RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 SAMD1Q6SPF0 538 aaPredicted RBP6.04□□□□□ -1.44
PLS3-209ENST00000539310 LRRC9Q6ZRR7 1453 aa6.04□□□□□ -1.44
PLS3-209ENST00000539310 TMC1Q8TDI8 760 aa6.04□□□□□ -1.44
PLS3-209ENST00000539310 DDRGK1Q96HY6 314 aa6.04□□□□□ -1.44
PLS3-209ENST00000539310 CNTLNQ9NXG0 1405 aa6.04□□□□□ -1.44
PLS3-209ENST00000539310 SLC4A3P48751 1232 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 FRAT1Q92837 279 aaPredicted RBP6.03□□□□□ -1.44
PLS3-209ENST00000539310 RSPH6AQ9H0K4 717 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 ABCB7O75027 752 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 CAPN15O75808 1086 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 PDIA4P13667 645 aaKnown RBP6.03□□□□□ -1.44
PLS3-209ENST00000539310 NFKBIBQ15653 356 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 RRP7BPQ9NSQ0 103 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 CHIC2Q9UKJ5 165 aa6.03□□□□□ -1.44
PLS3-209ENST00000539310 SMG6Q86US8 1419 aaKnown RBP6.03□□□□□ -1.44
PLS3-209ENST00000539310 GLIPR1L2Q4G1C9 344 aa6.02□□□□□ -1.45
PLS3-209ENST00000539310 L3MBTL2Q969R5 705 aa6.02□□□□□ -1.45
PLS3-209ENST00000539310 CCDC7Q96M83 1385 aa6.02□□□□□ -1.45
PLS3-209ENST00000539310 ZNF219Q9P2Y4 722 aaPredicted RBP6.02□□□□□ -1.45
PLS3-209ENST00000539310 CCDC18Q5T9S5 1454 aa6.02□□□□□ -1.45
PLS3-209ENST00000539310 UACAQ9BZF9 1416 aa6.01□□□□□ -1.45
PLS3-209ENST00000539310 PKNOX2Q96KN3 472 aa6.01□□□□□ -1.45
PLS3-209ENST00000539310 MS4A1P11836 297 aa6.01□□□□□ -1.45
PLS3-209ENST00000539310 TIAM1Q13009 1591 aa6.01□□□□□ -1.45
PLS3-209ENST00000539310 ZNF326Q5BKZ1 582 aaKnown RBP6□□□□□ -1.45
PLS3-209ENST00000539310 KIF7Q2M1P5 1343 aa6□□□□□ -1.45
PLS3-209ENST00000539310 RNF123Q5XPI4 1314 aa6□□□□□ -1.45
PLS3-209ENST00000539310 RRP1P56182 461 aaKnown RBP6□□□□□ -1.45
PLS3-209ENST00000539310 RCAN3Q9UKA8 241 aa6□□□□□ -1.45
PLS3-209ENST00000539310 POLA2Q14181 598 aa5.99□□□□□ -1.45
PLS3-209ENST00000539310 MTUS2Q5JR59 1369 aa5.99□□□□□ -1.45
PLS3-209ENST00000539310 TOP2BQ02880 1626 aa5.99□□□□□ -1.45
PLS3-209ENST00000539310 SKAP1Q86WV1 359 aa5.98□□□□□ -1.45
PLS3-209ENST00000539310 FAM43AQ8N2R8 423 aa5.98□□□□□ -1.45
PLS3-209ENST00000539310 FMN1Q68DA7 1419 aa5.98□□□□□ -1.45
PLS3-209ENST00000539310 FRAT2O75474 233 aaPredicted RBP5.98□□□□□ -1.45
PLS3-209ENST00000539310 MKRN4PQ13434 485 aaPredicted RBP5.98□□□□□ -1.45
PLS3-209ENST00000539310 CARMIL1Q5VZK9 1371 aa5.98□□□□□ -1.45
PLS3-209ENST00000539310 MAP3K1Q13233 1512 aa5.97□□□□□ -1.45
PLS3-209ENST00000539310 VSIG10Q8N0Z9 540 aa5.97□□□□□ -1.45
PLS3-209ENST00000539310 MPHOSPH9Q99550 1183 aa5.97□□□□□ -1.45
PLS3-209ENST00000539310 HFM1A2PYH4 1435 aa5.97□□□□□ -1.45
PLS3-209ENST00000539310 NCOA1Q15788 1441 aa5.97□□□□□ -1.45
PLS3-209ENST00000539310 PNISRQ8TF01 805 aaKnown RBP5.97□□□□□ -1.45
PLS3-209ENST00000539310 NCOA2Q15596 1464 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 IGF1RP08069 1367 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.96□□□□□ -1.45
PLS3-209ENST00000539310 PLIN1O60240 522 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 NBPF8Q3BBV2 869 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 FGD6Q6ZV73 1430 aa5.96□□□□□ -1.45
PLS3-209ENST00000539310 ATAD2BQ9ULI0 1458 aa5.96□□□□□ -1.46
PLS3-209ENST00000539310 NAP1L5Q96NT1 182 aaPredicted RBP5.96□□□□□ -1.46
PLS3-209ENST00000539310 NAIPQ13075 1403 aa5.95□□□□□ -1.46
PLS3-209ENST00000539310 FHOD3Q2V2M9 1422 aa5.95□□□□□ -1.46
PLS3-209ENST00000539310 AQRO60306 1485 aaKnown RBP eCLIP5.95□□□□□ -1.46
PLS3-209ENST00000539310 DCAF11Q8TEB1 546 aa5.95□□□□□ -1.46
PLS3-209ENST00000539310 PTPRKQ15262 1439 aa5.95□□□□□ -1.46
PLS3-209ENST00000539310 NCAPD3P42695 1498 aa5.95□□□□□ -1.46
PLS3-209ENST00000539310 TAF7LQ5H9L4 462 aa5.94□□□□□ -1.46
PLS3-209ENST00000539310 PDE4CQ08493 712 aa5.94□□□□□ -1.46
PLS3-209ENST00000539310 RGS3P49796 1198 aa5.93□□□□□ -1.46
PLS3-209ENST00000539310 HSP90AA2PQ14568 343 aaPredicted RBP5.93□□□□□ -1.46
PLS3-209ENST00000539310 CRBNQ96SW2 442 aa5.93□□□□□ -1.46
PLS3-209ENST00000539310 ZMYND15Q9H091 742 aa5.93□□□□□ -1.46
PLS3-209ENST00000539310 CDCA7LQ96GN5 454 aa5.93□□□□□ -1.46
PLS3-209ENST00000539310 FAM161AQ3B820 660 aa5.92□□□□□ -1.46
PLS3-209ENST00000539310 PNNQ9H307 717 aaKnown RBP5.92□□□□□ -1.46
PLS3-209ENST00000539310 HSP90AA1P07900 732 aaKnown RBP5.92□□□□□ -1.46
PLS3-209ENST00000539310 PDE3BQ13370 1112 aa5.92□□□□□ -1.46
PLS3-209ENST00000539310 CUX1P39880 1505 aa5.92□□□□□ -1.46
PLS3-209ENST00000539310 POGKQ9P215 609 aa5.91□□□□□ -1.46
PLS3-209ENST00000539310 PEG3Q9GZU2 1588 aa5.91□□□□□ -1.46
PLS3-209ENST00000539310 L1TD1Q5T7N2 865 aaKnown RBP5.91□□□□□ -1.46
PLS3-209ENST00000539310 SLKQ9H2G2 1235 aaPredicted RBP5.91□□□□□ -1.46
PLS3-209ENST00000539310 KDM5BQ9UGL1 1544 aa5.91□□□□□ -1.46
PLS3-209ENST00000539310 RRAGDQ9NQL2 400 aaPredicted RBP5.91□□□□□ -1.46
PLS3-209ENST00000539310 DHX29Q7Z478 1369 aaKnown RBP5.9□□□□□ -1.46
PLS3-209ENST00000539310 ARID3CA6NKF2 412 aa5.9□□□□□ -1.46
PLS3-209ENST00000539310 PTPN23Q9H3S7 1636 aa5.9□□□□□ -1.46
PLS3-209ENST00000539310 CASKIN1Q8WXD9 1431 aa5.9□□□□□ -1.47
PLS3-209ENST00000539310 USP47Q96K76 1375 aa5.9□□□□□ -1.47
PLS3-209ENST00000539310 MYBBP1AQ9BQG0 1328 aaKnown RBP5.9□□□□□ -1.47
PLS3-209ENST00000539310 RALBP1Q15311 655 aa5.9□□□□□ -1.47
PLS3-209ENST00000539310 CENPQQ7L2Z9 268 aaPredicted RBP5.9□□□□□ -1.47
PLS3-209ENST00000539310 BIVM-ERCC5R4GMW8 1640 aa5.89□□□□□ -1.47
PLS3-209ENST00000539310 PCF11O94913 1555 aaKnown RBP5.89□□□□□ -1.47
PLS3-209ENST00000539310 C1QBPQ07021 282 aaKnown RBP5.89□□□□□ -1.47
PLS3-209ENST00000539310 CARD11Q9BXL7 1154 aa5.89□□□□□ -1.47
PLS3-209ENST00000539310 MYOM3Q5VTT5 1437 aa5.89□□□□□ -1.47
PLS3-209ENST00000539310 BECN1Q14457 450 aa5.89□□□□□ -1.47
PLS3-209ENST00000539310 KIF15Q9NS87 1388 aa5.89□□□□□ -1.47
PLS3-209ENST00000539310 ARID4BQ4LE39 1312 aaPredicted RBP5.89□□□□□ -1.47
PLS3-209ENST00000539310 FYCO1Q9BQS8 1478 aa5.88□□□□□ -1.47
PLS3-209ENST00000539310 BRD2P25440 801 aaKnown RBP5.88□□□□□ -1.47
PLS3-209ENST00000539310 TPRNQ4KMQ1 711 aa5.88□□□□□ -1.47
PLS3-209ENST00000539310 C20orf194Q5TEA3 1177 aa5.88□□□□□ -1.47
PLS3-209ENST00000539310 NLRP13Q86W25 1043 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms