RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ABCC5O15440 1437 aa19.71■□□□□ 0.75
UBE3B-210ENST00000539599 DAPK1P53355 1430 aa19.71■□□□□ 0.75
UBE3B-210ENST00000539599 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
UBE3B-210ENST00000539599 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
UBE3B-210ENST00000539599 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
UBE3B-210ENST00000539599 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
UBE3B-210ENST00000539599 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
UBE3B-210ENST00000539599 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
UBE3B-210ENST00000539599 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
UBE3B-210ENST00000539599 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
UBE3B-210ENST00000539599 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
UBE3B-210ENST00000539599 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
UBE3B-210ENST00000539599 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
UBE3B-210ENST00000539599 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
UBE3B-210ENST00000539599 CFDP1Q9UEE9 299 aaPredicted RBP19.64■□□□□ 0.73
UBE3B-210ENST00000539599 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
UBE3B-210ENST00000539599 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
UBE3B-210ENST00000539599 ANKRD30BQ9BXX2 1392 aa19.63■□□□□ 0.73
UBE3B-210ENST00000539599 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
UBE3B-210ENST00000539599 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
UBE3B-210ENST00000539599 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
UBE3B-210ENST00000539599 NEFLP07196 543 aa19.61■□□□□ 0.73
UBE3B-210ENST00000539599 KIF14Q15058 1648 aa19.6■□□□□ 0.73
UBE3B-210ENST00000539599 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
UBE3B-210ENST00000539599 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
UBE3B-210ENST00000539599 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.73
UBE3B-210ENST00000539599 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.72
UBE3B-210ENST00000539599 CAMSAP2Q08AD1 1489 aa19.57■□□□□ 0.72
UBE3B-210ENST00000539599 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
UBE3B-210ENST00000539599 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
UBE3B-210ENST00000539599 TEX14Q8IWB6 1497 aa19.55■□□□□ 0.72
UBE3B-210ENST00000539599 CCDC7Q96M83 1385 aa19.55■□□□□ 0.72
UBE3B-210ENST00000539599 TROQ12816 1431 aaPredicted RBP19.54■□□□□ 0.72
UBE3B-210ENST00000539599 ROCK1Q13464 1354 aa19.54■□□□□ 0.72
UBE3B-210ENST00000539599 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
UBE3B-210ENST00000539599 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
UBE3B-210ENST00000539599 PZPP20742 1482 aa19.53■□□□□ 0.72
UBE3B-210ENST00000539599 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
UBE3B-210ENST00000539599 PKD2Q13563 968 aa19.52■□□□□ 0.72
UBE3B-210ENST00000539599 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
UBE3B-210ENST00000539599 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
UBE3B-210ENST00000539599 MRS2Q9HD23 443 aa19.49■□□□□ 0.71
UBE3B-210ENST00000539599 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
UBE3B-210ENST00000539599 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.71
UBE3B-210ENST00000539599 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
UBE3B-210ENST00000539599 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
UBE3B-210ENST00000539599 SPATA31E1Q6ZUB1 1445 aa19.43■□□□□ 0.7
UBE3B-210ENST00000539599 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
UBE3B-210ENST00000539599 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
UBE3B-210ENST00000539599 NUP155O75694 1391 aa19.4■□□□□ 0.7
UBE3B-210ENST00000539599 ANKRD50Q9ULJ7 1429 aa19.4■□□□□ 0.7
UBE3B-210ENST00000539599 RBM19Q9Y4C8 960 aaKnown RBP19.39■□□□□ 0.7
UBE3B-210ENST00000539599 ATP10BO94823 1461 aa19.39■□□□□ 0.7
UBE3B-210ENST00000539599 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
UBE3B-210ENST00000539599 ANKRD30AQ9BXX3 1397 aa19.38■□□□□ 0.69
UBE3B-210ENST00000539599 NUP160Q12769 1436 aa19.38■□□□□ 0.69
UBE3B-210ENST00000539599 USP47Q96K76 1375 aa19.38■□□□□ 0.69
UBE3B-210ENST00000539599 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
UBE3B-210ENST00000539599 BCORL1Q5H9F3 1711 aa19.36■□□□□ 0.69
UBE3B-210ENST00000539599 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
UBE3B-210ENST00000539599 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
UBE3B-210ENST00000539599 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
UBE3B-210ENST00000539599 CROCC2H7BZ55 1655 aa19.34■□□□□ 0.69
UBE3B-210ENST00000539599 MBD5Q9P267 1494 aa19.33■□□□□ 0.68
UBE3B-210ENST00000539599 ABCC10Q5T3U5 1492 aa19.32■□□□□ 0.68
UBE3B-210ENST00000539599 ADCY10Q96PN6 1610 aa19.32■□□□□ 0.68
UBE3B-210ENST00000539599 ADGRL2O95490 1459 aa19.32■□□□□ 0.68
UBE3B-210ENST00000539599 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
UBE3B-210ENST00000539599 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
UBE3B-210ENST00000539599 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
UBE3B-210ENST00000539599 ABCA8O94911 1581 aa19.31■□□□□ 0.68
UBE3B-210ENST00000539599 CARD11Q9BXL7 1154 aa19.31■□□□□ 0.68
UBE3B-210ENST00000539599 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
UBE3B-210ENST00000539599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
UBE3B-210ENST00000539599 KIF15Q9NS87 1388 aa19.3■□□□□ 0.68
UBE3B-210ENST00000539599 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
UBE3B-210ENST00000539599 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
UBE3B-210ENST00000539599 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
UBE3B-210ENST00000539599 PTPRGP23470 1445 aa19.26■□□□□ 0.67
UBE3B-210ENST00000539599 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
UBE3B-210ENST00000539599 KDM5CP41229 1560 aa19.24■□□□□ 0.67
UBE3B-210ENST00000539599 ANP32EQ9BTT0 268 aa19.22■□□□□ 0.67
UBE3B-210ENST00000539599 POLR1AO95602 1720 aaPredicted RBP19.21■□□□□ 0.67
UBE3B-210ENST00000539599 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
UBE3B-210ENST00000539599 SALL2Q9Y467 1007 aaPredicted RBP19.2■□□□□ 0.66
UBE3B-210ENST00000539599 SAMD9LQ8IVG5 1584 aa19.19■□□□□ 0.66
UBE3B-210ENST00000539599 MSH5O43196 834 aa19.19■□□□□ 0.66
UBE3B-210ENST00000539599 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
UBE3B-210ENST00000539599 MYT1Q01538 1121 aa19.17■□□□□ 0.66
UBE3B-210ENST00000539599 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
UBE3B-210ENST00000539599 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
UBE3B-210ENST00000539599 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
UBE3B-210ENST00000539599 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
UBE3B-210ENST00000539599 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
UBE3B-210ENST00000539599 PPP4R2Q9NY27 417 aa19.15■□□□□ 0.66
UBE3B-210ENST00000539599 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
UBE3B-210ENST00000539599 TTC37Q6PGP7 1564 aa19.13■□□□□ 0.65
UBE3B-210ENST00000539599 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
UBE3B-210ENST00000539599 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
UBE3B-210ENST00000539599 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms