RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 TROQ12816 1431 aaPredicted RBP19.6■□□□□ 0.73
SLC3A2-220ENST00000542922 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
SLC3A2-220ENST00000542922 CARMIL2Q6F5E8 1435 aa19.58■□□□□ 0.72
SLC3A2-220ENST00000542922 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
SLC3A2-220ENST00000542922 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
SLC3A2-220ENST00000542922 FOXD1Q16676 465 aa19.55■□□□□ 0.72
SLC3A2-220ENST00000542922 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
SLC3A2-220ENST00000542922 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
SLC3A2-220ENST00000542922 ABCA8O94911 1581 aa19.53■□□□□ 0.72
SLC3A2-220ENST00000542922 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
SLC3A2-220ENST00000542922 ITSN2Q9NZM3 1697 aa19.53■□□□□ 0.72
SLC3A2-220ENST00000542922 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
SLC3A2-220ENST00000542922 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
SLC3A2-220ENST00000542922 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
SLC3A2-220ENST00000542922 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SLC3A2-220ENST00000542922 CHD1O14646 1710 aa19.48■□□□□ 0.71
SLC3A2-220ENST00000542922 ATP10BO94823 1461 aa19.48■□□□□ 0.71
SLC3A2-220ENST00000542922 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
SLC3A2-220ENST00000542922 CROCC2H7BZ55 1655 aa19.46■□□□□ 0.71
SLC3A2-220ENST00000542922 ADGBQ8N7X0 1667 aa19.45■□□□□ 0.7
SLC3A2-220ENST00000542922 ABCC10Q5T3U5 1492 aa19.43■□□□□ 0.7
SLC3A2-220ENST00000542922 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
SLC3A2-220ENST00000542922 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
SLC3A2-220ENST00000542922 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
SLC3A2-220ENST00000542922 L3MBTL2Q969R5 705 aa19.4■□□□□ 0.7
SLC3A2-220ENST00000542922 PZPP20742 1482 aa19.4■□□□□ 0.7
SLC3A2-220ENST00000542922 PTPRGP23470 1445 aa19.38■□□□□ 0.69
SLC3A2-220ENST00000542922 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
SLC3A2-220ENST00000542922 ADGRL2O95490 1459 aa19.38■□□□□ 0.69
SLC3A2-220ENST00000542922 RPRD2Q5VT52 1461 aaKnown RBP19.37■□□□□ 0.69
SLC3A2-220ENST00000542922 TEX14Q8IWB6 1497 aa19.36■□□□□ 0.69
SLC3A2-220ENST00000542922 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
SLC3A2-220ENST00000542922 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
SLC3A2-220ENST00000542922 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
SLC3A2-220ENST00000542922 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
SLC3A2-220ENST00000542922 ANKRD30AQ9BXX3 1397 aa19.31■□□□□ 0.68
SLC3A2-220ENST00000542922 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
SLC3A2-220ENST00000542922 ANP32CO43423 234 aa19.3■□□□□ 0.68
SLC3A2-220ENST00000542922 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
SLC3A2-220ENST00000542922 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
SLC3A2-220ENST00000542922 CDC42BPBQ9Y5S2 1711 aa19.29■□□□□ 0.68
SLC3A2-220ENST00000542922 HNRNPMP52272 730 aaKnown RBP eCLIP19.27■□□□□ 0.681e-20■□□□□ 11
SLC3A2-220ENST00000542922 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.68
SLC3A2-220ENST00000542922 SHANK2Q9UPX8 1470 aa19.27■□□□□ 0.68
SLC3A2-220ENST00000542922 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
SLC3A2-220ENST00000542922 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
SLC3A2-220ENST00000542922 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
SLC3A2-220ENST00000542922 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
SLC3A2-220ENST00000542922 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
SLC3A2-220ENST00000542922 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
SLC3A2-220ENST00000542922 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
SLC3A2-220ENST00000542922 PKD2Q13563 968 aa19.24■□□□□ 0.67
SLC3A2-220ENST00000542922 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
SLC3A2-220ENST00000542922 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
SLC3A2-220ENST00000542922 KIF15Q9NS87 1388 aa19.2■□□□□ 0.66
SLC3A2-220ENST00000542922 NUP155O75694 1391 aa19.19■□□□□ 0.66
SLC3A2-220ENST00000542922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.19■□□□□ 0.664e-6■■■□□ 15.9
SLC3A2-220ENST00000542922 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
SLC3A2-220ENST00000542922 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
SLC3A2-220ENST00000542922 ABCC2Q92887 1545 aa19.18■□□□□ 0.66
SLC3A2-220ENST00000542922 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
SLC3A2-220ENST00000542922 CCDC141Q6ZP82 1450 aa19.17■□□□□ 0.66
SLC3A2-220ENST00000542922 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
SLC3A2-220ENST00000542922 CCDC7Q96M83 1385 aa19.16■□□□□ 0.66
SLC3A2-220ENST00000542922 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
SLC3A2-220ENST00000542922 KDM5DQ9BY66 1539 aa19.15■□□□□ 0.66
SLC3A2-220ENST00000542922 PELP1Q8IZL8 1130 aaKnown RBP19.15■□□□□ 0.66
SLC3A2-220ENST00000542922 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
SLC3A2-220ENST00000542922 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.66
SLC3A2-220ENST00000542922 ZNF326Q5BKZ1 582 aaKnown RBP19.13■□□□□ 0.65
SLC3A2-220ENST00000542922 MYO5CQ9NQX4 1742 aa19.12■□□□□ 0.65
SLC3A2-220ENST00000542922 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
SLC3A2-220ENST00000542922 POLR1AO95602 1720 aaPredicted RBP19.11■□□□□ 0.65
SLC3A2-220ENST00000542922 KIF7Q2M1P5 1343 aa19.09■□□□□ 0.65
SLC3A2-220ENST00000542922 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.65
SLC3A2-220ENST00000542922 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
SLC3A2-220ENST00000542922 ARHGEF12Q9NZN5 1544 aa19.07■□□□□ 0.64
SLC3A2-220ENST00000542922 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
SLC3A2-220ENST00000542922 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
SLC3A2-220ENST00000542922 USP47Q96K76 1375 aa19.05■□□□□ 0.64
SLC3A2-220ENST00000542922 KDM5CP41229 1560 aa19.04■□□□□ 0.64
SLC3A2-220ENST00000542922 UNC13BO14795 1591 aa19.02■□□□□ 0.64
SLC3A2-220ENST00000542922 UHRF1BP1Q6BDS2 1440 aa19.01■□□□□ 0.63
SLC3A2-220ENST00000542922 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
SLC3A2-220ENST00000542922 RALGAPBQ86X10 1494 aa19.01■□□□□ 0.63
SLC3A2-220ENST00000542922 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
SLC3A2-220ENST00000542922 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
SLC3A2-220ENST00000542922 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
SLC3A2-220ENST00000542922 PLEKHH2Q8IVE3 1493 aa19■□□□□ 0.63
SLC3A2-220ENST00000542922 PRKRIP1Q9H875 184 aaPredicted RBP19■□□□□ 0.63
SLC3A2-220ENST00000542922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.631e-6■■■□□ 19
SLC3A2-220ENST00000542922 BCANQ96GW7 911 aa18.99■□□□□ 0.63
SLC3A2-220ENST00000542922 PLCH2O75038 1416 aa18.98■□□□□ 0.63
SLC3A2-220ENST00000542922 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
SLC3A2-220ENST00000542922 FKBP8Q14318 412 aa18.98■□□□□ 0.63
SLC3A2-220ENST00000542922 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
SLC3A2-220ENST00000542922 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
SLC3A2-220ENST00000542922 ABCC1P33527 1531 aa18.96■□□□□ 0.63
SLC3A2-220ENST00000542922 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
SLC3A2-220ENST00000542922 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms