RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
CNOT9-208ENST00000542068 NBR1Q14596 966 aa20.93■□□□□ 0.94
CNOT9-208ENST00000542068 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
CNOT9-208ENST00000542068 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
CNOT9-208ENST00000542068 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
CNOT9-208ENST00000542068 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
CNOT9-208ENST00000542068 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
CNOT9-208ENST00000542068 IQGAP2Q13576 1575 aa20.9■□□□□ 0.94
CNOT9-208ENST00000542068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.94
CNOT9-208ENST00000542068 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.94
CNOT9-208ENST00000542068 PKD2Q13563 968 aa20.89■□□□□ 0.93
CNOT9-208ENST00000542068 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.93
CNOT9-208ENST00000542068 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
CNOT9-208ENST00000542068 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
CNOT9-208ENST00000542068 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
CNOT9-208ENST00000542068 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
CNOT9-208ENST00000542068 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
CNOT9-208ENST00000542068 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
CNOT9-208ENST00000542068 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
CNOT9-208ENST00000542068 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
CNOT9-208ENST00000542068 HNRNPMP52272 730 aaKnown RBP eCLIP20.84■□□□□ 0.93
CNOT9-208ENST00000542068 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
CNOT9-208ENST00000542068 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.93
CNOT9-208ENST00000542068 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.93
CNOT9-208ENST00000542068 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
CNOT9-208ENST00000542068 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
CNOT9-208ENST00000542068 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
CNOT9-208ENST00000542068 KDM6BO15054 1643 aa20.8■□□□□ 0.92
CNOT9-208ENST00000542068 HECW1Q76N89 1606 aa20.8■□□□□ 0.92
CNOT9-208ENST00000542068 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
CNOT9-208ENST00000542068 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
CNOT9-208ENST00000542068 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
CNOT9-208ENST00000542068 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
CNOT9-208ENST00000542068 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
CNOT9-208ENST00000542068 DAPK1P53355 1430 aa20.76■□□□□ 0.91
CNOT9-208ENST00000542068 MYT1LQ9UL68 1186 aa20.76■□□□□ 0.91
CNOT9-208ENST00000542068 ABCC5O15440 1437 aa20.75■□□□□ 0.91
CNOT9-208ENST00000542068 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
CNOT9-208ENST00000542068 NUP155O75694 1391 aa20.74■□□□□ 0.91
CNOT9-208ENST00000542068 DEKP35659 375 aaKnown RBP20.74■□□□□ 0.91
CNOT9-208ENST00000542068 DCAF11Q8TEB1 546 aa20.74■□□□□ 0.91
CNOT9-208ENST00000542068 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
CNOT9-208ENST00000542068 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
CNOT9-208ENST00000542068 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
CNOT9-208ENST00000542068 MIA2Q96PC5 1412 aa20.73■□□□□ 0.91
CNOT9-208ENST00000542068 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
CNOT9-208ENST00000542068 NCOA1Q15788 1441 aa20.72■□□□□ 0.91
CNOT9-208ENST00000542068 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
CNOT9-208ENST00000542068 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
CNOT9-208ENST00000542068 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
CNOT9-208ENST00000542068 NOP58Q9Y2X3 529 aaKnown RBP20.71■□□□□ 0.91
CNOT9-208ENST00000542068 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
CNOT9-208ENST00000542068 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
CNOT9-208ENST00000542068 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
CNOT9-208ENST00000542068 WDR62O43379 1518 aa20.68■□□□□ 0.9
CNOT9-208ENST00000542068 ANKRD30BQ9BXX2 1392 aa20.68■□□□□ 0.9
CNOT9-208ENST00000542068 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
CNOT9-208ENST00000542068 ANKRD30AQ9BXX3 1397 aa20.65■□□□□ 0.9
CNOT9-208ENST00000542068 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
CNOT9-208ENST00000542068 TROQ12816 1431 aaPredicted RBP20.64■□□□□ 0.89
CNOT9-208ENST00000542068 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
CNOT9-208ENST00000542068 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
CNOT9-208ENST00000542068 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
CNOT9-208ENST00000542068 USP47Q96K76 1375 aa20.6■□□□□ 0.89
CNOT9-208ENST00000542068 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
CNOT9-208ENST00000542068 ANKRD50Q9ULJ7 1429 aa20.59■□□□□ 0.89
CNOT9-208ENST00000542068 CAMSAP2Q08AD1 1489 aa20.59■□□□□ 0.89
CNOT9-208ENST00000542068 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
CNOT9-208ENST00000542068 RPRD2Q5VT52 1461 aaKnown RBP20.58■□□□□ 0.88
CNOT9-208ENST00000542068 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
CNOT9-208ENST00000542068 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
CNOT9-208ENST00000542068 GPATCH8Q9UKJ3 1502 aaKnown RBP20.55■□□□□ 0.88
CNOT9-208ENST00000542068 PTPRGP23470 1445 aa20.55■□□□□ 0.88
CNOT9-208ENST00000542068 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
CNOT9-208ENST00000542068 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
CNOT9-208ENST00000542068 RAPGEF6Q8TEU7 1601 aa20.54■□□□□ 0.88
CNOT9-208ENST00000542068 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.88
CNOT9-208ENST00000542068 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
CNOT9-208ENST00000542068 TEX14Q8IWB6 1497 aa20.52■□□□□ 0.88
CNOT9-208ENST00000542068 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
CNOT9-208ENST00000542068 SPATA31E1Q6ZUB1 1445 aa20.51■□□□□ 0.87
CNOT9-208ENST00000542068 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
CNOT9-208ENST00000542068 KIF15Q9NS87 1388 aa20.51■□□□□ 0.87
CNOT9-208ENST00000542068 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
CNOT9-208ENST00000542068 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
CNOT9-208ENST00000542068 SKAP1Q86WV1 359 aa20.51■□□□□ 0.87
CNOT9-208ENST00000542068 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
CNOT9-208ENST00000542068 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
CNOT9-208ENST00000542068 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
CNOT9-208ENST00000542068 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
CNOT9-208ENST00000542068 KIF14Q15058 1648 aa20.48■□□□□ 0.87
CNOT9-208ENST00000542068 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
CNOT9-208ENST00000542068 NBPF1Q3BBV0 1214 aa20.47■□□□□ 0.87
CNOT9-208ENST00000542068 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
CNOT9-208ENST00000542068 PLIN1O60240 522 aa20.47■□□□□ 0.87
CNOT9-208ENST00000542068 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
CNOT9-208ENST00000542068 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
CNOT9-208ENST00000542068 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
CNOT9-208ENST00000542068 PZPP20742 1482 aa20.44■□□□□ 0.86
CNOT9-208ENST00000542068 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms