RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 ZNF777Q9ULD5 760 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-212ENST00000539382 ITSN2Q9NZM3 1697 aa16.51■□□□□ 0.23
CTCFL-212ENST00000539382 CAMSAP2Q08AD1 1489 aa16.5■□□□□ 0.23
CTCFL-212ENST00000539382 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
CTCFL-212ENST00000539382 HFM1A2PYH4 1435 aa16.5■□□□□ 0.23
CTCFL-212ENST00000539382 ABCC5O15440 1437 aa16.5■□□□□ 0.23
CTCFL-212ENST00000539382 NAIPQ13075 1403 aa16.5■□□□□ 0.23
CTCFL-212ENST00000539382 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
CTCFL-212ENST00000539382 DAPK1P53355 1430 aa16.49■□□□□ 0.23
CTCFL-212ENST00000539382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.48■□□□□ 0.233e-12■■■■■ 30.2
CTCFL-212ENST00000539382 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
CTCFL-212ENST00000539382 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
CTCFL-212ENST00000539382 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
CTCFL-212ENST00000539382 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
CTCFL-212ENST00000539382 PREX2Q70Z35 1606 aa16.42■□□□□ 0.22
CTCFL-212ENST00000539382 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
CTCFL-212ENST00000539382 KDM6BO15054 1643 aa16.42■□□□□ 0.22
CTCFL-212ENST00000539382 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
CTCFL-212ENST00000539382 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
CTCFL-212ENST00000539382 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTCFL-212ENST00000539382 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
CTCFL-212ENST00000539382 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
CTCFL-212ENST00000539382 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
CTCFL-212ENST00000539382 ROCK1Q13464 1354 aa16.39■□□□□ 0.21
CTCFL-212ENST00000539382 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
CTCFL-212ENST00000539382 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
CTCFL-212ENST00000539382 GCC2Q8IWJ2 1684 aa16.38■□□□□ 0.21
CTCFL-212ENST00000539382 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
CTCFL-212ENST00000539382 PLCH2O75038 1416 aa16.36■□□□□ 0.21
CTCFL-212ENST00000539382 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
CTCFL-212ENST00000539382 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
CTCFL-212ENST00000539382 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
CTCFL-212ENST00000539382 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
CTCFL-212ENST00000539382 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
CTCFL-212ENST00000539382 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
CTCFL-212ENST00000539382 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
CTCFL-212ENST00000539382 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
CTCFL-212ENST00000539382 SYCP2Q9BX26 1530 aa16.32■□□□□ 0.2
CTCFL-212ENST00000539382 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
CTCFL-212ENST00000539382 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTCFL-212ENST00000539382 ARHGEF5Q12774 1597 aa16.32■□□□□ 0.2
CTCFL-212ENST00000539382 C9orf84Q5VXU9 1444 aa16.32■□□□□ 0.2
CTCFL-212ENST00000539382 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
CTCFL-212ENST00000539382 DENND4BO75064 1496 aaPredicted RBP16.3■□□□□ 0.2
CTCFL-212ENST00000539382 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
CTCFL-212ENST00000539382 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
CTCFL-212ENST00000539382 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
CTCFL-212ENST00000539382 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
CTCFL-212ENST00000539382 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
CTCFL-212ENST00000539382 TSPY4P0CV99 314 aa16.29■□□□□ 0.2
CTCFL-212ENST00000539382 TSPY10P0CW01 314 aa16.29■□□□□ 0.2
CTCFL-212ENST00000539382 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
CTCFL-212ENST00000539382 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
CTCFL-212ENST00000539382 KIAA1107Q9UPP5 1409 aa16.28■□□□□ 0.2
CTCFL-212ENST00000539382 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
CTCFL-212ENST00000539382 ABCC1P33527 1531 aa16.25■□□□□ 0.19
CTCFL-212ENST00000539382 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
CTCFL-212ENST00000539382 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
CTCFL-212ENST00000539382 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
CTCFL-212ENST00000539382 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
CTCFL-212ENST00000539382 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
CTCFL-212ENST00000539382 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
CTCFL-212ENST00000539382 FANCAO15360 1455 aa16.23■□□□□ 0.19
CTCFL-212ENST00000539382 KIF15Q9NS87 1388 aa16.22■□□□□ 0.19
CTCFL-212ENST00000539382 FOXD1Q16676 465 aa16.21■□□□□ 0.19
CTCFL-212ENST00000539382 AFAP1Q8N556 730 aa16.21■□□□□ 0.19
CTCFL-212ENST00000539382 MAST1Q9Y2H9 1570 aa16.2■□□□□ 0.18
CTCFL-212ENST00000539382 PZPP20742 1482 aa16.19■□□□□ 0.18
CTCFL-212ENST00000539382 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
CTCFL-212ENST00000539382 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
CTCFL-212ENST00000539382 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
CTCFL-212ENST00000539382 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
CTCFL-212ENST00000539382 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
CTCFL-212ENST00000539382 NUP155O75694 1391 aa16.12■□□□□ 0.17
CTCFL-212ENST00000539382 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
CTCFL-212ENST00000539382 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
CTCFL-212ENST00000539382 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
CTCFL-212ENST00000539382 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
CTCFL-212ENST00000539382 PKD2Q13563 968 aa16.09■□□□□ 0.17
CTCFL-212ENST00000539382 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.17
CTCFL-212ENST00000539382 TIMELESSQ9UNS1 1208 aa16.08■□□□□ 0.17
CTCFL-212ENST00000539382 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.16
CTCFL-212ENST00000539382 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
CTCFL-212ENST00000539382 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-212ENST00000539382 MAP3K4Q9Y6R4 1608 aa16.07■□□□□ 0.16
CTCFL-212ENST00000539382 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-212ENST00000539382 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
CTCFL-212ENST00000539382 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
CTCFL-212ENST00000539382 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
CTCFL-212ENST00000539382 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
CTCFL-212ENST00000539382 GLI2P10070 1586 aa16.05■□□□□ 0.16
CTCFL-212ENST00000539382 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
CTCFL-212ENST00000539382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.161e-10■□□□□ 8.3
CTCFL-212ENST00000539382 ERBINQ96RT1 1412 aa16.05■□□□□ 0.16
CTCFL-212ENST00000539382 ZNF518AQ6AHZ1 1483 aa16.04■□□□□ 0.16
CTCFL-212ENST00000539382 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
CTCFL-212ENST00000539382 UNC13BO14795 1591 aa16.03■□□□□ 0.16
CTCFL-212ENST00000539382 POGZQ7Z3K3 1410 aa16.03■□□□□ 0.16
CTCFL-212ENST00000539382 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
CTCFL-212ENST00000539382 RAPGEF3O95398 923 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms