RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
SFI1-229ENST00000540643 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
SFI1-229ENST00000540643 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
SFI1-229ENST00000540643 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
SFI1-229ENST00000540643 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
SFI1-229ENST00000540643 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
SFI1-229ENST00000540643 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
SFI1-229ENST00000540643 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
SFI1-229ENST00000540643 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
SFI1-229ENST00000540643 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
SFI1-229ENST00000540643 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
SFI1-229ENST00000540643 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
SFI1-229ENST00000540643 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
SFI1-229ENST00000540643 CCER2I3L3R5 266 aa16.56■□□□□ 0.24
SFI1-229ENST00000540643 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.56■□□□□ 0.24
SFI1-229ENST00000540643 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
SFI1-229ENST00000540643 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
SFI1-229ENST00000540643 ESPNB1AK53 854 aa16.53■□□□□ 0.24
SFI1-229ENST00000540643 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
SFI1-229ENST00000540643 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
SFI1-229ENST00000540643 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
SFI1-229ENST00000540643 CCDC66A2RUB6 948 aa16.5■□□□□ 0.23
SFI1-229ENST00000540643 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
SFI1-229ENST00000540643 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SFI1-229ENST00000540643 CBX1P83916 185 aa16.46■□□□□ 0.23
SFI1-229ENST00000540643 CALRP27797 417 aaKnown RBP16.46■□□□□ 0.23
SFI1-229ENST00000540643 GOLGA6L6A8MZA4 724 aa16.46■□□□□ 0.22
SFI1-229ENST00000540643 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
SFI1-229ENST00000540643 TRERF1Q96PN7 1200 aa16.44■□□□□ 0.22
SFI1-229ENST00000540643 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
SFI1-229ENST00000540643 KCNJ4P48050 445 aa16.43■□□□□ 0.22
SFI1-229ENST00000540643 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
SFI1-229ENST00000540643 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
SFI1-229ENST00000540643 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
SFI1-229ENST00000540643 UQCRHP07919 91 aa16.42■□□□□ 0.22
SFI1-229ENST00000540643 MRE11P49959 708 aa16.42■□□□□ 0.22
SFI1-229ENST00000540643 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
SFI1-229ENST00000540643 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
SFI1-229ENST00000540643 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
SFI1-229ENST00000540643 POGKQ9P215 609 aa16.4■□□□□ 0.22
SFI1-229ENST00000540643 TNNT1P13805 278 aa16.39■□□□□ 0.21
SFI1-229ENST00000540643 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.21
SFI1-229ENST00000540643 GOLGA6L1Q8N7Z2 621 aa16.38■□□□□ 0.21
SFI1-229ENST00000540643 CLCN1P35523 988 aa16.37■□□□□ 0.21
SFI1-229ENST00000540643 GBP4Q96PP9 640 aa16.37■□□□□ 0.21
SFI1-229ENST00000540643 FBLN2P98095 1184 aa16.37■□□□□ 0.21
SFI1-229ENST00000540643 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
SFI1-229ENST00000540643 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
SFI1-229ENST00000540643 EEA1Q15075 1411 aa16.36■□□□□ 0.21
SFI1-229ENST00000540643 FAM193AP78312 1265 aa16.36■□□□□ 0.21
SFI1-229ENST00000540643 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
SFI1-229ENST00000540643 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
SFI1-229ENST00000540643 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
SFI1-229ENST00000540643 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
SFI1-229ENST00000540643 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
SFI1-229ENST00000540643 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
SFI1-229ENST00000540643 WASHC2CQ9Y4E1 1318 aa16.34■□□□□ 0.21
SFI1-229ENST00000540643 ERICH4A6NGS2 130 aa16.33■□□□□ 0.21
SFI1-229ENST00000540643 GOLGA3Q08378 1498 aa16.33■□□□□ 0.2
SFI1-229ENST00000540643 CNPY4Q8N129 248 aa16.32■□□□□ 0.2
SFI1-229ENST00000540643 IGSF3O75054 1194 aa16.31■□□□□ 0.2
SFI1-229ENST00000540643 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
SFI1-229ENST00000540643 SMAP1Q8IYB5 467 aaPredicted RBP16.3■□□□□ 0.2
SFI1-229ENST00000540643 CLIP1P30622 1438 aa16.3■□□□□ 0.2
SFI1-229ENST00000540643 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
SFI1-229ENST00000540643 CLGNO14967 610 aa16.29■□□□□ 0.2
SFI1-229ENST00000540643 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
SFI1-229ENST00000540643 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
SFI1-229ENST00000540643 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
SFI1-229ENST00000540643 NCAPD3P42695 1498 aa16.27■□□□□ 0.2
SFI1-229ENST00000540643 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.19
SFI1-229ENST00000540643 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
SFI1-229ENST00000540643 MS4A1P11836 297 aa16.25■□□□□ 0.19
SFI1-229ENST00000540643 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
SFI1-229ENST00000540643 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
SFI1-229ENST00000540643 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
SFI1-229ENST00000540643 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
SFI1-229ENST00000540643 TRAK2O60296 914 aa16.24■□□□□ 0.19
SFI1-229ENST00000540643 LETM1O95202 739 aaPredicted RBP16.24■□□□□ 0.19
SFI1-229ENST00000540643 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
SFI1-229ENST00000540643 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
SFI1-229ENST00000540643 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
SFI1-229ENST00000540643 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
SFI1-229ENST00000540643 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
SFI1-229ENST00000540643 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
SFI1-229ENST00000540643 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
SFI1-229ENST00000540643 SECISBP2LQ93073 1101 aaKnown RBP16.21■□□□□ 0.19
SFI1-229ENST00000540643 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
SFI1-229ENST00000540643 STAC3Q96MF2 364 aa16.21■□□□□ 0.18
SFI1-229ENST00000540643 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
SFI1-229ENST00000540643 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
SFI1-229ENST00000540643 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
SFI1-229ENST00000540643 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
SFI1-229ENST00000540643 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
SFI1-229ENST00000540643 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms