RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
NEK6-213ENST00000540326 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
NEK6-213ENST00000540326 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
NEK6-213ENST00000540326 ANKRD30BQ9BXX2 1392 aa17.26■□□□□ 0.35
NEK6-213ENST00000540326 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
NEK6-213ENST00000540326 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
NEK6-213ENST00000540326 KIAA0586Q9BVV6 1533 aa17.25■□□□□ 0.35
NEK6-213ENST00000540326 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
NEK6-213ENST00000540326 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
NEK6-213ENST00000540326 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
NEK6-213ENST00000540326 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
NEK6-213ENST00000540326 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
NEK6-213ENST00000540326 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
NEK6-213ENST00000540326 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
NEK6-213ENST00000540326 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
NEK6-213ENST00000540326 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
NEK6-213ENST00000540326 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
NEK6-213ENST00000540326 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
NEK6-213ENST00000540326 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
NEK6-213ENST00000540326 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
NEK6-213ENST00000540326 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
NEK6-213ENST00000540326 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
NEK6-213ENST00000540326 FAM9BQ8IZU0 186 aa17.19■□□□□ 0.34
NEK6-213ENST00000540326 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
NEK6-213ENST00000540326 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
NEK6-213ENST00000540326 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
NEK6-213ENST00000540326 KIF7Q2M1P5 1343 aa17.16■□□□□ 0.34
NEK6-213ENST00000540326 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
NEK6-213ENST00000540326 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
NEK6-213ENST00000540326 FBLN2P98095 1184 aa17.15■□□□□ 0.34
NEK6-213ENST00000540326 PLB1Q6P1J6 1458 aa17.15■□□□□ 0.34
NEK6-213ENST00000540326 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
NEK6-213ENST00000540326 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
NEK6-213ENST00000540326 SPATA31E1Q6ZUB1 1445 aa17.14■□□□□ 0.33
NEK6-213ENST00000540326 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
NEK6-213ENST00000540326 PZPP20742 1482 aa17.13■□□□□ 0.33
NEK6-213ENST00000540326 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
NEK6-213ENST00000540326 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
NEK6-213ENST00000540326 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
NEK6-213ENST00000540326 KIF14Q15058 1648 aa17.1■□□□□ 0.33
NEK6-213ENST00000540326 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
NEK6-213ENST00000540326 PKD2Q13563 968 aa17.08■□□□□ 0.33
NEK6-213ENST00000540326 CEP170Q5SW79 1584 aa17.08■□□□□ 0.32
NEK6-213ENST00000540326 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
NEK6-213ENST00000540326 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
NEK6-213ENST00000540326 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
NEK6-213ENST00000540326 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
NEK6-213ENST00000540326 ZBED9Q6R2W3 1325 aa17.05■□□□□ 0.32
NEK6-213ENST00000540326 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
NEK6-213ENST00000540326 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
NEK6-213ENST00000540326 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
NEK6-213ENST00000540326 ANKRD30AQ9BXX3 1397 aa17.04■□□□□ 0.32
NEK6-213ENST00000540326 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
NEK6-213ENST00000540326 USP47Q96K76 1375 aa17.03■□□□□ 0.32
NEK6-213ENST00000540326 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
NEK6-213ENST00000540326 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
NEK6-213ENST00000540326 MBD5Q9P267 1494 aa17.02■□□□□ 0.32
NEK6-213ENST00000540326 ANKRD50Q9ULJ7 1429 aa17.02■□□□□ 0.32
NEK6-213ENST00000540326 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.31
NEK6-213ENST00000540326 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
NEK6-213ENST00000540326 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
NEK6-213ENST00000540326 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
NEK6-213ENST00000540326 BCORL1Q5H9F3 1711 aa17■□□□□ 0.31
NEK6-213ENST00000540326 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
NEK6-213ENST00000540326 NUP155O75694 1391 aa16.99■□□□□ 0.31
NEK6-213ENST00000540326 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
NEK6-213ENST00000540326 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
NEK6-213ENST00000540326 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
NEK6-213ENST00000540326 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
NEK6-213ENST00000540326 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.3
NEK6-213ENST00000540326 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
NEK6-213ENST00000540326 MSH5O43196 834 aa16.95■□□□□ 0.3
NEK6-213ENST00000540326 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
NEK6-213ENST00000540326 NUP160Q12769 1436 aa16.95■□□□□ 0.3
NEK6-213ENST00000540326 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
NEK6-213ENST00000540326 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
NEK6-213ENST00000540326 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
NEK6-213ENST00000540326 KDM5CP41229 1560 aa16.94■□□□□ 0.3
NEK6-213ENST00000540326 ATP10BO94823 1461 aa16.94■□□□□ 0.3
NEK6-213ENST00000540326 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.34e-7■■■■□ 19.9
NEK6-213ENST00000540326 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
NEK6-213ENST00000540326 ABCA8O94911 1581 aa16.91■□□□□ 0.3
NEK6-213ENST00000540326 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
NEK6-213ENST00000540326 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.3
NEK6-213ENST00000540326 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
NEK6-213ENST00000540326 KIF15Q9NS87 1388 aa16.89■□□□□ 0.29
NEK6-213ENST00000540326 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
NEK6-213ENST00000540326 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
NEK6-213ENST00000540326 RALGAPBQ86X10 1494 aa16.89■□□□□ 0.29
NEK6-213ENST00000540326 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
NEK6-213ENST00000540326 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
NEK6-213ENST00000540326 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
NEK6-213ENST00000540326 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
NEK6-213ENST00000540326 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
NEK6-213ENST00000540326 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
NEK6-213ENST00000540326 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
NEK6-213ENST00000540326 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
NEK6-213ENST00000540326 KDM5DQ9BY66 1539 aa16.83■□□□□ 0.28
NEK6-213ENST00000540326 PTPRGP23470 1445 aa16.81■□□□□ 0.28
NEK6-213ENST00000540326 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms