RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
INO80E-203ENST00000540562 ANP32EQ9BTT0 268 aa19.47■□□□□ 0.71
INO80E-203ENST00000540562 MYT1Q01538 1121 aa19.46■□□□□ 0.71
INO80E-203ENST00000540562 PRKRIP1Q9H875 184 aaPredicted RBP19.45■□□□□ 0.7
INO80E-203ENST00000540562 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
INO80E-203ENST00000540562 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
INO80E-203ENST00000540562 PKD2Q13563 968 aa19.43■□□□□ 0.7
INO80E-203ENST00000540562 KIF7Q2M1P5 1343 aa19.43■□□□□ 0.7
INO80E-203ENST00000540562 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
INO80E-203ENST00000540562 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
INO80E-203ENST00000540562 CCDC7Q96M83 1385 aa19.4■□□□□ 0.7
INO80E-203ENST00000540562 TARBP1Q13395 1621 aaKnown RBP19.37■□□□□ 0.69
INO80E-203ENST00000540562 ABCC5O15440 1437 aa19.37■□□□□ 0.69
INO80E-203ENST00000540562 DAPK1P53355 1430 aa19.37■□□□□ 0.69
INO80E-203ENST00000540562 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
INO80E-203ENST00000540562 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
INO80E-203ENST00000540562 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
INO80E-203ENST00000540562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.696e-7■□□□□ 10.3
INO80E-203ENST00000540562 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
INO80E-203ENST00000540562 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
INO80E-203ENST00000540562 MSH5O43196 834 aa19.34■□□□□ 0.69
INO80E-203ENST00000540562 HNRNPMP52272 730 aaKnown RBP eCLIP19.34■□□□□ 0.69
INO80E-203ENST00000540562 NUP153P49790 1475 aaKnown RBP19.3■□□□□ 0.68
INO80E-203ENST00000540562 DCAF11Q8TEB1 546 aa19.3■□□□□ 0.68
INO80E-203ENST00000540562 WDR62O43379 1518 aa19.3■□□□□ 0.68
INO80E-203ENST00000540562 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
INO80E-203ENST00000540562 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
INO80E-203ENST00000540562 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
INO80E-203ENST00000540562 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
INO80E-203ENST00000540562 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
INO80E-203ENST00000540562 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
INO80E-203ENST00000540562 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
INO80E-203ENST00000540562 ERCC6Q03468 1493 aa19.27■□□□□ 0.68
INO80E-203ENST00000540562 NUP155O75694 1391 aa19.27■□□□□ 0.68
INO80E-203ENST00000540562 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.68
INO80E-203ENST00000540562 MIA2Q96PC5 1412 aa19.27■□□□□ 0.67
INO80E-203ENST00000540562 PLEKHD1A6NEE1 506 aa19.26■□□□□ 0.67
INO80E-203ENST00000540562 USP47Q96K76 1375 aa19.25■□□□□ 0.67
INO80E-203ENST00000540562 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
INO80E-203ENST00000540562 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
INO80E-203ENST00000540562 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
INO80E-203ENST00000540562 ST20-MTHFSA0A0A6YYL1 179 aa19.24■□□□□ 0.67
INO80E-203ENST00000540562 TMC1Q8TDI8 760 aa19.24■□□□□ 0.67
INO80E-203ENST00000540562 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
INO80E-203ENST00000540562 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
INO80E-203ENST00000540562 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
INO80E-203ENST00000540562 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
INO80E-203ENST00000540562 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
INO80E-203ENST00000540562 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
INO80E-203ENST00000540562 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
INO80E-203ENST00000540562 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
INO80E-203ENST00000540562 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
INO80E-203ENST00000540562 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
INO80E-203ENST00000540562 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
INO80E-203ENST00000540562 KIF14Q15058 1648 aa19.17■□□□□ 0.66
INO80E-203ENST00000540562 PZPP20742 1482 aa19.16■□□□□ 0.66
INO80E-203ENST00000540562 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
INO80E-203ENST00000540562 ANKRD50Q9ULJ7 1429 aa19.15■□□□□ 0.66
INO80E-203ENST00000540562 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.66
INO80E-203ENST00000540562 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.65
INO80E-203ENST00000540562 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.65
INO80E-203ENST00000540562 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
INO80E-203ENST00000540562 NBPF1Q3BBV0 1214 aa19.14■□□□□ 0.65
INO80E-203ENST00000540562 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
INO80E-203ENST00000540562 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
INO80E-203ENST00000540562 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
INO80E-203ENST00000540562 NBR1Q14596 966 aa19.12■□□□□ 0.65
INO80E-203ENST00000540562 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
INO80E-203ENST00000540562 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
INO80E-203ENST00000540562 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
INO80E-203ENST00000540562 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
INO80E-203ENST00000540562 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
INO80E-203ENST00000540562 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
INO80E-203ENST00000540562 SKAP1Q86WV1 359 aa19.06■□□□□ 0.64
INO80E-203ENST00000540562 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
INO80E-203ENST00000540562 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
INO80E-203ENST00000540562 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
INO80E-203ENST00000540562 MYT1LQ9UL68 1186 aa19.04■□□□□ 0.64
INO80E-203ENST00000540562 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
INO80E-203ENST00000540562 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
INO80E-203ENST00000540562 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
INO80E-203ENST00000540562 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
INO80E-203ENST00000540562 BCORL1Q5H9F3 1711 aa19.04■□□□□ 0.64
INO80E-203ENST00000540562 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
INO80E-203ENST00000540562 PLIN1O60240 522 aa19.03■□□□□ 0.64
INO80E-203ENST00000540562 CDCA7LQ96GN5 454 aa19.02■□□□□ 0.64
INO80E-203ENST00000540562 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
INO80E-203ENST00000540562 ATP10BO94823 1461 aa18.98■□□□□ 0.63
INO80E-203ENST00000540562 EXOC6Q8TAG9 804 aa18.98■□□□□ 0.63
INO80E-203ENST00000540562 BCL11AQ9H165 835 aa18.96■□□□□ 0.63
INO80E-203ENST00000540562 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
INO80E-203ENST00000540562 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
INO80E-203ENST00000540562 PTPRGP23470 1445 aa18.94■□□□□ 0.62
INO80E-203ENST00000540562 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
INO80E-203ENST00000540562 PANK3Q9H999 370 aa18.92■□□□□ 0.62
INO80E-203ENST00000540562 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
INO80E-203ENST00000540562 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.62
INO80E-203ENST00000540562 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
INO80E-203ENST00000540562 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
INO80E-203ENST00000540562 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms