RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RIMS1Q86UR5 1692 aaKnown RBP20.61■□□□□ 0.89
COPS7A-211ENST00000540408 MLECQ14165 292 aa20.6■□□□□ 0.89
COPS7A-211ENST00000540408 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
COPS7A-211ENST00000540408 LMTK3Q96Q04 1460 aa20.59■□□□□ 0.89
COPS7A-211ENST00000540408 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
COPS7A-211ENST00000540408 HSPA2P54652 639 aa20.54■□□□□ 0.88
COPS7A-211ENST00000540408 MYT1LQ9UL68 1186 aa20.53■□□□□ 0.88
COPS7A-211ENST00000540408 ATP10AO60312 1499 aa20.53■□□□□ 0.88
COPS7A-211ENST00000540408 ARHGAP35Q9NRY4 1499 aa20.53■□□□□ 0.88
COPS7A-211ENST00000540408 CLIP1P30622 1438 aa20.52■□□□□ 0.87
COPS7A-211ENST00000540408 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
COPS7A-211ENST00000540408 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
COPS7A-211ENST00000540408 TROQ12816 1431 aaPredicted RBP20.49■□□□□ 0.87
COPS7A-211ENST00000540408 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
COPS7A-211ENST00000540408 KIF14Q15058 1648 aa20.48■□□□□ 0.87
COPS7A-211ENST00000540408 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
COPS7A-211ENST00000540408 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
COPS7A-211ENST00000540408 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
COPS7A-211ENST00000540408 FER1L4A9Z1Z3 1794 aa20.46■□□□□ 0.87
COPS7A-211ENST00000540408 SIGLEC1Q9BZZ2 1709 aa20.45■□□□□ 0.86
COPS7A-211ENST00000540408 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
COPS7A-211ENST00000540408 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-211ENST00000540408 ESF1Q9H501 851 aaKnown RBP20.4■□□□□ 0.86
COPS7A-211ENST00000540408 CERKQ8TCT0 537 aa20.39■□□□□ 0.85
COPS7A-211ENST00000540408 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
COPS7A-211ENST00000540408 KDM5CP41229 1560 aa20.37■□□□□ 0.85
COPS7A-211ENST00000540408 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
COPS7A-211ENST00000540408 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
COPS7A-211ENST00000540408 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
COPS7A-211ENST00000540408 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
COPS7A-211ENST00000540408 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.84
COPS7A-211ENST00000540408 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
COPS7A-211ENST00000540408 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
COPS7A-211ENST00000540408 REREQ9P2R6 1566 aa20.3■□□□□ 0.84
COPS7A-211ENST00000540408 DIP2CQ9Y2E4 1556 aa20.3■□□□□ 0.84
COPS7A-211ENST00000540408 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
COPS7A-211ENST00000540408 SETD1BQ9UPS6 1966 aaKnown RBP20.29■□□□□ 0.84
COPS7A-211ENST00000540408 PREX2Q70Z35 1606 aa20.29■□□□□ 0.84
COPS7A-211ENST00000540408 ZNF777Q9ULD5 760 aaPredicted RBP20.29■□□□□ 0.84
COPS7A-211ENST00000540408 ABCC1P33527 1531 aa20.27■□□□□ 0.83
COPS7A-211ENST00000540408 AGLP35573 1532 aa20.27■□□□□ 0.83
COPS7A-211ENST00000540408 ABCA6Q8N139 1617 aa20.26■□□□□ 0.83
COPS7A-211ENST00000540408 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
COPS7A-211ENST00000540408 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
COPS7A-211ENST00000540408 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
COPS7A-211ENST00000540408 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
COPS7A-211ENST00000540408 CDC42BPAQ5VT25 1732 aa20.2■□□□□ 0.82
COPS7A-211ENST00000540408 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
COPS7A-211ENST00000540408 C3P01024 1663 aa20.19■□□□□ 0.82
COPS7A-211ENST00000540408 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-211ENST00000540408 STRCQ7RTU9 1775 aa20.18■□□□□ 0.82
COPS7A-211ENST00000540408 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
COPS7A-211ENST00000540408 PTPRTO14522 1441 aa20.18■□□□□ 0.82
COPS7A-211ENST00000540408 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
COPS7A-211ENST00000540408 SAMD9LQ8IVG5 1584 aa20.17■□□□□ 0.82
COPS7A-211ENST00000540408 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
COPS7A-211ENST00000540408 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
COPS7A-211ENST00000540408 KIAA1107Q9UPP5 1409 aa20.14■□□□□ 0.81
COPS7A-211ENST00000540408 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
COPS7A-211ENST00000540408 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
COPS7A-211ENST00000540408 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
COPS7A-211ENST00000540408 NPATQ14207 1427 aa20.12■□□□□ 0.81
COPS7A-211ENST00000540408 GGT6Q6P531 493 aa20.1■□□□□ 0.81
COPS7A-211ENST00000540408 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
COPS7A-211ENST00000540408 MROH2AA6NES4 1674 aa20.08■□□□□ 0.81
COPS7A-211ENST00000540408 A2MP01023 1474 aa20.08■□□□□ 0.81
COPS7A-211ENST00000540408 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
COPS7A-211ENST00000540408 NCOA1Q15788 1441 aa20.08■□□□□ 0.8
COPS7A-211ENST00000540408 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
COPS7A-211ENST00000540408 DISP3Q9P2K9 1392 aa20.05■□□□□ 0.8
COPS7A-211ENST00000540408 CAMSAP1Q5T5Y3 1602 aa20.04■□□□□ 0.8
COPS7A-211ENST00000540408 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.8
COPS7A-211ENST00000540408 PKD2Q13563 968 aa20.02■□□□□ 0.8
COPS7A-211ENST00000540408 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
COPS7A-211ENST00000540408 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
COPS7A-211ENST00000540408 LTBP4Q8N2S1 1624 aa20.01■□□□□ 0.79
COPS7A-211ENST00000540408 ZNF644Q9H582 1327 aaPredicted RBP20.01■□□□□ 0.79
COPS7A-211ENST00000540408 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
COPS7A-211ENST00000540408 PLXNC1O60486 1568 aa20■□□□□ 0.79
COPS7A-211ENST00000540408 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
COPS7A-211ENST00000540408 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
COPS7A-211ENST00000540408 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
COPS7A-211ENST00000540408 RSPH4AQ5TD94 716 aa19.97■□□□□ 0.79
COPS7A-211ENST00000540408 ADGBQ8N7X0 1667 aa19.97■□□□□ 0.79
COPS7A-211ENST00000540408 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
COPS7A-211ENST00000540408 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
COPS7A-211ENST00000540408 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.79
COPS7A-211ENST00000540408 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
COPS7A-211ENST00000540408 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
COPS7A-211ENST00000540408 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
COPS7A-211ENST00000540408 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
COPS7A-211ENST00000540408 KIF3BO15066 747 aa19.93■□□□□ 0.78
COPS7A-211ENST00000540408 MYO3AQ8NEV4 1616 aa19.93■□□□□ 0.78
COPS7A-211ENST00000540408 ZNF142P52746 1687 aaPredicted RBP19.92■□□□□ 0.78
COPS7A-211ENST00000540408 UBAP1LF5GYI3 381 aa19.92■□□□□ 0.78
COPS7A-211ENST00000540408 TSPY4P0CV99 314 aa19.9■□□□□ 0.78
COPS7A-211ENST00000540408 TSPY10P0CW01 314 aa19.9■□□□□ 0.78
COPS7A-211ENST00000540408 ILDR2Q71H61 639 aa19.9■□□□□ 0.78
COPS7A-211ENST00000540408 WASHC2CQ9Y4E1 1318 aa19.9■□□□□ 0.78
COPS7A-211ENST00000540408 TCOF1Q13428 1488 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms