RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
GABARAPL1-208ENST00000540424 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
GABARAPL1-208ENST00000540424 ARID3CA6NKF2 412 aa21.2■□□□□ 0.98
GABARAPL1-208ENST00000540424 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
GABARAPL1-208ENST00000540424 NUP160Q12769 1436 aa21.2■□□□□ 0.98
GABARAPL1-208ENST00000540424 DEKP35659 375 aaKnown RBP21.17■□□□□ 0.98
GABARAPL1-208ENST00000540424 DAPK1P53355 1430 aa21.17■□□□□ 0.98
GABARAPL1-208ENST00000540424 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
GABARAPL1-208ENST00000540424 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
GABARAPL1-208ENST00000540424 FBLN2P98095 1184 aa21.16■□□□□ 0.98
GABARAPL1-208ENST00000540424 DNMT1P26358 1616 aaKnown RBP21.16■□□□□ 0.98
GABARAPL1-208ENST00000540424 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
GABARAPL1-208ENST00000540424 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
GABARAPL1-208ENST00000540424 ERICH6BQ5W0A0 696 aa21.12■□□□□ 0.97
GABARAPL1-208ENST00000540424 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
GABARAPL1-208ENST00000540424 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
GABARAPL1-208ENST00000540424 ABCC5O15440 1437 aa21.11■□□□□ 0.97
GABARAPL1-208ENST00000540424 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
GABARAPL1-208ENST00000540424 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
GABARAPL1-208ENST00000540424 ANO8Q9HCE9 1232 aaPredicted RBP21.1■□□□□ 0.97
GABARAPL1-208ENST00000540424 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
GABARAPL1-208ENST00000540424 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
GABARAPL1-208ENST00000540424 KDM6BO15054 1643 aa21.08■□□□□ 0.96
GABARAPL1-208ENST00000540424 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.96
GABARAPL1-208ENST00000540424 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-208ENST00000540424 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-208ENST00000540424 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
GABARAPL1-208ENST00000540424 CAMSAP2Q08AD1 1489 aa21.04■□□□□ 0.96
GABARAPL1-208ENST00000540424 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
GABARAPL1-208ENST00000540424 ABCA8O94911 1581 aa21.02■□□□□ 0.96
GABARAPL1-208ENST00000540424 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.96
GABARAPL1-208ENST00000540424 ANP32CO43423 234 aa21.01■□□□□ 0.95
GABARAPL1-208ENST00000540424 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
GABARAPL1-208ENST00000540424 CCER2I3L3R5 266 aa21■□□□□ 0.95
GABARAPL1-208ENST00000540424 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
GABARAPL1-208ENST00000540424 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
GABARAPL1-208ENST00000540424 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
GABARAPL1-208ENST00000540424 ADGRL2O95490 1459 aa20.98■□□□□ 0.95
GABARAPL1-208ENST00000540424 KIF14Q15058 1648 aa20.98■□□□□ 0.95
GABARAPL1-208ENST00000540424 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
GABARAPL1-208ENST00000540424 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
GABARAPL1-208ENST00000540424 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
GABARAPL1-208ENST00000540424 NCOA1Q15788 1441 aa20.95■□□□□ 0.94
GABARAPL1-208ENST00000540424 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
GABARAPL1-208ENST00000540424 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
GABARAPL1-208ENST00000540424 CROCC2H7BZ55 1655 aa20.94■□□□□ 0.94
GABARAPL1-208ENST00000540424 ATP10BO94823 1461 aa20.93■□□□□ 0.94
GABARAPL1-208ENST00000540424 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
GABARAPL1-208ENST00000540424 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
GABARAPL1-208ENST00000540424 L3MBTL2Q969R5 705 aa20.9■□□□□ 0.94
GABARAPL1-208ENST00000540424 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
GABARAPL1-208ENST00000540424 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
GABARAPL1-208ENST00000540424 PTPRGP23470 1445 aa20.89■□□□□ 0.94
GABARAPL1-208ENST00000540424 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
GABARAPL1-208ENST00000540424 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
GABARAPL1-208ENST00000540424 FOXD1Q16676 465 aa20.87■□□□□ 0.93
GABARAPL1-208ENST00000540424 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
GABARAPL1-208ENST00000540424 PZPP20742 1482 aa20.86■□□□□ 0.93
GABARAPL1-208ENST00000540424 UBE2Q2Q8WVN8 375 aa20.86■□□□□ 0.93
GABARAPL1-208ENST00000540424 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
GABARAPL1-208ENST00000540424 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
GABARAPL1-208ENST00000540424 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.93
GABARAPL1-208ENST00000540424 KIAA1107Q9UPP5 1409 aa20.83■□□□□ 0.92
GABARAPL1-208ENST00000540424 TSPY4P0CV99 314 aa20.82■□□□□ 0.92
GABARAPL1-208ENST00000540424 TSPY10P0CW01 314 aa20.82■□□□□ 0.92
GABARAPL1-208ENST00000540424 C9orf84Q5VXU9 1444 aa20.81■□□□□ 0.92
GABARAPL1-208ENST00000540424 ARHGEF5Q12774 1597 aa20.8■□□□□ 0.92
GABARAPL1-208ENST00000540424 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
GABARAPL1-208ENST00000540424 NOP58Q9Y2X3 529 aaKnown RBP20.79■□□□□ 0.92
GABARAPL1-208ENST00000540424 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
GABARAPL1-208ENST00000540424 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
GABARAPL1-208ENST00000540424 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
GABARAPL1-208ENST00000540424 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
GABARAPL1-208ENST00000540424 PKD2Q13563 968 aa20.74■□□□□ 0.91
GABARAPL1-208ENST00000540424 KDM5DQ9BY66 1539 aa20.74■□□□□ 0.91
GABARAPL1-208ENST00000540424 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
GABARAPL1-208ENST00000540424 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
GABARAPL1-208ENST00000540424 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
GABARAPL1-208ENST00000540424 CCDC141Q6ZP82 1450 aa20.72■□□□□ 0.91
GABARAPL1-208ENST00000540424 CCDC7Q96M83 1385 aa20.72■□□□□ 0.91
GABARAPL1-208ENST00000540424 NUP155O75694 1391 aa20.71■□□□□ 0.91
GABARAPL1-208ENST00000540424 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
GABARAPL1-208ENST00000540424 KIF15Q9NS87 1388 aa20.7■□□□□ 0.9
GABARAPL1-208ENST00000540424 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
GABARAPL1-208ENST00000540424 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
GABARAPL1-208ENST00000540424 NBR1Q14596 966 aa20.69■□□□□ 0.9
GABARAPL1-208ENST00000540424 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.9
GABARAPL1-208ENST00000540424 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
GABARAPL1-208ENST00000540424 SAMD9LQ8IVG5 1584 aa20.67■□□□□ 0.9
GABARAPL1-208ENST00000540424 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
GABARAPL1-208ENST00000540424 CDC42BPBQ9Y5S2 1711 aa20.66■□□□□ 0.9
GABARAPL1-208ENST00000540424 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
GABARAPL1-208ENST00000540424 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
GABARAPL1-208ENST00000540424 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
GABARAPL1-208ENST00000540424 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.89
GABARAPL1-208ENST00000540424 RTL5Q5HYW3 569 aaPredicted RBP20.63■□□□□ 0.89
GABARAPL1-208ENST00000540424 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
GABARAPL1-208ENST00000540424 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
GABARAPL1-208ENST00000540424 UHRF1BP1Q6BDS2 1440 aa20.62■□□□□ 0.89
GABARAPL1-208ENST00000540424 PAK3O75914 559 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms