RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 CEP170Q5SW79 1584 aa12.2□□□□□ -0.46
CLDN2-203ENST00000541806 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
CLDN2-203ENST00000541806 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
CLDN2-203ENST00000541806 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
CLDN2-203ENST00000541806 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
CLDN2-203ENST00000541806 TCOF1Q13428 1488 aaKnown RBP12.18□□□□□ -0.46
CLDN2-203ENST00000541806 KDM6BO15054 1643 aa12.18□□□□□ -0.46
CLDN2-203ENST00000541806 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
CLDN2-203ENST00000541806 DAPK1P53355 1430 aa12.17□□□□□ -0.46
CLDN2-203ENST00000541806 ABCC5O15440 1437 aa12.16□□□□□ -0.46
CLDN2-203ENST00000541806 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
CLDN2-203ENST00000541806 ANP32CO43423 234 aa12.15□□□□□ -0.46
CLDN2-203ENST00000541806 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
CLDN2-203ENST00000541806 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
CLDN2-203ENST00000541806 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
CLDN2-203ENST00000541806 NUP160Q12769 1436 aa12.13□□□□□ -0.47
CLDN2-203ENST00000541806 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
CLDN2-203ENST00000541806 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLDN2-203ENST00000541806 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
CLDN2-203ENST00000541806 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
CLDN2-203ENST00000541806 PTPRGP23470 1445 aa12.1□□□□□ -0.47
CLDN2-203ENST00000541806 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
CLDN2-203ENST00000541806 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
CLDN2-203ENST00000541806 KIF14Q15058 1648 aa12.1□□□□□ -0.47
CLDN2-203ENST00000541806 POLR3GLQ9BT43 218 aa12.09□□□□□ -0.47
CLDN2-203ENST00000541806 EIF4G2P78344 907 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLDN2-203ENST00000541806 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
CLDN2-203ENST00000541806 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
CLDN2-203ENST00000541806 PKD2Q13563 968 aa12.08□□□□□ -0.48
CLDN2-203ENST00000541806 ATP10BO94823 1461 aa12.08□□□□□ -0.48
CLDN2-203ENST00000541806 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
CLDN2-203ENST00000541806 AKNAQ7Z591 1439 aa12.07□□□□□ -0.48
CLDN2-203ENST00000541806 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
CLDN2-203ENST00000541806 GCC2Q8IWJ2 1684 aa12.07□□□□□ -0.48
CLDN2-203ENST00000541806 ANKRD30BQ9BXX2 1392 aa12.05□□□□□ -0.48
CLDN2-203ENST00000541806 DNMT1P26358 1616 aaKnown RBP12.05□□□□□ -0.48
CLDN2-203ENST00000541806 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
CLDN2-203ENST00000541806 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
CLDN2-203ENST00000541806 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
CLDN2-203ENST00000541806 BCANQ96GW7 911 aa12.04□□□□□ -0.48
CLDN2-203ENST00000541806 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
CLDN2-203ENST00000541806 KDM5BQ9UGL1 1544 aa12.03□□□□□ -0.48
CLDN2-203ENST00000541806 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
CLDN2-203ENST00000541806 NUP155O75694 1391 aa12.03□□□□□ -0.48
CLDN2-203ENST00000541806 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
CLDN2-203ENST00000541806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLDN2-203ENST00000541806 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.48
CLDN2-203ENST00000541806 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
CLDN2-203ENST00000541806 ABCA8O94911 1581 aa12□□□□□ -0.49
CLDN2-203ENST00000541806 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
CLDN2-203ENST00000541806 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
CLDN2-203ENST00000541806 PZPP20742 1482 aa11.98□□□□□ -0.49
CLDN2-203ENST00000541806 RPRD2Q5VT52 1461 aaKnown RBP11.98□□□□□ -0.49
CLDN2-203ENST00000541806 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
CLDN2-203ENST00000541806 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
CLDN2-203ENST00000541806 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLDN2-203ENST00000541806 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
CLDN2-203ENST00000541806 FKBP8Q14318 412 aa11.96□□□□□ -0.49
CLDN2-203ENST00000541806 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.5
CLDN2-203ENST00000541806 RGL3Q3MIN7 710 aa11.95□□□□□ -0.5
CLDN2-203ENST00000541806 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
CLDN2-203ENST00000541806 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
CLDN2-203ENST00000541806 CHD1O14646 1710 aa11.95□□□□□ -0.5
CLDN2-203ENST00000541806 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
CLDN2-203ENST00000541806 DCAF11Q8TEB1 546 aa11.94□□□□□ -0.5
CLDN2-203ENST00000541806 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
CLDN2-203ENST00000541806 CCDC7Q96M83 1385 aa11.93□□□□□ -0.5
CLDN2-203ENST00000541806 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
CLDN2-203ENST00000541806 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
CLDN2-203ENST00000541806 CDC42BPAQ5VT25 1732 aa11.93□□□□□ -0.5
CLDN2-203ENST00000541806 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
CLDN2-203ENST00000541806 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
CLDN2-203ENST00000541806 ADGRL2O95490 1459 aa11.92□□□□□ -0.5
CLDN2-203ENST00000541806 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
CLDN2-203ENST00000541806 NEFLP07196 543 aa11.91□□□□□ -0.5
CLDN2-203ENST00000541806 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
CLDN2-203ENST00000541806 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
CLDN2-203ENST00000541806 CNTLNQ9NXG0 1405 aa11.89□□□□□ -0.51
CLDN2-203ENST00000541806 ADGBQ8N7X0 1667 aa11.89□□□□□ -0.51
CLDN2-203ENST00000541806 USP47Q96K76 1375 aa11.89□□□□□ -0.51
CLDN2-203ENST00000541806 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
CLDN2-203ENST00000541806 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
CLDN2-203ENST00000541806 PRKRIP1Q9H875 184 aaPredicted RBP11.88□□□□□ -0.51
CLDN2-203ENST00000541806 CCDC141Q6ZP82 1450 aa11.88□□□□□ -0.51
CLDN2-203ENST00000541806 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
CLDN2-203ENST00000541806 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
CLDN2-203ENST00000541806 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
CLDN2-203ENST00000541806 SAMD9LQ8IVG5 1584 aa11.86□□□□□ -0.51
CLDN2-203ENST00000541806 EFCAB2Q5VUJ9 269 aa11.85□□□□□ -0.51
CLDN2-203ENST00000541806 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
CLDN2-203ENST00000541806 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
CLDN2-203ENST00000541806 AFAP1Q8N556 730 aa11.85□□□□□ -0.51
CLDN2-203ENST00000541806 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
CLDN2-203ENST00000541806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLDN2-203ENST00000541806 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
CLDN2-203ENST00000541806 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
CLDN2-203ENST00000541806 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
CLDN2-203ENST00000541806 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
CLDN2-203ENST00000541806 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
CLDN2-203ENST00000541806 ROCK2O75116 1388 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms