RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
THBS3-211ENST00000541990 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
THBS3-211ENST00000541990 MSH5O43196 834 aa12.93□□□□□ -0.34
THBS3-211ENST00000541990 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
THBS3-211ENST00000541990 UACAQ9BZF9 1416 aa12.93□□□□□ -0.34
THBS3-211ENST00000541990 CCDC18Q5T9S5 1454 aa12.92□□□□□ -0.34
THBS3-211ENST00000541990 FOXD1Q16676 465 aa12.92□□□□□ -0.34
THBS3-211ENST00000541990 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
THBS3-211ENST00000541990 KIF14Q15058 1648 aa12.91□□□□□ -0.34
THBS3-211ENST00000541990 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
THBS3-211ENST00000541990 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
THBS3-211ENST00000541990 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
THBS3-211ENST00000541990 ABCA8O94911 1581 aa12.88□□□□□ -0.35
THBS3-211ENST00000541990 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
THBS3-211ENST00000541990 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
THBS3-211ENST00000541990 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
THBS3-211ENST00000541990 NEFLP07196 543 aa12.85□□□□□ -0.35
THBS3-211ENST00000541990 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
THBS3-211ENST00000541990 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
THBS3-211ENST00000541990 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
THBS3-211ENST00000541990 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
THBS3-211ENST00000541990 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
THBS3-211ENST00000541990 ABCC5O15440 1437 aa12.8□□□□□ -0.36
THBS3-211ENST00000541990 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
THBS3-211ENST00000541990 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
THBS3-211ENST00000541990 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
THBS3-211ENST00000541990 NAIPQ13075 1403 aa12.78□□□□□ -0.36
THBS3-211ENST00000541990 KDM6BO15054 1643 aa12.77□□□□□ -0.37
THBS3-211ENST00000541990 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
THBS3-211ENST00000541990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
THBS3-211ENST00000541990 DAPK1P53355 1430 aa12.76□□□□□ -0.37
THBS3-211ENST00000541990 ABCC10Q5T3U5 1492 aa12.75□□□□□ -0.37
THBS3-211ENST00000541990 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
THBS3-211ENST00000541990 ANP32CO43423 234 aa12.75□□□□□ -0.37
THBS3-211ENST00000541990 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
THBS3-211ENST00000541990 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
THBS3-211ENST00000541990 MIA2Q96PC5 1412 aa12.73□□□□□ -0.37
THBS3-211ENST00000541990 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
THBS3-211ENST00000541990 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
THBS3-211ENST00000541990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
THBS3-211ENST00000541990 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
THBS3-211ENST00000541990 ZCCHC11Q5TAX3 1644 aaKnown RBP12.72□□□□□ -0.37
THBS3-211ENST00000541990 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
THBS3-211ENST00000541990 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
THBS3-211ENST00000541990 TCOF1Q13428 1488 aaKnown RBP12.71□□□□□ -0.37
THBS3-211ENST00000541990 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.38
THBS3-211ENST00000541990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.7□□□□□ -0.38
THBS3-211ENST00000541990 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
THBS3-211ENST00000541990 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
THBS3-211ENST00000541990 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
THBS3-211ENST00000541990 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
THBS3-211ENST00000541990 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
THBS3-211ENST00000541990 ARHGEF12Q9NZN5 1544 aa12.68□□□□□ -0.38
THBS3-211ENST00000541990 CDC42BPAQ5VT25 1732 aa12.67□□□□□ -0.38
THBS3-211ENST00000541990 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
THBS3-211ENST00000541990 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
THBS3-211ENST00000541990 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
THBS3-211ENST00000541990 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
THBS3-211ENST00000541990 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
THBS3-211ENST00000541990 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
THBS3-211ENST00000541990 FAM69CQ0P6D2 419 aa12.65□□□□□ -0.38
THBS3-211ENST00000541990 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
THBS3-211ENST00000541990 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
THBS3-211ENST00000541990 MBD5Q9P267 1494 aa12.65□□□□□ -0.39
THBS3-211ENST00000541990 PKD2Q13563 968 aa12.64□□□□□ -0.39
THBS3-211ENST00000541990 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
THBS3-211ENST00000541990 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
THBS3-211ENST00000541990 KIF15Q9NS87 1388 aa12.64□□□□□ -0.39
THBS3-211ENST00000541990 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
THBS3-211ENST00000541990 CDC42BPBQ9Y5S2 1711 aa12.63□□□□□ -0.39
THBS3-211ENST00000541990 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
THBS3-211ENST00000541990 PLCH2O75038 1416 aa12.62□□□□□ -0.39
THBS3-211ENST00000541990 NUP155O75694 1391 aa12.62□□□□□ -0.39
THBS3-211ENST00000541990 ANKRD30AQ9BXX3 1397 aa12.62□□□□□ -0.39
THBS3-211ENST00000541990 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
THBS3-211ENST00000541990 DNMT1P26358 1616 aaKnown RBP12.61□□□□□ -0.39
THBS3-211ENST00000541990 ANKRD50Q9ULJ7 1429 aa12.61□□□□□ -0.39
THBS3-211ENST00000541990 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
THBS3-211ENST00000541990 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
THBS3-211ENST00000541990 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
THBS3-211ENST00000541990 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
THBS3-211ENST00000541990 TONSLQ96HA7 1378 aa12.59□□□□□ -0.39
THBS3-211ENST00000541990 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
THBS3-211ENST00000541990 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
THBS3-211ENST00000541990 FANCAO15360 1455 aa12.58□□□□□ -0.39
THBS3-211ENST00000541990 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
THBS3-211ENST00000541990 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
THBS3-211ENST00000541990 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
THBS3-211ENST00000541990 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
THBS3-211ENST00000541990 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
THBS3-211ENST00000541990 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
THBS3-211ENST00000541990 PLEKHH2Q8IVE3 1493 aa12.57□□□□□ -0.4
THBS3-211ENST00000541990 KIF3BO15066 747 aa12.56□□□□□ -0.4
THBS3-211ENST00000541990 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
THBS3-211ENST00000541990 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
THBS3-211ENST00000541990 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
THBS3-211ENST00000541990 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
THBS3-211ENST00000541990 NBR1Q14596 966 aa12.55□□□□□ -0.4
THBS3-211ENST00000541990 GGT6Q6P531 493 aa12.55□□□□□ -0.4
THBS3-211ENST00000541990 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms