RNA–Protein interactions for RNA: ENST00000542862.1

ERVFRD-1-202, Transcript of endogenous retrovirus group FRD member 1, envelope, humanhuman

APPRIS P1 BASIC

Gene ERVFRD-1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-1-202ENST00000542862 CEP170Q5SW79 1584 aa11.22□□□□□ -0.61
ERVFRD-1-202ENST00000542862 ABCC5O15440 1437 aa11.22□□□□□ -0.61
ERVFRD-1-202ENST00000542862 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
ERVFRD-1-202ENST00000542862 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
ERVFRD-1-202ENST00000542862 ANP32CO43423 234 aa11.21□□□□□ -0.61
ERVFRD-1-202ENST00000542862 BCANQ96GW7 911 aa11.21□□□□□ -0.61
ERVFRD-1-202ENST00000542862 DAPK1P53355 1430 aa11.21□□□□□ -0.62
ERVFRD-1-202ENST00000542862 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
ERVFRD-1-202ENST00000542862 KDM5BQ9UGL1 1544 aa11.2□□□□□ -0.62
ERVFRD-1-202ENST00000542862 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
ERVFRD-1-202ENST00000542862 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
ERVFRD-1-202ENST00000542862 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
ERVFRD-1-202ENST00000542862 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
ERVFRD-1-202ENST00000542862 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
ERVFRD-1-202ENST00000542862 ZNF326Q5BKZ1 582 aaKnown RBP11.18□□□□□ -0.62
ERVFRD-1-202ENST00000542862 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
ERVFRD-1-202ENST00000542862 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
ERVFRD-1-202ENST00000542862 MAGI1Q96QZ7 1491 aaPredicted RBP11.17□□□□□ -0.62
ERVFRD-1-202ENST00000542862 KIF14Q15058 1648 aa11.16□□□□□ -0.62
ERVFRD-1-202ENST00000542862 TROQ12816 1431 aaPredicted RBP11.16□□□□□ -0.62
ERVFRD-1-202ENST00000542862 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
ERVFRD-1-202ENST00000542862 GCC2Q8IWJ2 1684 aa11.15□□□□□ -0.62
ERVFRD-1-202ENST00000542862 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
ERVFRD-1-202ENST00000542862 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.63
ERVFRD-1-202ENST00000542862 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
ERVFRD-1-202ENST00000542862 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
ERVFRD-1-202ENST00000542862 CARMIL2Q6F5E8 1435 aa11.14□□□□□ -0.63
ERVFRD-1-202ENST00000542862 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
ERVFRD-1-202ENST00000542862 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
ERVFRD-1-202ENST00000542862 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
ERVFRD-1-202ENST00000542862 PKD2Q13563 968 aa11.13□□□□□ -0.63
ERVFRD-1-202ENST00000542862 NUP160Q12769 1436 aa11.12□□□□□ -0.63
ERVFRD-1-202ENST00000542862 FKBP8Q14318 412 aa11.12□□□□□ -0.63
ERVFRD-1-202ENST00000542862 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
ERVFRD-1-202ENST00000542862 DNMT1P26358 1616 aaKnown RBP11.11□□□□□ -0.63
ERVFRD-1-202ENST00000542862 ATP10BO94823 1461 aa11.11□□□□□ -0.63
ERVFRD-1-202ENST00000542862 ROCK1Q13464 1354 aa11.11□□□□□ -0.63
ERVFRD-1-202ENST00000542862 NCOA1Q15788 1441 aa11.11□□□□□ -0.63
ERVFRD-1-202ENST00000542862 CCER2I3L3R5 266 aa11.1□□□□□ -0.63
ERVFRD-1-202ENST00000542862 SENP3-EIF4A1A0A087X0R7 540 aa11.09□□□□□ -0.63
ERVFRD-1-202ENST00000542862 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
ERVFRD-1-202ENST00000542862 PTPRGP23470 1445 aa11.08□□□□□ -0.64
ERVFRD-1-202ENST00000542862 PZPP20742 1482 aa11.08□□□□□ -0.64
ERVFRD-1-202ENST00000542862 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
ERVFRD-1-202ENST00000542862 RPRD2Q5VT52 1461 aaKnown RBP11.07□□□□□ -0.64
ERVFRD-1-202ENST00000542862 TSPY4P0CV99 314 aa11.06□□□□□ -0.64
ERVFRD-1-202ENST00000542862 TSPY10P0CW01 314 aa11.06□□□□□ -0.64
ERVFRD-1-202ENST00000542862 NUP155O75694 1391 aa11.06□□□□□ -0.64
ERVFRD-1-202ENST00000542862 IRX6P78412 446 aaPredicted RBP11.06□□□□□ -0.64
ERVFRD-1-202ENST00000542862 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
ERVFRD-1-202ENST00000542862 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
ERVFRD-1-202ENST00000542862 FAM9BQ8IZU0 186 aa11.05□□□□□ -0.64
ERVFRD-1-202ENST00000542862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
ERVFRD-1-202ENST00000542862 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
ERVFRD-1-202ENST00000542862 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
ERVFRD-1-202ENST00000542862 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
ERVFRD-1-202ENST00000542862 ABCA8O94911 1581 aa11.04□□□□□ -0.64
ERVFRD-1-202ENST00000542862 ABCC10Q5T3U5 1492 aa11.03□□□□□ -0.64
ERVFRD-1-202ENST00000542862 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
ERVFRD-1-202ENST00000542862 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
ERVFRD-1-202ENST00000542862 CDC42BPAQ5VT25 1732 aa11.01□□□□□ -0.65
ERVFRD-1-202ENST00000542862 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
ERVFRD-1-202ENST00000542862 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
ERVFRD-1-202ENST00000542862 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
ERVFRD-1-202ENST00000542862 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
ERVFRD-1-202ENST00000542862 KIF15Q9NS87 1388 aa11□□□□□ -0.65
ERVFRD-1-202ENST00000542862 DCAF11Q8TEB1 546 aa11□□□□□ -0.65
ERVFRD-1-202ENST00000542862 MRS2Q9HD23 443 aa11□□□□□ -0.65
ERVFRD-1-202ENST00000542862 CNTLNQ9NXG0 1405 aa10.99□□□□□ -0.65
ERVFRD-1-202ENST00000542862 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
ERVFRD-1-202ENST00000542862 ADCY10Q96PN6 1610 aa10.98□□□□□ -0.65
ERVFRD-1-202ENST00000542862 SPATA31E1Q6ZUB1 1445 aa10.98□□□□□ -0.65
ERVFRD-1-202ENST00000542862 CHD1O14646 1710 aa10.98□□□□□ -0.65
ERVFRD-1-202ENST00000542862 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
ERVFRD-1-202ENST00000542862 NEFLP07196 543 aa10.98□□□□□ -0.65
ERVFRD-1-202ENST00000542862 USP47Q96K76 1375 aa10.97□□□□□ -0.65
ERVFRD-1-202ENST00000542862 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
ERVFRD-1-202ENST00000542862 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
ERVFRD-1-202ENST00000542862 MBD5Q9P267 1494 aa10.96□□□□□ -0.65
ERVFRD-1-202ENST00000542862 ADGBQ8N7X0 1667 aa10.96□□□□□ -0.65
ERVFRD-1-202ENST00000542862 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
ERVFRD-1-202ENST00000542862 ST20-MTHFSA0A0A6YYL1 179 aa10.95□□□□□ -0.66
ERVFRD-1-202ENST00000542862 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
ERVFRD-1-202ENST00000542862 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
ERVFRD-1-202ENST00000542862 CDC42BPBQ9Y5S2 1711 aa10.93□□□□□ -0.66
ERVFRD-1-202ENST00000542862 BCORL1Q5H9F3 1711 aa10.92□□□□□ -0.66
ERVFRD-1-202ENST00000542862 ARHGAP5Q13017 1502 aa10.92□□□□□ -0.66
ERVFRD-1-202ENST00000542862 SYCP2Q9BX26 1530 aa10.92□□□□□ -0.66
ERVFRD-1-202ENST00000542862 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
ERVFRD-1-202ENST00000542862 CCDC141Q6ZP82 1450 aa10.9□□□□□ -0.66
ERVFRD-1-202ENST00000542862 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
ERVFRD-1-202ENST00000542862 PLEKHH2Q8IVE3 1493 aa10.9□□□□□ -0.66
ERVFRD-1-202ENST00000542862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
ERVFRD-1-202ENST00000542862 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
ERVFRD-1-202ENST00000542862 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
ERVFRD-1-202ENST00000542862 SHANK2Q9UPX8 1470 aa10.89□□□□□ -0.67
ERVFRD-1-202ENST00000542862 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
ERVFRD-1-202ENST00000542862 FAM135AQ9P2D6 1515 aa10.87□□□□□ -0.67
ERVFRD-1-202ENST00000542862 ROCK2O75116 1388 aaKnown RBP10.87□□□□□ -0.67
ERVFRD-1-202ENST00000542862 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms