RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
CLPTM1-202ENST00000541297 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
CLPTM1-202ENST00000541297 KDM5BQ9UGL1 1544 aa22.42■■□□□ 1.18
CLPTM1-202ENST00000541297 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
CLPTM1-202ENST00000541297 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
CLPTM1-202ENST00000541297 HFM1A2PYH4 1435 aa22.41■■□□□ 1.18
CLPTM1-202ENST00000541297 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-202ENST00000541297 DAPK1P53355 1430 aa22.4■■□□□ 1.18
CLPTM1-202ENST00000541297 NAIPQ13075 1403 aa22.39■■□□□ 1.17
CLPTM1-202ENST00000541297 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.17
CLPTM1-202ENST00000541297 ABCC5O15440 1437 aa22.37■■□□□ 1.17
CLPTM1-202ENST00000541297 CDC42BPBQ9Y5S2 1711 aa22.36■■□□□ 1.17
CLPTM1-202ENST00000541297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLPTM1-202ENST00000541297 PREX2Q70Z35 1606 aa22.34■■□□□ 1.17
CLPTM1-202ENST00000541297 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
CLPTM1-202ENST00000541297 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
CLPTM1-202ENST00000541297 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
CLPTM1-202ENST00000541297 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
CLPTM1-202ENST00000541297 KDM6BO15054 1643 aa22.3■■□□□ 1.16
CLPTM1-202ENST00000541297 CROCC2H7BZ55 1655 aa22.29■■□□□ 1.16
CLPTM1-202ENST00000541297 ARHGAP5Q13017 1502 aa22.28■■□□□ 1.16
CLPTM1-202ENST00000541297 SAMD9LQ8IVG5 1584 aa22.28■■□□□ 1.16
CLPTM1-202ENST00000541297 AKNAQ7Z591 1439 aa22.27■■□□□ 1.16
CLPTM1-202ENST00000541297 HNRNPMP52272 730 aaKnown RBP eCLIP22.26■■□□□ 1.153e-10■■■■■ 34.9
CLPTM1-202ENST00000541297 ZNF316A6NFI3 1004 aaPredicted RBP22.26■■□□□ 1.15
CLPTM1-202ENST00000541297 ADGBQ8N7X0 1667 aa22.25■■□□□ 1.15
CLPTM1-202ENST00000541297 WDR7Q9Y4E6 1490 aa22.24■■□□□ 1.15
CLPTM1-202ENST00000541297 ROCK1Q13464 1354 aa22.24■■□□□ 1.15
CLPTM1-202ENST00000541297 ASXL2Q76L83 1435 aa22.2■■□□□ 1.15
CLPTM1-202ENST00000541297 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
CLPTM1-202ENST00000541297 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
CLPTM1-202ENST00000541297 SYCP2Q9BX26 1530 aa22.19■■□□□ 1.14
CLPTM1-202ENST00000541297 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
CLPTM1-202ENST00000541297 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
CLPTM1-202ENST00000541297 PLCH2O75038 1416 aa22.18■■□□□ 1.14
CLPTM1-202ENST00000541297 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
CLPTM1-202ENST00000541297 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
CLPTM1-202ENST00000541297 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
CLPTM1-202ENST00000541297 TSPY4P0CV99 314 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 TSPY10P0CW01 314 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 ADGRL2O95490 1459 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
CLPTM1-202ENST00000541297 CYB5RLQ6IPT4 315 aa22.15■■□□□ 1.14
CLPTM1-202ENST00000541297 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
CLPTM1-202ENST00000541297 ANKRD30AQ9BXX3 1397 aa22.14■■□□□ 1.14
CLPTM1-202ENST00000541297 CCDC141Q6ZP82 1450 aa22.14■■□□□ 1.13
CLPTM1-202ENST00000541297 SHANK2Q9UPX8 1470 aa22.14■■□□□ 1.13
CLPTM1-202ENST00000541297 MYT1Q01538 1121 aa22.13■■□□□ 1.13
CLPTM1-202ENST00000541297 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
CLPTM1-202ENST00000541297 ABCA9Q8IUA7 1624 aa22.11■■□□□ 1.13
CLPTM1-202ENST00000541297 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
CLPTM1-202ENST00000541297 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
CLPTM1-202ENST00000541297 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
CLPTM1-202ENST00000541297 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
CLPTM1-202ENST00000541297 ABCC1P33527 1531 aa22.06■■□□□ 1.12
CLPTM1-202ENST00000541297 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
CLPTM1-202ENST00000541297 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
CLPTM1-202ENST00000541297 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
CLPTM1-202ENST00000541297 KIF15Q9NS87 1388 aa22.05■■□□□ 1.12
CLPTM1-202ENST00000541297 MIER1Q8N108 512 aa22.05■■□□□ 1.12
CLPTM1-202ENST00000541297 ARAP3Q8WWN8 1544 aa22.04■■□□□ 1.12
CLPTM1-202ENST00000541297 FANCAO15360 1455 aa22.03■■□□□ 1.12
CLPTM1-202ENST00000541297 FOXD1Q16676 465 aa22.03■■□□□ 1.12
CLPTM1-202ENST00000541297 TRAPPC8Q9Y2L5 1435 aa22.01■■□□□ 1.11
CLPTM1-202ENST00000541297 MAST1Q9Y2H9 1570 aa22■■□□□ 1.11
CLPTM1-202ENST00000541297 SLC4A1APQ9BWU0 796 aaKnown RBP22■■□□□ 1.11
CLPTM1-202ENST00000541297 AFAP1Q8N556 730 aa21.97■■□□□ 1.11
CLPTM1-202ENST00000541297 PZPP20742 1482 aa21.96■■□□□ 1.11
CLPTM1-202ENST00000541297 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
CLPTM1-202ENST00000541297 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
CLPTM1-202ENST00000541297 PLXNC1O60486 1568 aa21.94■■□□□ 1.1
CLPTM1-202ENST00000541297 NUP155O75694 1391 aa21.92■■□□□ 1.1
CLPTM1-202ENST00000541297 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
CLPTM1-202ENST00000541297 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
CLPTM1-202ENST00000541297 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
CLPTM1-202ENST00000541297 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
CLPTM1-202ENST00000541297 ZFYVE16Q7Z3T8 1539 aa21.88■■□□□ 1.09
CLPTM1-202ENST00000541297 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
CLPTM1-202ENST00000541297 PKD2Q13563 968 aa21.86■■□□□ 1.09
CLPTM1-202ENST00000541297 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
CLPTM1-202ENST00000541297 ANKRD30BQ9BXX2 1392 aa21.86■■□□□ 1.09
CLPTM1-202ENST00000541297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.092e-7■■□□□ 11.9
CLPTM1-202ENST00000541297 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
CLPTM1-202ENST00000541297 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-202ENST00000541297 ATP7AQ04656 1500 aa21.83■■□□□ 1.08
CLPTM1-202ENST00000541297 KDM5DQ9BY66 1539 aa21.83■■□□□ 1.08
CLPTM1-202ENST00000541297 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
CLPTM1-202ENST00000541297 RTEL1-TNFRSF6BF6WH68 1400 aa21.82■■□□□ 1.08
CLPTM1-202ENST00000541297 MAP3K4Q9Y6R4 1608 aa21.81■■□□□ 1.08
CLPTM1-202ENST00000541297 UNC13BO14795 1591 aa21.8■■□□□ 1.08
CLPTM1-202ENST00000541297 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
CLPTM1-202ENST00000541297 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
CLPTM1-202ENST00000541297 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
CLPTM1-202ENST00000541297 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
CLPTM1-202ENST00000541297 RPRD2Q5VT52 1461 aaKnown RBP21.77■■□□□ 1.08
CLPTM1-202ENST00000541297 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
CLPTM1-202ENST00000541297 TSPOAP1O95153 1857 aa21.77■■□□□ 1.07
CLPTM1-202ENST00000541297 KIDINS220Q9ULH0 1771 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms