RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
KDM2B-216ENST00000543025 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
KDM2B-216ENST00000543025 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
KDM2B-216ENST00000543025 ANP32CO43423 234 aa23.43■■□□□ 1.34
KDM2B-216ENST00000543025 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
KDM2B-216ENST00000543025 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
KDM2B-216ENST00000543025 ATP10BO94823 1461 aa23.37■■□□□ 1.33
KDM2B-216ENST00000543025 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
KDM2B-216ENST00000543025 ZCCHC11Q5TAX3 1644 aaKnown RBP23.35■■□□□ 1.33
KDM2B-216ENST00000543025 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
KDM2B-216ENST00000543025 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
KDM2B-216ENST00000543025 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
KDM2B-216ENST00000543025 TSHZ2Q9NRE2 1034 aa23.31■■□□□ 1.32
KDM2B-216ENST00000543025 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
KDM2B-216ENST00000543025 FKBP8Q14318 412 aa23.28■■□□□ 1.32
KDM2B-216ENST00000543025 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
KDM2B-216ENST00000543025 MIA2Q96PC5 1412 aa23.26■■□□□ 1.31
KDM2B-216ENST00000543025 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
KDM2B-216ENST00000543025 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
KDM2B-216ENST00000543025 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
KDM2B-216ENST00000543025 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
KDM2B-216ENST00000543025 NEFLP07196 543 aa23.22■■□□□ 1.31
KDM2B-216ENST00000543025 BCANQ96GW7 911 aa23.22■■□□□ 1.31
KDM2B-216ENST00000543025 TROQ12816 1431 aaPredicted RBP23.22■■□□□ 1.31
KDM2B-216ENST00000543025 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
KDM2B-216ENST00000543025 KDM6BO15054 1643 aa23.19■■□□□ 1.3
KDM2B-216ENST00000543025 KIF14Q15058 1648 aa23.19■■□□□ 1.3
KDM2B-216ENST00000543025 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
KDM2B-216ENST00000543025 NPM1P06748 294 aaKnown RBP eCLIP23.15■■□□□ 1.3
KDM2B-216ENST00000543025 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
KDM2B-216ENST00000543025 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
KDM2B-216ENST00000543025 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
KDM2B-216ENST00000543025 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
KDM2B-216ENST00000543025 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
KDM2B-216ENST00000543025 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.299e-10■■■■■ 41.2
KDM2B-216ENST00000543025 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
KDM2B-216ENST00000543025 DAPK1P53355 1430 aa23.07■■□□□ 1.28
KDM2B-216ENST00000543025 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
KDM2B-216ENST00000543025 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
KDM2B-216ENST00000543025 DNMT1P26358 1616 aaKnown RBP23.05■■□□□ 1.28
KDM2B-216ENST00000543025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
KDM2B-216ENST00000543025 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
KDM2B-216ENST00000543025 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
KDM2B-216ENST00000543025 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
KDM2B-216ENST00000543025 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
KDM2B-216ENST00000543025 ITSN2Q9NZM3 1697 aa23.02■■□□□ 1.28
KDM2B-216ENST00000543025 RPRD2Q5VT52 1461 aaKnown RBP23.02■■□□□ 1.28
KDM2B-216ENST00000543025 ABCC5O15440 1437 aa23.01■■□□□ 1.27
KDM2B-216ENST00000543025 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
KDM2B-216ENST00000543025 FOXD1Q16676 465 aa23■■□□□ 1.27
KDM2B-216ENST00000543025 GPATCH8Q9UKJ3 1502 aaKnown RBP22.99■■□□□ 1.27
KDM2B-216ENST00000543025 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
KDM2B-216ENST00000543025 ABCA9Q8IUA7 1624 aa22.98■■□□□ 1.27
KDM2B-216ENST00000543025 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
KDM2B-216ENST00000543025 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
KDM2B-216ENST00000543025 TEX14Q8IWB6 1497 aa22.97■■□□□ 1.27
KDM2B-216ENST00000543025 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
KDM2B-216ENST00000543025 CCDC7Q96M83 1385 aa22.95■■□□□ 1.26
KDM2B-216ENST00000543025 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
KDM2B-216ENST00000543025 DIP2BQ9P265 1576 aa22.92■■□□□ 1.26
KDM2B-216ENST00000543025 ANP32EQ9BTT0 268 aa22.91■■□□□ 1.26
KDM2B-216ENST00000543025 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
KDM2B-216ENST00000543025 C11orf95C9JLR9 678 aaPredicted RBP22.9■■□□□ 1.26
KDM2B-216ENST00000543025 NBPF8Q3BBV2 869 aa22.9■■□□□ 1.26
KDM2B-216ENST00000543025 PRKRIP1Q9H875 184 aaPredicted RBP22.89■■□□□ 1.25
KDM2B-216ENST00000543025 GLI2P10070 1586 aa22.89■■□□□ 1.25
KDM2B-216ENST00000543025 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
KDM2B-216ENST00000543025 RBM19Q9Y4C8 960 aaKnown RBP22.88■■□□□ 1.25
KDM2B-216ENST00000543025 SPATA31E1Q6ZUB1 1445 aa22.87■■□□□ 1.25
KDM2B-216ENST00000543025 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
KDM2B-216ENST00000543025 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
KDM2B-216ENST00000543025 PLCH2O75038 1416 aa22.87■■□□□ 1.25
KDM2B-216ENST00000543025 CAMSAP2Q08AD1 1489 aa22.87■■□□□ 1.25
KDM2B-216ENST00000543025 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
KDM2B-216ENST00000543025 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
KDM2B-216ENST00000543025 ARAP3Q8WWN8 1544 aa22.85■■□□□ 1.25
KDM2B-216ENST00000543025 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
KDM2B-216ENST00000543025 PZPP20742 1482 aa22.84■■□□□ 1.25
KDM2B-216ENST00000543025 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
KDM2B-216ENST00000543025 SAMD9LQ8IVG5 1584 aa22.84■■□□□ 1.25
KDM2B-216ENST00000543025 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
KDM2B-216ENST00000543025 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
KDM2B-216ENST00000543025 ZNF777Q9ULD5 760 aaPredicted RBP22.81■■□□□ 1.24
KDM2B-216ENST00000543025 ADGRL2O95490 1459 aa22.81■■□□□ 1.24
KDM2B-216ENST00000543025 ERICH6BQ5W0A0 696 aa22.8■■□□□ 1.24
KDM2B-216ENST00000543025 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
KDM2B-216ENST00000543025 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
KDM2B-216ENST00000543025 CROCC2H7BZ55 1655 aa22.79■■□□□ 1.24
KDM2B-216ENST00000543025 FANCAO15360 1455 aa22.77■■□□□ 1.24
KDM2B-216ENST00000543025 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
KDM2B-216ENST00000543025 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
KDM2B-216ENST00000543025 KIAA1107Q9UPP5 1409 aa22.77■■□□□ 1.24
KDM2B-216ENST00000543025 ZBED9Q6R2W3 1325 aa22.76■■□□□ 1.23
KDM2B-216ENST00000543025 IRX6P78412 446 aaPredicted RBP22.76■■□□□ 1.23
KDM2B-216ENST00000543025 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
KDM2B-216ENST00000543025 EFCAB2Q5VUJ9 269 aa22.75■■□□□ 1.23
KDM2B-216ENST00000543025 CFAP74Q9C0B2 1584 aa22.74■■□□□ 1.23
KDM2B-216ENST00000543025 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
KDM2B-216ENST00000543025 ABCC1P33527 1531 aa22.74■■□□□ 1.23
KDM2B-216ENST00000543025 SYCP2Q9BX26 1530 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms