RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 ABCA8O94911 1581 aa17.08■□□□□ 0.32
PDE1B-204ENST00000542335 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-204ENST00000542335 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-204ENST00000542335 TROQ12816 1431 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-204ENST00000542335 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
PDE1B-204ENST00000542335 ATP10BO94823 1461 aa17.07■□□□□ 0.32
PDE1B-204ENST00000542335 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
PDE1B-204ENST00000542335 DNMT1P26358 1616 aaKnown RBP17.06■□□□□ 0.32
PDE1B-204ENST00000542335 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
PDE1B-204ENST00000542335 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
PDE1B-204ENST00000542335 KDM5BQ9UGL1 1544 aa17.04■□□□□ 0.32
PDE1B-204ENST00000542335 KDM6BO15054 1643 aa17.04■□□□□ 0.32
PDE1B-204ENST00000542335 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
PDE1B-204ENST00000542335 KIF14Q15058 1648 aa17.03■□□□□ 0.32
PDE1B-204ENST00000542335 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
PDE1B-204ENST00000542335 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
PDE1B-204ENST00000542335 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.31
PDE1B-204ENST00000542335 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
PDE1B-204ENST00000542335 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
PDE1B-204ENST00000542335 DAPK1P53355 1430 aa16.99■□□□□ 0.31
PDE1B-204ENST00000542335 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
PDE1B-204ENST00000542335 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
PDE1B-204ENST00000542335 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
PDE1B-204ENST00000542335 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
PDE1B-204ENST00000542335 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
PDE1B-204ENST00000542335 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
PDE1B-204ENST00000542335 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
PDE1B-204ENST00000542335 ABCC5O15440 1437 aa16.95■□□□□ 0.3
PDE1B-204ENST00000542335 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
PDE1B-204ENST00000542335 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
PDE1B-204ENST00000542335 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
PDE1B-204ENST00000542335 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
PDE1B-204ENST00000542335 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
PDE1B-204ENST00000542335 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
PDE1B-204ENST00000542335 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
PDE1B-204ENST00000542335 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
PDE1B-204ENST00000542335 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
PDE1B-204ENST00000542335 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
PDE1B-204ENST00000542335 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
PDE1B-204ENST00000542335 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
PDE1B-204ENST00000542335 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
PDE1B-204ENST00000542335 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.29
PDE1B-204ENST00000542335 ANP32CO43423 234 aa16.83■□□□□ 0.28
PDE1B-204ENST00000542335 ZCCHC11Q5TAX3 1644 aaKnown RBP16.82■□□□□ 0.28
PDE1B-204ENST00000542335 BCANQ96GW7 911 aa16.82■□□□□ 0.28
PDE1B-204ENST00000542335 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
PDE1B-204ENST00000542335 POLR1AO95602 1720 aaPredicted RBP16.81■□□□□ 0.28
PDE1B-204ENST00000542335 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
PDE1B-204ENST00000542335 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
PDE1B-204ENST00000542335 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
PDE1B-204ENST00000542335 TTC37Q6PGP7 1564 aa16.8■□□□□ 0.28
PDE1B-204ENST00000542335 PZPP20742 1482 aa16.8■□□□□ 0.28
PDE1B-204ENST00000542335 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
PDE1B-204ENST00000542335 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
PDE1B-204ENST00000542335 FOXD1Q16676 465 aa16.79■□□□□ 0.28
PDE1B-204ENST00000542335 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
PDE1B-204ENST00000542335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDE1B-204ENST00000542335 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
PDE1B-204ENST00000542335 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.27
PDE1B-204ENST00000542335 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
PDE1B-204ENST00000542335 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
PDE1B-204ENST00000542335 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
PDE1B-204ENST00000542335 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
PDE1B-204ENST00000542335 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
PDE1B-204ENST00000542335 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDE1B-204ENST00000542335 C9orf84Q5VXU9 1444 aa16.73■□□□□ 0.27
PDE1B-204ENST00000542335 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
PDE1B-204ENST00000542335 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDE1B-204ENST00000542335 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
PDE1B-204ENST00000542335 WASHC2AQ641Q2 1341 aa16.72■□□□□ 0.27
PDE1B-204ENST00000542335 KDM5DQ9BY66 1539 aa16.71■□□□□ 0.27
PDE1B-204ENST00000542335 MBD5Q9P267 1494 aa16.71■□□□□ 0.27
PDE1B-204ENST00000542335 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
PDE1B-204ENST00000542335 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.27
PDE1B-204ENST00000542335 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
PDE1B-204ENST00000542335 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
PDE1B-204ENST00000542335 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
PDE1B-204ENST00000542335 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
PDE1B-204ENST00000542335 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
PDE1B-204ENST00000542335 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
PDE1B-204ENST00000542335 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
PDE1B-204ENST00000542335 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
PDE1B-204ENST00000542335 PLCH2O75038 1416 aa16.67■□□□□ 0.26
PDE1B-204ENST00000542335 ASXL2Q76L83 1435 aa16.66■□□□□ 0.26
PDE1B-204ENST00000542335 FKBP8Q14318 412 aa16.66■□□□□ 0.26
PDE1B-204ENST00000542335 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
PDE1B-204ENST00000542335 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
PDE1B-204ENST00000542335 CCDC7Q96M83 1385 aa16.65■□□□□ 0.26
PDE1B-204ENST00000542335 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
PDE1B-204ENST00000542335 NUP155O75694 1391 aa16.62■□□□□ 0.25
PDE1B-204ENST00000542335 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
PDE1B-204ENST00000542335 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
PDE1B-204ENST00000542335 MAST1Q9Y2H9 1570 aa16.61■□□□□ 0.25
PDE1B-204ENST00000542335 PKD2Q13563 968 aa16.61■□□□□ 0.25
PDE1B-204ENST00000542335 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
PDE1B-204ENST00000542335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDE1B-204ENST00000542335 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
PDE1B-204ENST00000542335 PLEKHH2Q8IVE3 1493 aa16.59■□□□□ 0.25
PDE1B-204ENST00000542335 KDM5CP41229 1560 aa16.59■□□□□ 0.25
PDE1B-204ENST00000542335 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms