1P30622 1438 aa9.41□□□□□ -0.9
CCAR1-214ENST00000543225 VPS8Q8N3P4 1428 aa9.41□□□□□ -0.9
CCAR1-214ENST00000543225 ZMYM4Q5VZL5 1548 aa9.41□□□□□ -0.9
CCAR1-214ENST00000543225 MYO5CQ9NQX4 1742 aa9.41□□□□□ -0.9
CCAR1-214ENST00000543225 CCER2I3L3R5 266 aa9.41□□□□□ -0.9
CCAR1-214ENST00000543225 PCF11O94913 1555 aaKnown RBP9.4□□□□□ -0.9
CCAR1-214ENST00000543225 HSPA2P54652 639 aa9.4□□□□□ -0.91
CCAR1-214ENST00000543225 ZFYVE16Q7Z3T8 1539 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 HECW1Q76N89 1606 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
CCAR1-214ENST00000543225 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 MAGI2Q86UL8 1455 aa9.39□□□□□ -0.91
CCAR1-214ENST00000543225 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
CCAR1-214ENST00000543225 PLCH2O75038 1416 aa9.38□□□□□ -0.91
CCAR1-214ENST00000543225 NBR1Q14596 966 aa9.38□□□□□ -0.91
CCAR1-214ENST00000543225 ATP1B4Q9UN42 357 aaPredicted RBP9.38□□□□□ -0.91
CCAR1-214ENST00000543225 YEATS2Q9ULM3 1422 aa9.38□□□□□ -0.91
CCAR1-214ENST00000543225 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
CCAR1-214ENST00000543225 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
CCAR1-214ENST00000543225 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
CCAR1-214ENST00000543225 SCAPERQ9BY12 1400 aa9.37□□□□□ -0.91
CCAR1-214ENST00000543225 UBE2Q2Q8WVN8 375 aa9.36□□□□□ -0.91
CCAR1-214ENST00000543225 ARHGAP35Q9NRY4 1499 aa9.36□□□□□ -0.91
CCAR1-214ENST00000543225 LRRIQ1Q96JM4 1722 aa9.36□□□□□ -0.91
CCAR1-214ENST00000543225 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
CCAR1-214ENST00000543225 KIF14Q15058 1648 aa9.35□□□□□ -0.91
CCAR1-214ENST00000543225 ANP32CO43423 234 aa9.35□□□□□ -0.91
CCAR1-214ENST00000543225 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
CCAR1-214ENST00000543225 SETD1BQ9UPS6 1966 aaKnown RBP9.34□□□□□ -0.91
CCAR1-214ENST00000543225 MLECQ14165 292 aa9.34□□□□□ -0.91
CCAR1-214ENST00000543225 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
CCAR1-214ENST00000543225 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
CCAR1-214ENST00000543225 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
CCAR1-214ENST00000543225 CDC42BPBQ9Y5S2 1711 aa9.33□□□□□ -0.92
CCAR1-214ENST00000543225 ATP10AO60312 1499 aa9.33□□□□□ -0.92
CCAR1-214ENST00000543225 TROQ12816 1431 aaPredicted RBP9.32□□□□□ -0.92
CCAR1-214ENST00000543225 ARHGAP5Q13017 1502 aa9.32□□□□□ -0.92
CCAR1-214ENST00000543225 ZNF518AQ6AHZ1 1483 aa9.32□□□□□ -0.92
CCAR1-214ENST00000543225 C9orf84Q5VXU9 1444 aa9.32□□□□□ -0.92
CCAR1-214ENST00000543225 PREX1Q8TCU6 1659 aa9.31□□□□□ -0.92
CCAR1-214ENST00000543225 ARHGEF12Q9NZN5 1544 aa9.31□□□□□ -0.92
CCAR1-214ENST00000543225 KDM5CP41229 1560 aa9.31□□□□□ -0.92
CCAR1-214ENST00000543225 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
CCAR1-214ENST00000543225 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
CCAR1-214ENST00000543225 PREX2Q70Z35 1606 aa9.29□□□□□ -0.92
CCAR1-214ENST00000543225 AFAP1Q8N556 730 aa9.29□□□□□ -0.92
CCAR1-214ENST00000543225 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
CCAR1-214ENST00000543225 CDC42BPAQ5VT25 1732 aa9.28□□□□□ -0.92
CCAR1-214ENST00000543225 ILDR2Q71H61 639 aa9.28□□□□□ -0.92
CCAR1-214ENST00000543225 CERKQ8TCT0 537 aa9.28□□□□□ -0.92
CCAR1-214ENST00000543225 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
CCAR1-214ENST00000543225 RRBP1Q9P2E9 1410 aaKnown RBP9.28□□□□□ -0.92
CCAR1-214ENST00000543225 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
CCAR1-214ENST00000543225 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.92
CCAR1-214ENST00000543225 REREQ9P2R6 1566 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms