RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
GNE-205ENST00000539815 MEX3CQ5U5Q3 659 aaKnown RBP11.76□□□□□ -0.53
GNE-205ENST00000539815 PPP1R15AO75807 674 aaPredicted RBP11.76□□□□□ -0.53
GNE-205ENST00000539815 EID1Q9Y6B2 187 aa11.76□□□□□ -0.53
GNE-205ENST00000539815 YEATS2Q9ULM3 1422 aa11.76□□□□□ -0.53
GNE-205ENST00000539815 MTUS2Q5JR59 1369 aa11.76□□□□□ -0.53
GNE-205ENST00000539815 FOXD1Q16676 465 aa11.76□□□□□ -0.53
GNE-205ENST00000539815 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
GNE-205ENST00000539815 UGGT2Q9NYU1 1516 aa11.75□□□□□ -0.53
GNE-205ENST00000539815 WASHC2CQ9Y4E1 1318 aa11.75□□□□□ -0.53
GNE-205ENST00000539815 EEA1Q15075 1411 aa11.75□□□□□ -0.53
GNE-205ENST00000539815 DISP1Q96F81 1524 aa11.74□□□□□ -0.53
GNE-205ENST00000539815 ATP10BO94823 1461 aa11.74□□□□□ -0.53
GNE-205ENST00000539815 KIF3BO15066 747 aa11.74□□□□□ -0.53
GNE-205ENST00000539815 PKD2Q13563 968 aa11.74□□□□□ -0.53
GNE-205ENST00000539815 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
GNE-205ENST00000539815 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
GNE-205ENST00000539815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■□□□□ 8.5
GNE-205ENST00000539815 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
GNE-205ENST00000539815 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
GNE-205ENST00000539815 KIAA0556O60303 1618 aa11.71□□□□□ -0.54
GNE-205ENST00000539815 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
GNE-205ENST00000539815 ZCCHC11Q5TAX3 1644 aaKnown RBP11.69□□□□□ -0.54
GNE-205ENST00000539815 ARHGAP5Q13017 1502 aa11.68□□□□□ -0.54
GNE-205ENST00000539815 ARAP3Q8WWN8 1544 aa11.67□□□□□ -0.54
GNE-205ENST00000539815 ATP10AO60312 1499 aa11.67□□□□□ -0.54
GNE-205ENST00000539815 HDGFP51858 240 aaKnown RBP11.67□□□□□ -0.54
GNE-205ENST00000539815 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
GNE-205ENST00000539815 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
GNE-205ENST00000539815 C9orf84Q5VXU9 1444 aa11.66□□□□□ -0.54
GNE-205ENST00000539815 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.54
GNE-205ENST00000539815 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.54
GNE-205ENST00000539815 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
GNE-205ENST00000539815 CNTLNQ9NXG0 1405 aa11.63□□□□□ -0.55
GNE-205ENST00000539815 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
GNE-205ENST00000539815 KIF21BO75037 1637 aa11.63□□□□□ -0.55
GNE-205ENST00000539815 CFAP43Q8NDM7 1665 aa11.63□□□□□ -0.55
GNE-205ENST00000539815 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
GNE-205ENST00000539815 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
GNE-205ENST00000539815 HSPA1LP34931 641 aa11.61□□□□□ -0.55
GNE-205ENST00000539815 PLCH2O75038 1416 aa11.6□□□□□ -0.55
GNE-205ENST00000539815 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
GNE-205ENST00000539815 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
GNE-205ENST00000539815 ZNF518AQ6AHZ1 1483 aa11.59□□□□□ -0.55
GNE-205ENST00000539815 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
GNE-205ENST00000539815 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
GNE-205ENST00000539815 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
GNE-205ENST00000539815 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
GNE-205ENST00000539815 TROQ12816 1431 aaPredicted RBP11.56□□□□□ -0.56
GNE-205ENST00000539815 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
GNE-205ENST00000539815 ABCA8O94911 1581 aa11.55□□□□□ -0.56
GNE-205ENST00000539815 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
GNE-205ENST00000539815 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
GNE-205ENST00000539815 KANK1Q14678 1352 aa11.55□□□□□ -0.56
GNE-205ENST00000539815 A0A0G2JS52 829 aa11.54□□□□□ -0.56
GNE-205ENST00000539815 MADDQ8WXG6 1647 aa11.54□□□□□ -0.56
GNE-205ENST00000539815 ATF3P18847 181 aa11.54□□□□□ -0.56
GNE-205ENST00000539815 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
GNE-205ENST00000539815 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
GNE-205ENST00000539815 NUTM2BA6NNL0 878 aaPredicted RBP11.53□□□□□ -0.56
GNE-205ENST00000539815 NUTM2EB1AL46 878 aaPredicted RBP11.53□□□□□ -0.56
GNE-205ENST00000539815 FAM50AQ14320 339 aaKnown RBP11.53□□□□□ -0.56
GNE-205ENST00000539815 NUTM2AQ8IVF1 878 aaPredicted RBP11.53□□□□□ -0.56
GNE-205ENST00000539815 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.56
GNE-205ENST00000539815 TNRQ92752 1358 aa11.52□□□□□ -0.57
GNE-205ENST00000539815 PTPRTO14522 1441 aa11.52□□□□□ -0.57
GNE-205ENST00000539815 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
GNE-205ENST00000539815 TRIM52Q96A61 297 aa11.51□□□□□ -0.57
GNE-205ENST00000539815 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
GNE-205ENST00000539815 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
GNE-205ENST00000539815 FBXO31Q5XUX0 539 aaPredicted RBP11.49□□□□□ -0.57
GNE-205ENST00000539815 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
GNE-205ENST00000539815 ITGAEP38570 1179 aa11.49□□□□□ -0.57
GNE-205ENST00000539815 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
GNE-205ENST00000539815 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
GNE-205ENST00000539815 ZNF326Q5BKZ1 582 aaKnown RBP11.48□□□□□ -0.57
GNE-205ENST00000539815 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
GNE-205ENST00000539815 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
GNE-205ENST00000539815 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
GNE-205ENST00000539815 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
GNE-205ENST00000539815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
GNE-205ENST00000539815 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.58
GNE-205ENST00000539815 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
GNE-205ENST00000539815 SLC26A8Q96RN1 970 aa11.45□□□□□ -0.58
GNE-205ENST00000539815 CTTNBP2Q8WZ74 1663 aa11.44□□□□□ -0.58
GNE-205ENST00000539815 KIF14Q15058 1648 aa11.44□□□□□ -0.58
GNE-205ENST00000539815 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
GNE-205ENST00000539815 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
GNE-205ENST00000539815 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
GNE-205ENST00000539815 SPATA31D1Q6ZQQ2 1576 aa11.43□□□□□ -0.58
GNE-205ENST00000539815 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
GNE-205ENST00000539815 ZNF772Q68DY9 489 aaPredicted RBP11.42□□□□□ -0.58
GNE-205ENST00000539815 MSH6P52701 1360 aa11.42□□□□□ -0.58
GNE-205ENST00000539815 BCORL1Q5H9F3 1711 aa11.41□□□□□ -0.58
GNE-205ENST00000539815 A2MP01023 1474 aa11.41□□□□□ -0.58
GNE-205ENST00000539815 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
GNE-205ENST00000539815 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
GNE-205ENST00000539815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.39□□□□□ -0.59
GNE-205ENST00000539815 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
GNE-205ENST00000539815 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms