RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
AP003559.1-201ENST00000540906 DAPK1P53355 1430 aa18.23■□□□□ 0.51
AP003559.1-201ENST00000540906 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
AP003559.1-201ENST00000540906 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
AP003559.1-201ENST00000540906 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
AP003559.1-201ENST00000540906 KDM6BO15054 1643 aa18.22■□□□□ 0.51
AP003559.1-201ENST00000540906 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
AP003559.1-201ENST00000540906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.2■□□□□ 0.5
AP003559.1-201ENST00000540906 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
AP003559.1-201ENST00000540906 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
AP003559.1-201ENST00000540906 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
AP003559.1-201ENST00000540906 RIMBP3CA6NJZ7 1639 aa18.19■□□□□ 0.5
AP003559.1-201ENST00000540906 RIMBP3BA6NNM3 1639 aa18.19■□□□□ 0.5
AP003559.1-201ENST00000540906 RIMBP3Q9UFD9 1639 aa18.19■□□□□ 0.5
AP003559.1-201ENST00000540906 PREX2Q70Z35 1606 aa18.17■□□□□ 0.5
AP003559.1-201ENST00000540906 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
AP003559.1-201ENST00000540906 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
AP003559.1-201ENST00000540906 KCNH8Q96L42 1107 aa18.14■□□□□ 0.5
AP003559.1-201ENST00000540906 SAMD9LQ8IVG5 1584 aa18.14■□□□□ 0.49
AP003559.1-201ENST00000540906 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
AP003559.1-201ENST00000540906 MYO5CQ9NQX4 1742 aa18.1■□□□□ 0.49
AP003559.1-201ENST00000540906 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
AP003559.1-201ENST00000540906 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
AP003559.1-201ENST00000540906 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
AP003559.1-201ENST00000540906 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
AP003559.1-201ENST00000540906 ARHGAP5Q13017 1502 aa18.07■□□□□ 0.48
AP003559.1-201ENST00000540906 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
AP003559.1-201ENST00000540906 DENND4BO75064 1496 aaPredicted RBP18.06■□□□□ 0.48
AP003559.1-201ENST00000540906 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
AP003559.1-201ENST00000540906 ARHGEF5Q12774 1597 aa18.05■□□□□ 0.48
AP003559.1-201ENST00000540906 NCOA1Q15788 1441 aa18.05■□□□□ 0.48
AP003559.1-201ENST00000540906 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
AP003559.1-201ENST00000540906 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
AP003559.1-201ENST00000540906 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
AP003559.1-201ENST00000540906 PLCH2O75038 1416 aa18.03■□□□□ 0.48
AP003559.1-201ENST00000540906 C9orf84Q5VXU9 1444 aa18.03■□□□□ 0.48
AP003559.1-201ENST00000540906 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
AP003559.1-201ENST00000540906 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
AP003559.1-201ENST00000540906 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
AP003559.1-201ENST00000540906 ABCA9Q8IUA7 1624 aa17.99■□□□□ 0.47
AP003559.1-201ENST00000540906 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
AP003559.1-201ENST00000540906 ANKRD30AQ9BXX3 1397 aa17.97■□□□□ 0.47
AP003559.1-201ENST00000540906 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
AP003559.1-201ENST00000540906 ABCC1P33527 1531 aa17.96■□□□□ 0.47
AP003559.1-201ENST00000540906 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
AP003559.1-201ENST00000540906 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
AP003559.1-201ENST00000540906 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
AP003559.1-201ENST00000540906 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
AP003559.1-201ENST00000540906 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
AP003559.1-201ENST00000540906 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
AP003559.1-201ENST00000540906 PZPP20742 1482 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 FOXD1Q16676 465 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 MPHOSPH9Q99550 1183 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
AP003559.1-201ENST00000540906 KIF15Q9NS87 1388 aa17.91■□□□□ 0.46
AP003559.1-201ENST00000540906 FANCAO15360 1455 aa17.88■□□□□ 0.45
AP003559.1-201ENST00000540906 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
AP003559.1-201ENST00000540906 PLXNC1O60486 1568 aa17.85■□□□□ 0.45
AP003559.1-201ENST00000540906 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
AP003559.1-201ENST00000540906 AFAP1Q8N556 730 aa17.84■□□□□ 0.45
AP003559.1-201ENST00000540906 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
AP003559.1-201ENST00000540906 ANKRD30BQ9BXX2 1392 aa17.82■□□□□ 0.44
AP003559.1-201ENST00000540906 ZFYVE16Q7Z3T8 1539 aa17.81■□□□□ 0.44
AP003559.1-201ENST00000540906 ADGRL1O94910 1474 aa17.81■□□□□ 0.44
AP003559.1-201ENST00000540906 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
AP003559.1-201ENST00000540906 CD109Q6YHK3 1445 aa17.8■□□□□ 0.44
AP003559.1-201ENST00000540906 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
AP003559.1-201ENST00000540906 NUP155O75694 1391 aa17.79■□□□□ 0.44
AP003559.1-201ENST00000540906 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
AP003559.1-201ENST00000540906 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
AP003559.1-201ENST00000540906 UNC13BO14795 1591 aa17.77■□□□□ 0.44
AP003559.1-201ENST00000540906 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
AP003559.1-201ENST00000540906 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.43
AP003559.1-201ENST00000540906 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
AP003559.1-201ENST00000540906 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
AP003559.1-201ENST00000540906 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
AP003559.1-201ENST00000540906 PKD2Q13563 968 aa17.75■□□□□ 0.43
AP003559.1-201ENST00000540906 TIMELESSQ9UNS1 1208 aa17.75■□□□□ 0.43
AP003559.1-201ENST00000540906 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
AP003559.1-201ENST00000540906 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
AP003559.1-201ENST00000540906 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
AP003559.1-201ENST00000540906 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
AP003559.1-201ENST00000540906 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
AP003559.1-201ENST00000540906 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
AP003559.1-201ENST00000540906 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
AP003559.1-201ENST00000540906 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
AP003559.1-201ENST00000540906 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
AP003559.1-201ENST00000540906 DIP2BQ9P265 1576 aa17.7■□□□□ 0.42
AP003559.1-201ENST00000540906 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
AP003559.1-201ENST00000540906 GLI2P10070 1586 aa17.7■□□□□ 0.42
AP003559.1-201ENST00000540906 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
AP003559.1-201ENST00000540906 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
AP003559.1-201ENST00000540906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
AP003559.1-201ENST00000540906 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
AP003559.1-201ENST00000540906 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
AP003559.1-201ENST00000540906 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
AP003559.1-201ENST00000540906 KDM5CP41229 1560 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms