RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 CUX1P39880 1505 aa16.17■□□□□ 0.18
PRKCQ-203ENST00000539722 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
PRKCQ-203ENST00000539722 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
PRKCQ-203ENST00000539722 NAIPQ13075 1403 aa16.17■□□□□ 0.18
PRKCQ-203ENST00000539722 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
PRKCQ-203ENST00000539722 HFM1A2PYH4 1435 aa16.16■□□□□ 0.18
PRKCQ-203ENST00000539722 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
PRKCQ-203ENST00000539722 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
PRKCQ-203ENST00000539722 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
PRKCQ-203ENST00000539722 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
PRKCQ-203ENST00000539722 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
PRKCQ-203ENST00000539722 IGF1RP08069 1367 aa16.13■□□□□ 0.17
PRKCQ-203ENST00000539722 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
PRKCQ-203ENST00000539722 MS4A1P11836 297 aa16.12■□□□□ 0.17
PRKCQ-203ENST00000539722 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
PRKCQ-203ENST00000539722 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
PRKCQ-203ENST00000539722 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
PRKCQ-203ENST00000539722 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
PRKCQ-203ENST00000539722 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
PRKCQ-203ENST00000539722 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
PRKCQ-203ENST00000539722 CRBNQ96SW2 442 aa16.08■□□□□ 0.17
PRKCQ-203ENST00000539722 POGKQ9P215 609 aa16.08■□□□□ 0.17
PRKCQ-203ENST00000539722 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
PRKCQ-203ENST00000539722 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.16
PRKCQ-203ENST00000539722 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
PRKCQ-203ENST00000539722 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
PRKCQ-203ENST00000539722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRKCQ-203ENST00000539722 GLIPR1L2Q4G1C9 344 aa16.05■□□□□ 0.16
PRKCQ-203ENST00000539722 RGS3P49796 1198 aa16.04■□□□□ 0.16
PRKCQ-203ENST00000539722 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
PRKCQ-203ENST00000539722 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
PRKCQ-203ENST00000539722 ARID3CA6NKF2 412 aa16■□□□□ 0.15
PRKCQ-203ENST00000539722 SLKQ9H2G2 1235 aaPredicted RBP16■□□□□ 0.15
PRKCQ-203ENST00000539722 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
PRKCQ-203ENST00000539722 KDM6BO15054 1643 aa15.98■□□□□ 0.15
PRKCQ-203ENST00000539722 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
PRKCQ-203ENST00000539722 C8orf34Q49A92 452 aa15.96■□□□□ 0.15
PRKCQ-203ENST00000539722 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
PRKCQ-203ENST00000539722 CASKIN1Q8WXD9 1431 aa15.95■□□□□ 0.14
PRKCQ-203ENST00000539722 FYCO1Q9BQS8 1478 aa15.95■□□□□ 0.14
PRKCQ-203ENST00000539722 CFTRP13569 1480 aa15.95■□□□□ 0.14
PRKCQ-203ENST00000539722 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
PRKCQ-203ENST00000539722 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
PRKCQ-203ENST00000539722 USP47Q96K76 1375 aa15.94■□□□□ 0.14
PRKCQ-203ENST00000539722 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
PRKCQ-203ENST00000539722 GZF1Q9H116 711 aaPredicted RBP15.94■□□□□ 0.14
PRKCQ-203ENST00000539722 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
PRKCQ-203ENST00000539722 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
PRKCQ-203ENST00000539722 PANK2Q9BZ23 570 aa15.92■□□□□ 0.14
PRKCQ-203ENST00000539722 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
PRKCQ-203ENST00000539722 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
PRKCQ-203ENST00000539722 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
PRKCQ-203ENST00000539722 BCORL1Q5H9F3 1711 aa15.89■□□□□ 0.13
PRKCQ-203ENST00000539722 SPRYD3Q8NCJ5 442 aa15.89■□□□□ 0.13
PRKCQ-203ENST00000539722 MYBBP1AQ9BQG0 1328 aaKnown RBP15.88■□□□□ 0.13
PRKCQ-203ENST00000539722 ANKRD30BQ9BXX2 1392 aa15.88■□□□□ 0.13
PRKCQ-203ENST00000539722 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
PRKCQ-203ENST00000539722 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
PRKCQ-203ENST00000539722 KTN1Q86UP2 1357 aaKnown RBP15.87■□□□□ 0.13
PRKCQ-203ENST00000539722 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
PRKCQ-203ENST00000539722 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
PRKCQ-203ENST00000539722 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRKCQ-203ENST00000539722 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
PRKCQ-203ENST00000539722 HECW1Q76N89 1606 aa15.85■□□□□ 0.13
PRKCQ-203ENST00000539722 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 SEC24BO95487 1268 aa15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 CARD11Q9BXL7 1154 aa15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
PRKCQ-203ENST00000539722 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.13
PRKCQ-203ENST00000539722 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.13
PRKCQ-203ENST00000539722 PDE3BQ13370 1112 aa15.83■□□□□ 0.12
PRKCQ-203ENST00000539722 RRP9O43818 475 aaKnown RBP15.81■□□□□ 0.12
PRKCQ-203ENST00000539722 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
PRKCQ-203ENST00000539722 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
PRKCQ-203ENST00000539722 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
PRKCQ-203ENST00000539722 GOLGA6L3A6NEY3 463 aa15.79■□□□□ 0.12
PRKCQ-203ENST00000539722 RALBP1Q15311 655 aa15.79■□□□□ 0.12
PRKCQ-203ENST00000539722 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
PRKCQ-203ENST00000539722 CLCN1P35523 988 aa15.77■□□□□ 0.12
PRKCQ-203ENST00000539722 USP19O94966 1318 aa15.77■□□□□ 0.11
PRKCQ-203ENST00000539722 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
PRKCQ-203ENST00000539722 LRRIQ1Q96JM4 1722 aa15.75■□□□□ 0.11
PRKCQ-203ENST00000539722 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
PRKCQ-203ENST00000539722 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
PRKCQ-203ENST00000539722 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
PRKCQ-203ENST00000539722 BECN1Q14457 450 aa15.73■□□□□ 0.11
PRKCQ-203ENST00000539722 ERBB4Q15303 1308 aa15.73■□□□□ 0.11
PRKCQ-203ENST00000539722 MAGI3Q5TCQ9 1506 aa15.73■□□□□ 0.11
PRKCQ-203ENST00000539722 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
PRKCQ-203ENST00000539722 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
PRKCQ-203ENST00000539722 IGHDP01880 384 aa15.71■□□□□ 0.11
PRKCQ-203ENST00000539722 PKD2Q13563 968 aa15.71■□□□□ 0.11
PRKCQ-203ENST00000539722 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
PRKCQ-203ENST00000539722 UGGT2Q9NYU1 1516 aa15.7■□□□□ 0.1
PRKCQ-203ENST00000539722 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
PRKCQ-203ENST00000539722 ARID3AQ99856 593 aa15.7■□□□□ 0.1
PRKCQ-203ENST00000539722 ANTXR1Q9H6X2 564 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms