RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 HIRIP3Q9BW71 556 aaPredicted RBP26.39■■□□□ 1.82
COPS7A-215ENST00000543155 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.81
COPS7A-215ENST00000543155 KCNH8Q96L42 1107 aa26.36■■□□□ 1.81
COPS7A-215ENST00000543155 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
COPS7A-215ENST00000543155 MPHOSPH9Q99550 1183 aa26.36■■□□□ 1.81
COPS7A-215ENST00000543155 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
COPS7A-215ENST00000543155 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
COPS7A-215ENST00000543155 CAMSAP2Q08AD1 1489 aa26.33■■□□□ 1.81
COPS7A-215ENST00000543155 KIF14Q15058 1648 aa26.32■■□□□ 1.8
COPS7A-215ENST00000543155 CCER2I3L3R5 266 aa26.31■■□□□ 1.8
COPS7A-215ENST00000543155 CROCC2H7BZ55 1655 aa26.31■■□□□ 1.8
COPS7A-215ENST00000543155 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
COPS7A-215ENST00000543155 ANP32CO43423 234 aa26.3■■□□□ 1.8
COPS7A-215ENST00000543155 FBLN2P98095 1184 aa26.29■■□□□ 1.8
COPS7A-215ENST00000543155 GPATCH8Q9UKJ3 1502 aaKnown RBP26.28■■□□□ 1.8
COPS7A-215ENST00000543155 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
COPS7A-215ENST00000543155 ABCA8O94911 1581 aa26.27■■□□□ 1.8
COPS7A-215ENST00000543155 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
COPS7A-215ENST00000543155 ANKRD30BQ9BXX2 1392 aa26.23■■□□□ 1.79
COPS7A-215ENST00000543155 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
COPS7A-215ENST00000543155 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
COPS7A-215ENST00000543155 SUPT16HQ9Y5B9 1047 aaKnown RBP26.22■■□□□ 1.79
COPS7A-215ENST00000543155 CDC42BPAQ5VT25 1732 aa26.19■■□□□ 1.78
COPS7A-215ENST00000543155 NCOA1Q15788 1441 aa26.18■■□□□ 1.78
COPS7A-215ENST00000543155 TEX14Q8IWB6 1497 aa26.18■■□□□ 1.78
COPS7A-215ENST00000543155 FOXD1Q16676 465 aa26.17■■□□□ 1.78
COPS7A-215ENST00000543155 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
COPS7A-215ENST00000543155 L3MBTL2Q969R5 705 aa26.17■■□□□ 1.78
COPS7A-215ENST00000543155 PZPP20742 1482 aa26.16■■□□□ 1.78
COPS7A-215ENST00000543155 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.77
COPS7A-215ENST00000543155 SLC4A1APQ9BWU0 796 aaKnown RBP26.14■■□□□ 1.77
COPS7A-215ENST00000543155 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
COPS7A-215ENST00000543155 ATP10BO94823 1461 aa26.12■■□□□ 1.77
COPS7A-215ENST00000543155 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
COPS7A-215ENST00000543155 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
COPS7A-215ENST00000543155 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
COPS7A-215ENST00000543155 PLEKHD1A6NEE1 506 aa26.09■■□□□ 1.77
COPS7A-215ENST00000543155 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
COPS7A-215ENST00000543155 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
COPS7A-215ENST00000543155 KIAA1107Q9UPP5 1409 aa26.04■■□□□ 1.76
COPS7A-215ENST00000543155 CNTLNQ9NXG0 1405 aa26.03■■□□□ 1.76
COPS7A-215ENST00000543155 CHD1O14646 1710 aa26.02■■□□□ 1.76
COPS7A-215ENST00000543155 ANKRD50Q9ULJ7 1429 aa26.01■■□□□ 1.75
COPS7A-215ENST00000543155 C9orf84Q5VXU9 1444 aa26■■□□□ 1.75
COPS7A-215ENST00000543155 NBPF8Q3BBV2 869 aa26■■□□□ 1.75
COPS7A-215ENST00000543155 ARHGEF5Q12774 1597 aa26■■□□□ 1.75
COPS7A-215ENST00000543155 MBD5Q9P267 1494 aa25.99■■□□□ 1.75
COPS7A-215ENST00000543155 PTPRGP23470 1445 aa25.99■■□□□ 1.75
COPS7A-215ENST00000543155 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
COPS7A-215ENST00000543155 KDM5DQ9BY66 1539 aa25.96■■□□□ 1.75
COPS7A-215ENST00000543155 PREX2Q70Z35 1606 aa25.96■■□□□ 1.75
COPS7A-215ENST00000543155 SPATA31E1Q6ZUB1 1445 aa25.95■■□□□ 1.74
COPS7A-215ENST00000543155 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
COPS7A-215ENST00000543155 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
COPS7A-215ENST00000543155 PKD2Q13563 968 aa25.91■■□□□ 1.74
COPS7A-215ENST00000543155 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
COPS7A-215ENST00000543155 C11orf95C9JLR9 678 aaPredicted RBP25.88■■□□□ 1.73
COPS7A-215ENST00000543155 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
COPS7A-215ENST00000543155 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
COPS7A-215ENST00000543155 CCDC141Q6ZP82 1450 aa25.86■■□□□ 1.73
COPS7A-215ENST00000543155 NUP155O75694 1391 aa25.85■■□□□ 1.73
COPS7A-215ENST00000543155 KIF15Q9NS87 1388 aa25.85■■□□□ 1.73
COPS7A-215ENST00000543155 FKBP8Q14318 412 aa25.84■■□□□ 1.73
COPS7A-215ENST00000543155 NEFLP07196 543 aa25.83■■□□□ 1.73
COPS7A-215ENST00000543155 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
COPS7A-215ENST00000543155 KIF7Q2M1P5 1343 aa25.82■■□□□ 1.72
COPS7A-215ENST00000543155 KDM5CP41229 1560 aa25.81■■□□□ 1.72
COPS7A-215ENST00000543155 HNRNPMP52272 730 aaKnown RBP eCLIP25.81■■□□□ 1.72
COPS7A-215ENST00000543155 UHRF1BP1Q6BDS2 1440 aa25.81■■□□□ 1.72
COPS7A-215ENST00000543155 TTC37Q6PGP7 1564 aa25.8■■□□□ 1.72
COPS7A-215ENST00000543155 MAST1Q9Y2H9 1570 aa25.79■■□□□ 1.72
COPS7A-215ENST00000543155 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
COPS7A-215ENST00000543155 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
COPS7A-215ENST00000543155 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
COPS7A-215ENST00000543155 PRKRIP1Q9H875 184 aaPredicted RBP25.78■■□□□ 1.72
COPS7A-215ENST00000543155 RALGAPBQ86X10 1494 aa25.77■■□□□ 1.72
COPS7A-215ENST00000543155 USP47Q96K76 1375 aa25.77■■□□□ 1.72
COPS7A-215ENST00000543155 MYO5CQ9NQX4 1742 aa25.76■■□□□ 1.71
COPS7A-215ENST00000543155 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
COPS7A-215ENST00000543155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.75■■□□□ 1.71
COPS7A-215ENST00000543155 SYCP2Q9BX26 1530 aa25.75■■□□□ 1.71
COPS7A-215ENST00000543155 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
COPS7A-215ENST00000543155 FAM135AQ9P2D6 1515 aa25.73■■□□□ 1.71
COPS7A-215ENST00000543155 BCANQ96GW7 911 aa25.72■■□□□ 1.71
COPS7A-215ENST00000543155 UNC13BO14795 1591 aa25.72■■□□□ 1.71
COPS7A-215ENST00000543155 ERCC6L2Q5T890 1561 aa25.72■■□□□ 1.71
COPS7A-215ENST00000543155 ZNF326Q5BKZ1 582 aaKnown RBP25.7■■□□□ 1.71
COPS7A-215ENST00000543155 PLXNC1O60486 1568 aa25.7■■□□□ 1.7
COPS7A-215ENST00000543155 PLEKHH2Q8IVE3 1493 aa25.69■■□□□ 1.7
COPS7A-215ENST00000543155 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
COPS7A-215ENST00000543155 CCDC184Q52MB2 194 aa25.67■■□□□ 1.7
COPS7A-215ENST00000543155 TSHZ2Q9NRE2 1034 aa25.66■■□□□ 1.7
COPS7A-215ENST00000543155 MRS2Q9HD23 443 aa25.64■■□□□ 1.69
COPS7A-215ENST00000543155 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
COPS7A-215ENST00000543155 DHX29Q7Z478 1369 aaKnown RBP25.63■■□□□ 1.69
COPS7A-215ENST00000543155 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
COPS7A-215ENST00000543155 IQGAP3Q86VI3 1631 aa25.61■■□□□ 1.69
COPS7A-215ENST00000543155 ROCK2O75116 1388 aaKnown RBP25.6■■□□□ 1.69
COPS7A-215ENST00000543155 UHRF1BP1LA0JNW5 1464 aa25.59■■□□□ 1.69
COPS7A-215ENST00000543155 CARD11Q9BXL7 1154 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms