RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
RAP1B-227ENST00000542018 MLECQ14165 292 aa31.65■■■□□ 2.66
RAP1B-227ENST00000542018 ARHGEF12Q9NZN5 1544 aa31.61■■■□□ 2.65
RAP1B-227ENST00000542018 ATP10AO60312 1499 aa31.59■■■□□ 2.65
RAP1B-227ENST00000542018 MYO5CQ9NQX4 1742 aa31.58■■■□□ 2.65
RAP1B-227ENST00000542018 KIF14Q15058 1648 aa31.57■■■□□ 2.64
RAP1B-227ENST00000542018 C9orf84Q5VXU9 1444 aa31.55■■■□□ 2.64
RAP1B-227ENST00000542018 ARHGAP35Q9NRY4 1499 aa31.54■■■□□ 2.64
RAP1B-227ENST00000542018 EFCAB2Q5VUJ9 269 aa31.52■■■□□ 2.64
RAP1B-227ENST00000542018 FMN1Q68DA7 1419 aa31.51■■■□□ 2.64
RAP1B-227ENST00000542018 CERKQ8TCT0 537 aa31.51■■■□□ 2.63
RAP1B-227ENST00000542018 CEBPAP49715 358 aaPredicted RBP31.49■■■□□ 2.63
RAP1B-227ENST00000542018 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
RAP1B-227ENST00000542018 ATP1B4Q9UN42 357 aaPredicted RBP31.49■■■□□ 2.63
RAP1B-227ENST00000542018 PREX1Q8TCU6 1659 aa31.48■■■□□ 2.63
RAP1B-227ENST00000542018 LRRIQ1Q96JM4 1722 aa31.48■■■□□ 2.63
RAP1B-227ENST00000542018 KDM5CP41229 1560 aa31.47■■■□□ 2.63
RAP1B-227ENST00000542018 AFAP1Q8N556 730 aa31.45■■■□□ 2.63
RAP1B-227ENST00000542018 ZNF518AQ6AHZ1 1483 aa31.45■■■□□ 2.62
RAP1B-227ENST00000542018 TROQ12816 1431 aaPredicted RBP31.44■■■□□ 2.62
RAP1B-227ENST00000542018 UBTFP17480 764 aaKnown RBP31.44■■■□□ 2.62
RAP1B-227ENST00000542018 STRCQ7RTU9 1775 aa31.43■■■□□ 2.62
RAP1B-227ENST00000542018 ARHGAP5Q13017 1502 aa31.41■■■□□ 2.62
RAP1B-227ENST00000542018 DIP2CQ9Y2E4 1556 aa31.4■■■□□ 2.62
RAP1B-227ENST00000542018 CDK11AQ9UQ88 783 aaPredicted RBP31.4■■■□□ 2.62
RAP1B-227ENST00000542018 CDC42BPBQ9Y5S2 1711 aa31.38■■■□□ 2.61
RAP1B-227ENST00000542018 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
RAP1B-227ENST00000542018 REREQ9P2R6 1566 aa31.35■■■□□ 2.61
RAP1B-227ENST00000542018 SETD1BQ9UPS6 1966 aaKnown RBP31.34■■■□□ 2.61
RAP1B-227ENST00000542018 CLIP1P30622 1438 aa31.32■■■□□ 2.6
RAP1B-227ENST00000542018 MLH3Q9UHC1 1453 aa31.31■■■□□ 2.6
RAP1B-227ENST00000542018 C3P01024 1663 aa31.29■■■□□ 2.6
RAP1B-227ENST00000542018 TRAPPC8Q9Y2L5 1435 aa31.29■■■□□ 2.6
RAP1B-227ENST00000542018 UHRF1BP1Q6BDS2 1440 aa31.28■■■□□ 2.6
RAP1B-227ENST00000542018 PREX2Q70Z35 1606 aa31.27■■■□□ 2.6
RAP1B-227ENST00000542018 ABCC1P33527 1531 aa31.27■■■□□ 2.6
RAP1B-227ENST00000542018 AGLP35573 1532 aa31.25■■■□□ 2.59
RAP1B-227ENST00000542018 ITSN2Q9NZM3 1697 aa31.24■■■□□ 2.59
RAP1B-227ENST00000542018 MYT1LQ9UL68 1186 aa31.23■■■□□ 2.59
RAP1B-227ENST00000542018 KIDINS220Q9ULH0 1771 aa31.22■■■□□ 2.59
RAP1B-227ENST00000542018 DMRT2Q9Y5R5 561 aa31.21■■■□□ 2.59
RAP1B-227ENST00000542018 CHIC1Q5VXU3 224 aa31.18■■■□□ 2.58
RAP1B-227ENST00000542018 CDC42BPAQ5VT25 1732 aa31.18■■■□□ 2.58
RAP1B-227ENST00000542018 CASKIN1Q8WXD9 1431 aa31.17■■■□□ 2.58
RAP1B-227ENST00000542018 PTPRTO14522 1441 aa31.16■■■□□ 2.58
RAP1B-227ENST00000542018 CCDC18Q5T9S5 1454 aa31.14■■■□□ 2.58
RAP1B-227ENST00000542018 LTBP4Q8N2S1 1624 aa31.1■■■□□ 2.57
RAP1B-227ENST00000542018 ILDR2Q71H61 639 aa31.09■■■□□ 2.57
RAP1B-227ENST00000542018 SAMD9LQ8IVG5 1584 aa31.09■■■□□ 2.57
RAP1B-227ENST00000542018 NCOA1Q15788 1441 aa31.07■■■□□ 2.56
RAP1B-227ENST00000542018 CNTLNQ9NXG0 1405 aa31.06■■■□□ 2.56
RAP1B-227ENST00000542018 ESF1Q9H501 851 aaKnown RBP31.04■■■□□ 2.56
RAP1B-227ENST00000542018 DISP3Q9P2K9 1392 aa31.04■■■□□ 2.56
RAP1B-227ENST00000542018 MROH2AA6NES4 1674 aa31.02■■■□□ 2.56
RAP1B-227ENST00000542018 SYCP2Q9BX26 1530 aa31.02■■■□□ 2.56
RAP1B-227ENST00000542018 GPATCH8Q9UKJ3 1502 aaKnown RBP31.01■■■□□ 2.55
RAP1B-227ENST00000542018 FYCO1Q9BQS8 1478 aa31.01■■■□□ 2.55
RAP1B-227ENST00000542018 ZNF777Q9ULD5 760 aaPredicted RBP30.98■■■□□ 2.55
RAP1B-227ENST00000542018 SUPT6HQ7KZ85 1726 aaKnown RBP30.98■■■□□ 2.55
RAP1B-227ENST00000542018 NPATQ14207 1427 aa30.98■■■□□ 2.55
RAP1B-227ENST00000542018 CAMSAP1Q5T5Y3 1602 aa30.97■■■□□ 2.55
RAP1B-227ENST00000542018 ZMYM3Q14202 1370 aa30.96■■■□□ 2.55
RAP1B-227ENST00000542018 HNRNPMP52272 730 aaKnown RBP eCLIP30.96■■■□□ 2.55
RAP1B-227ENST00000542018 SPAG9O60271 1321 aaKnown RBP30.94■■■□□ 2.54
RAP1B-227ENST00000542018 PLXNC1O60486 1568 aa30.93■■■□□ 2.54
RAP1B-227ENST00000542018 IQSEC2Q5JU85 1478 aa30.93■■■□□ 2.54
RAP1B-227ENST00000542018 ATP7AQ04656 1500 aa30.92■■■□□ 2.54
RAP1B-227ENST00000542018 INO80Q9ULG1 1556 aaPredicted RBP30.92■■■□□ 2.54
RAP1B-227ENST00000542018 CLTCQ00610 1675 aaKnown RBP30.91■■■□□ 2.54
RAP1B-227ENST00000542018 KIAA1107Q9UPP5 1409 aa30.9■■■□□ 2.54
RAP1B-227ENST00000542018 SPATA31D1Q6ZQQ2 1576 aa30.88■■■□□ 2.53
RAP1B-227ENST00000542018 SOCS7O14512 581 aa30.88■■■□□ 2.53
RAP1B-227ENST00000542018 NCKAP5LQ9HCH0 1330 aa30.87■■■□□ 2.53
RAP1B-227ENST00000542018 A2MP01023 1474 aa30.86■■■□□ 2.53
RAP1B-227ENST00000542018 MYO3AQ8NEV4 1616 aa30.86■■■□□ 2.53
RAP1B-227ENST00000542018 ZNF142P52746 1687 aaPredicted RBP30.86■■■□□ 2.53
RAP1B-227ENST00000542018 PTPRKQ15262 1439 aa30.84■■■□□ 2.53
RAP1B-227ENST00000542018 ZNF335Q9H4Z2 1342 aaPredicted RBP30.82■■■□□ 2.52
RAP1B-227ENST00000542018 CFDP1Q9UEE9 299 aaPredicted RBP30.82■■■□□ 2.52
RAP1B-227ENST00000542018 PLEKHH2Q8IVE3 1493 aa30.82■■■□□ 2.52
RAP1B-227ENST00000542018 CEP170BQ9Y4F5 1589 aaPredicted RBP30.79■■■□□ 2.52
RAP1B-227ENST00000542018 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
RAP1B-227ENST00000542018 TCOF1Q13428 1488 aaKnown RBP30.79■■■□□ 2.52
RAP1B-227ENST00000542018 CCNB3Q8WWL7 1395 aa30.79■■■□□ 2.52
RAP1B-227ENST00000542018 GGT6Q6P531 493 aa30.76■■■□□ 2.51
RAP1B-227ENST00000542018 ZNF644Q9H582 1327 aaPredicted RBP30.75■■■□□ 2.51
RAP1B-227ENST00000542018 ADGBQ8N7X0 1667 aa30.75■■■□□ 2.51
RAP1B-227ENST00000542018 PKD2Q13563 968 aa30.73■■■□□ 2.51
RAP1B-227ENST00000542018 MBD5Q9P267 1494 aa30.73■■■□□ 2.51
RAP1B-227ENST00000542018 TIAM1Q13009 1591 aa30.73■■■□□ 2.51
RAP1B-227ENST00000542018 MTUS2Q5JR59 1369 aa30.69■■■□□ 2.5
RAP1B-227ENST00000542018 PPP6R1Q9UPN7 881 aa30.67■■■□□ 2.5
RAP1B-227ENST00000542018 DNMT1P26358 1616 aaKnown RBP30.66■■■□□ 2.5
RAP1B-227ENST00000542018 UBAP1LF5GYI3 381 aa30.66■■■□□ 2.5
RAP1B-227ENST00000542018 A2ML1A8K2U0 1454 aa30.64■■■□□ 2.5
RAP1B-227ENST00000542018 RTEL1-TNFRSF6BF6WH68 1400 aa30.63■■■□□ 2.49
RAP1B-227ENST00000542018 DHX29Q7Z478 1369 aaKnown RBP30.6■■■□□ 2.49
RAP1B-227ENST00000542018 EHBP1L1Q8N3D4 1523 aa30.6■■■□□ 2.49
RAP1B-227ENST00000542018 NEURL4Q96JN8 1562 aa30.58■■■□□ 2.49
RAP1B-227ENST00000542018 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms