RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
GABARAPL1-210ENST00000541960 KDM6BO15054 1643 aa25.83■■□□□ 1.73
GABARAPL1-210ENST00000541960 CDC42BPAQ5VT25 1732 aa25.83■■□□□ 1.73
GABARAPL1-210ENST00000541960 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
GABARAPL1-210ENST00000541960 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
GABARAPL1-210ENST00000541960 ROCK1Q13464 1354 aa25.78■■□□□ 1.72
GABARAPL1-210ENST00000541960 UHRF1BP1LA0JNW5 1464 aa25.72■■□□□ 1.71
GABARAPL1-210ENST00000541960 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
GABARAPL1-210ENST00000541960 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
GABARAPL1-210ENST00000541960 CROCC2H7BZ55 1655 aa25.7■■□□□ 1.7
GABARAPL1-210ENST00000541960 DENND4BO75064 1496 aaPredicted RBP25.7■■□□□ 1.7
GABARAPL1-210ENST00000541960 ZCCHC11Q5TAX3 1644 aaKnown RBP25.69■■□□□ 1.7
GABARAPL1-210ENST00000541960 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
GABARAPL1-210ENST00000541960 KDM5BQ9UGL1 1544 aa25.67■■□□□ 1.7
GABARAPL1-210ENST00000541960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.66■■□□□ 1.7
GABARAPL1-210ENST00000541960 CDC42BPBQ9Y5S2 1711 aa25.66■■□□□ 1.7
GABARAPL1-210ENST00000541960 PREX2Q70Z35 1606 aa25.66■■□□□ 1.7
GABARAPL1-210ENST00000541960 NCOA1Q15788 1441 aa25.66■■□□□ 1.7
GABARAPL1-210ENST00000541960 ADGRL2O95490 1459 aa25.64■■□□□ 1.7
GABARAPL1-210ENST00000541960 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.7
GABARAPL1-210ENST00000541960 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
GABARAPL1-210ENST00000541960 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
GABARAPL1-210ENST00000541960 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
GABARAPL1-210ENST00000541960 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
GABARAPL1-210ENST00000541960 HNRNPMP52272 730 aaKnown RBP eCLIP25.58■■□□□ 1.69
GABARAPL1-210ENST00000541960 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
GABARAPL1-210ENST00000541960 SHANK2Q9UPX8 1470 aa25.58■■□□□ 1.68
GABARAPL1-210ENST00000541960 MPHOSPH9Q99550 1183 aa25.57■■□□□ 1.68
GABARAPL1-210ENST00000541960 TIMELESSQ9UNS1 1208 aa25.57■■□□□ 1.68
GABARAPL1-210ENST00000541960 C9orf84Q5VXU9 1444 aa25.56■■□□□ 1.68
GABARAPL1-210ENST00000541960 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
GABARAPL1-210ENST00000541960 ANKRD30AQ9BXX3 1397 aa25.55■■□□□ 1.68
GABARAPL1-210ENST00000541960 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
GABARAPL1-210ENST00000541960 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
GABARAPL1-210ENST00000541960 FOXD1Q16676 465 aa25.5■■□□□ 1.67
GABARAPL1-210ENST00000541960 PPP1R15AO75807 674 aaPredicted RBP25.5■■□□□ 1.67
GABARAPL1-210ENST00000541960 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
GABARAPL1-210ENST00000541960 CCDC141Q6ZP82 1450 aa25.49■■□□□ 1.67
GABARAPL1-210ENST00000541960 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
GABARAPL1-210ENST00000541960 TSPY4P0CV99 314 aa25.47■■□□□ 1.67
GABARAPL1-210ENST00000541960 TSPY10P0CW01 314 aa25.47■■□□□ 1.67
GABARAPL1-210ENST00000541960 ANKRD50Q9ULJ7 1429 aa25.47■■□□□ 1.67
GABARAPL1-210ENST00000541960 PZPP20742 1482 aa25.47■■□□□ 1.67
GABARAPL1-210ENST00000541960 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
GABARAPL1-210ENST00000541960 PLCH2O75038 1416 aa25.46■■□□□ 1.67
GABARAPL1-210ENST00000541960 WDR7Q9Y4E6 1490 aa25.43■■□□□ 1.66
GABARAPL1-210ENST00000541960 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
GABARAPL1-210ENST00000541960 SLC4A1APQ9BWU0 796 aaKnown RBP25.42■■□□□ 1.66
GABARAPL1-210ENST00000541960 KIF15Q9NS87 1388 aa25.42■■□□□ 1.66
GABARAPL1-210ENST00000541960 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
GABARAPL1-210ENST00000541960 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
GABARAPL1-210ENST00000541960 RSPH4AQ5TD94 716 aa25.41■■□□□ 1.66
GABARAPL1-210ENST00000541960 PLEKHH2Q8IVE3 1493 aa25.37■■□□□ 1.65
GABARAPL1-210ENST00000541960 MAST1Q9Y2H9 1570 aa25.36■■□□□ 1.65
GABARAPL1-210ENST00000541960 EFCAB2Q5VUJ9 269 aa25.35■■□□□ 1.65
GABARAPL1-210ENST00000541960 ASXL2Q76L83 1435 aa25.35■■□□□ 1.65
GABARAPL1-210ENST00000541960 ABCC1P33527 1531 aa25.34■■□□□ 1.65
GABARAPL1-210ENST00000541960 MIER1Q8N108 512 aa25.31■■□□□ 1.64
GABARAPL1-210ENST00000541960 RPRD2Q5VT52 1461 aaKnown RBP25.31■■□□□ 1.64
GABARAPL1-210ENST00000541960 ARAP3Q8WWN8 1544 aa25.31■■□□□ 1.64
GABARAPL1-210ENST00000541960 NUP155O75694 1391 aa25.3■■□□□ 1.64
GABARAPL1-210ENST00000541960 ABCA9Q8IUA7 1624 aa25.3■■□□□ 1.64
GABARAPL1-210ENST00000541960 KDM5DQ9BY66 1539 aa25.29■■□□□ 1.64
GABARAPL1-210ENST00000541960 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
GABARAPL1-210ENST00000541960 PKD2Q13563 968 aa25.27■■□□□ 1.64
GABARAPL1-210ENST00000541960 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
GABARAPL1-210ENST00000541960 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
GABARAPL1-210ENST00000541960 TEX14Q8IWB6 1497 aa25.24■■□□□ 1.63
GABARAPL1-210ENST00000541960 HIRIP3Q9BW71 556 aaPredicted RBP25.22■■□□□ 1.63
GABARAPL1-210ENST00000541960 FANCAO15360 1455 aa25.21■■□□□ 1.63
GABARAPL1-210ENST00000541960 NPM1P06748 294 aaKnown RBP eCLIP25.19■■□□□ 1.62
GABARAPL1-210ENST00000541960 AFAP1Q8N556 730 aa25.18■■□□□ 1.62
GABARAPL1-210ENST00000541960 FAM135AQ9P2D6 1515 aa25.17■■□□□ 1.62
GABARAPL1-210ENST00000541960 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
GABARAPL1-210ENST00000541960 UNC13BO14795 1591 aa25.17■■□□□ 1.62
GABARAPL1-210ENST00000541960 ZFYVE16Q7Z3T8 1539 aa25.14■■□□□ 1.61
GABARAPL1-210ENST00000541960 SPAG9O60271 1321 aaKnown RBP25.12■■□□□ 1.61
GABARAPL1-210ENST00000541960 ERBINQ96RT1 1412 aa25.12■■□□□ 1.61
GABARAPL1-210ENST00000541960 NBPF8Q3BBV2 869 aa25.11■■□□□ 1.61
GABARAPL1-210ENST00000541960 ADGRL1O94910 1474 aa25.11■■□□□ 1.61
GABARAPL1-210ENST00000541960 RTEL1-TNFRSF6BF6WH68 1400 aa25.11■■□□□ 1.61
GABARAPL1-210ENST00000541960 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
GABARAPL1-210ENST00000541960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.61
GABARAPL1-210ENST00000541960 MAGI2Q86UL8 1455 aa25.08■■□□□ 1.61
GABARAPL1-210ENST00000541960 IQGAP3Q86VI3 1631 aa25.07■■□□□ 1.6
GABARAPL1-210ENST00000541960 INO80Q9ULG1 1556 aaPredicted RBP25.06■■□□□ 1.6
GABARAPL1-210ENST00000541960 CD109Q6YHK3 1445 aa25.04■■□□□ 1.6
GABARAPL1-210ENST00000541960 ATP7AQ04656 1500 aa25.04■■□□□ 1.6
GABARAPL1-210ENST00000541960 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
GABARAPL1-210ENST00000541960 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
GABARAPL1-210ENST00000541960 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
GABARAPL1-210ENST00000541960 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
GABARAPL1-210ENST00000541960 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
GABARAPL1-210ENST00000541960 HSPA5P11021 654 aaKnown RBP25.01■■□□□ 1.59
GABARAPL1-210ENST00000541960 PLA2R1Q13018 1463 aa25.01■■□□□ 1.59
GABARAPL1-210ENST00000541960 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
GABARAPL1-210ENST00000541960 YTHDC1Q96MU7 727 aaKnown RBP24.94■■□□□ 1.58
GABARAPL1-210ENST00000541960 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
GABARAPL1-210ENST00000541960 ZNF518AQ6AHZ1 1483 aa24.93■■□□□ 1.58
GABARAPL1-210ENST00000541960 CFAP74Q9C0B2 1584 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms