RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 CHIC2Q9UKJ5 165 aa29.39■■■□□ 2.3
OTUB1-210ENST00000541478 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
OTUB1-210ENST00000541478 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
OTUB1-210ENST00000541478 CDC42BPAQ5VT25 1732 aa29.36■■■□□ 2.29
OTUB1-210ENST00000541478 ZNF644Q9H582 1327 aaPredicted RBP29.35■■■□□ 2.29
OTUB1-210ENST00000541478 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
OTUB1-210ENST00000541478 TIMELESSQ9UNS1 1208 aa29.3■■■□□ 2.28
OTUB1-210ENST00000541478 DIEXFQ68CQ4 756 aaKnown RBP29.29■■■□□ 2.28
OTUB1-210ENST00000541478 ZNF777Q9ULD5 760 aaPredicted RBP29.27■■■□□ 2.28
OTUB1-210ENST00000541478 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.28
OTUB1-210ENST00000541478 ADGBQ8N7X0 1667 aa29.25■■■□□ 2.27
OTUB1-210ENST00000541478 ADGRL2O95490 1459 aa29.22■■■□□ 2.27
OTUB1-210ENST00000541478 PREX2Q70Z35 1606 aa29.22■■■□□ 2.27
OTUB1-210ENST00000541478 KDM6BO15054 1643 aa29.21■■■□□ 2.27
OTUB1-210ENST00000541478 KDM5BQ9UGL1 1544 aa29.21■■■□□ 2.27
OTUB1-210ENST00000541478 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.27
OTUB1-210ENST00000541478 SHANK2Q9UPX8 1470 aa29.2■■■□□ 2.26
OTUB1-210ENST00000541478 ZCCHC11Q5TAX3 1644 aaKnown RBP29.19■■■□□ 2.26
OTUB1-210ENST00000541478 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
OTUB1-210ENST00000541478 DNAJC5Q9H3Z4 198 aa29.18■■■□□ 2.26
OTUB1-210ENST00000541478 NCOA1Q15788 1441 aa29.17■■■□□ 2.26
OTUB1-210ENST00000541478 TRIM52Q96A61 297 aa29.17■■■□□ 2.26
OTUB1-210ENST00000541478 ANKRD30AQ9BXX3 1397 aa29.16■■■□□ 2.26
OTUB1-210ENST00000541478 ARHGEF5Q12774 1597 aa29.15■■■□□ 2.26
OTUB1-210ENST00000541478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.14■■■□□ 2.26
OTUB1-210ENST00000541478 CDC42BPBQ9Y5S2 1711 aa29.14■■■□□ 2.26
OTUB1-210ENST00000541478 TTC37Q6PGP7 1564 aa29.13■■■□□ 2.25
OTUB1-210ENST00000541478 RIMBP3CA6NJZ7 1639 aa29.1■■■□□ 2.25
OTUB1-210ENST00000541478 RIMBP3BA6NNM3 1639 aa29.1■■■□□ 2.25
OTUB1-210ENST00000541478 RIMBP3Q9UFD9 1639 aa29.1■■■□□ 2.25
OTUB1-210ENST00000541478 SAMD9LQ8IVG5 1584 aa29.09■■■□□ 2.25
OTUB1-210ENST00000541478 C9orf84Q5VXU9 1444 aa29.09■■■□□ 2.25
OTUB1-210ENST00000541478 MYO5CQ9NQX4 1742 aa29.09■■■□□ 2.25
OTUB1-210ENST00000541478 TONSLQ96HA7 1378 aa29.09■■■□□ 2.25
OTUB1-210ENST00000541478 TSPY4P0CV99 314 aa29.08■■■□□ 2.25
OTUB1-210ENST00000541478 TSPY10P0CW01 314 aa29.08■■■□□ 2.25
OTUB1-210ENST00000541478 RSPH4AQ5TD94 716 aa29.08■■■□□ 2.25
OTUB1-210ENST00000541478 ARHGAP5Q13017 1502 aa29.08■■■□□ 2.25
OTUB1-210ENST00000541478 MPHOSPH9Q99550 1183 aa29.07■■■□□ 2.24
OTUB1-210ENST00000541478 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
OTUB1-210ENST00000541478 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
OTUB1-210ENST00000541478 DENND4BO75064 1496 aaPredicted RBP29.05■■■□□ 2.24
OTUB1-210ENST00000541478 PLEKHH2Q8IVE3 1493 aa29.04■■■□□ 2.24
OTUB1-210ENST00000541478 ANKRD50Q9ULJ7 1429 aa29■■■□□ 2.23
OTUB1-210ENST00000541478 HNRNPMP52272 730 aaKnown RBP eCLIP28.99■■■□□ 2.23
OTUB1-210ENST00000541478 KCNH8Q96L42 1107 aa28.99■■■□□ 2.23
OTUB1-210ENST00000541478 PPP1R15AO75807 674 aaPredicted RBP28.99■■■□□ 2.23
OTUB1-210ENST00000541478 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
OTUB1-210ENST00000541478 PLCH2O75038 1416 aa28.97■■■□□ 2.23
OTUB1-210ENST00000541478 SYCP2Q9BX26 1530 aa28.97■■■□□ 2.23
OTUB1-210ENST00000541478 WDR7Q9Y4E6 1490 aa28.95■■■□□ 2.22
OTUB1-210ENST00000541478 SLC4A1APQ9BWU0 796 aaKnown RBP28.94■■■□□ 2.22
OTUB1-210ENST00000541478 MAST1Q9Y2H9 1570 aa28.93■■■□□ 2.22
OTUB1-210ENST00000541478 KIF15Q9NS87 1388 aa28.93■■■□□ 2.22
OTUB1-210ENST00000541478 ARAP3Q8WWN8 1544 aa28.92■■■□□ 2.22
OTUB1-210ENST00000541478 PZPP20742 1482 aa28.9■■■□□ 2.22
OTUB1-210ENST00000541478 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
OTUB1-210ENST00000541478 EFCAB2Q5VUJ9 269 aa28.9■■■□□ 2.22
OTUB1-210ENST00000541478 ANKRD30BQ9BXX2 1392 aa28.88■■■□□ 2.21
OTUB1-210ENST00000541478 KDM5DQ9BY66 1539 aa28.84■■■□□ 2.21
OTUB1-210ENST00000541478 ABCC1P33527 1531 aa28.83■■■□□ 2.21
OTUB1-210ENST00000541478 RPRD2Q5VT52 1461 aaKnown RBP28.82■■■□□ 2.2
OTUB1-210ENST00000541478 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
OTUB1-210ENST00000541478 FOXD1Q16676 465 aa28.8■■■□□ 2.2
OTUB1-210ENST00000541478 ABCA9Q8IUA7 1624 aa28.8■■■□□ 2.2
OTUB1-210ENST00000541478 ASXL2Q76L83 1435 aa28.79■■■□□ 2.2
OTUB1-210ENST00000541478 ARHGEF12Q9NZN5 1544 aa28.78■■■□□ 2.2
OTUB1-210ENST00000541478 NPM1P06748 294 aaKnown RBP eCLIP28.78■■■□□ 2.2
OTUB1-210ENST00000541478 NUP155O75694 1391 aa28.78■■■□□ 2.2
OTUB1-210ENST00000541478 PKD2Q13563 968 aa28.72■■■□□ 2.19
OTUB1-210ENST00000541478 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
OTUB1-210ENST00000541478 FANCAO15360 1455 aa28.69■■■□□ 2.18
OTUB1-210ENST00000541478 MIER1Q8N108 512 aa28.69■■■□□ 2.18
OTUB1-210ENST00000541478 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
OTUB1-210ENST00000541478 ERBINQ96RT1 1412 aa28.67■■■□□ 2.18
OTUB1-210ENST00000541478 UNC13BO14795 1591 aa28.67■■■□□ 2.18
OTUB1-210ENST00000541478 TRAPPC8Q9Y2L5 1435 aa28.67■■■□□ 2.18
OTUB1-210ENST00000541478 L3MBTL2Q969R5 705 aa28.66■■■□□ 2.18
OTUB1-210ENST00000541478 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
OTUB1-210ENST00000541478 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.18
OTUB1-210ENST00000541478 SPAG9O60271 1321 aaKnown RBP28.6■■■□□ 2.17
OTUB1-210ENST00000541478 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
OTUB1-210ENST00000541478 ADGRL1O94910 1474 aa28.58■■■□□ 2.17
OTUB1-210ENST00000541478 IQGAP3Q86VI3 1631 aa28.56■■■□□ 2.16
OTUB1-210ENST00000541478 MAGI2Q86UL8 1455 aa28.56■■■□□ 2.16
OTUB1-210ENST00000541478 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
OTUB1-210ENST00000541478 AFAP1Q8N556 730 aa28.53■■■□□ 2.16
OTUB1-210ENST00000541478 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
OTUB1-210ENST00000541478 INO80Q9ULG1 1556 aaPredicted RBP28.52■■■□□ 2.16
OTUB1-210ENST00000541478 ATP7AQ04656 1500 aa28.51■■■□□ 2.15
OTUB1-210ENST00000541478 CD109Q6YHK3 1445 aa28.49■■■□□ 2.15
OTUB1-210ENST00000541478 CENPBP07199 599 aaPredicted RBP28.48■■■□□ 2.15
OTUB1-210ENST00000541478 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
OTUB1-210ENST00000541478 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
OTUB1-210ENST00000541478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.47■■■□□ 2.157e-7■□□□□ 11.3
OTUB1-210ENST00000541478 ZNF518AQ6AHZ1 1483 aa28.44■■■□□ 2.14
OTUB1-210ENST00000541478 DDX10Q13206 875 aaKnown RBP28.43■■■□□ 2.14
OTUB1-210ENST00000541478 NBPF8Q3BBV2 869 aa28.43■■■□□ 2.14
OTUB1-210ENST00000541478 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
OTUB1-210ENST00000541478 HSPA5P11021 654 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms