RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.54
CCDC144NL-202ENST00000539177 PREX1Q8TCU6 1659 aa24.62■■□□□ 1.53
CCDC144NL-202ENST00000539177 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
CCDC144NL-202ENST00000539177 ARHGEF12Q9NZN5 1544 aa24.58■■□□□ 1.53
CCDC144NL-202ENST00000539177 CERKQ8TCT0 537 aa24.58■■□□□ 1.53
CCDC144NL-202ENST00000539177 PLCH2O75038 1416 aa24.58■■□□□ 1.53
CCDC144NL-202ENST00000539177 C9orf84Q5VXU9 1444 aa24.55■■□□□ 1.52
CCDC144NL-202ENST00000539177 KIF14Q15058 1648 aa24.55■■□□□ 1.52
CCDC144NL-202ENST00000539177 ATP10AO60312 1499 aa24.55■■□□□ 1.52
CCDC144NL-202ENST00000539177 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
CCDC144NL-202ENST00000539177 STRCQ7RTU9 1775 aa24.52■■□□□ 1.52
CCDC144NL-202ENST00000539177 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
CCDC144NL-202ENST00000539177 CEBPAP49715 358 aaPredicted RBP24.5■■□□□ 1.51
CCDC144NL-202ENST00000539177 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
CCDC144NL-202ENST00000539177 ARHGAP5Q13017 1502 aa24.46■■□□□ 1.51
CCDC144NL-202ENST00000539177 EFCAB2Q5VUJ9 269 aa24.46■■□□□ 1.51
CCDC144NL-202ENST00000539177 KDM5CP41229 1560 aa24.45■■□□□ 1.5
CCDC144NL-202ENST00000539177 ZNF518AQ6AHZ1 1483 aa24.45■■□□□ 1.5
CCDC144NL-202ENST00000539177 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
CCDC144NL-202ENST00000539177 CDC42BPBQ9Y5S2 1711 aa24.43■■□□□ 1.5
CCDC144NL-202ENST00000539177 C3P01024 1663 aa24.43■■□□□ 1.5
CCDC144NL-202ENST00000539177 FMN1Q68DA7 1419 aa24.43■■□□□ 1.5
CCDC144NL-202ENST00000539177 ABCA6Q8N139 1617 aa24.43■■□□□ 1.5
CCDC144NL-202ENST00000539177 MYT1LQ9UL68 1186 aa24.42■■□□□ 1.5
CCDC144NL-202ENST00000539177 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
CCDC144NL-202ENST00000539177 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
CCDC144NL-202ENST00000539177 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
CCDC144NL-202ENST00000539177 AFAP1Q8N556 730 aa24.39■■□□□ 1.49
CCDC144NL-202ENST00000539177 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
CCDC144NL-202ENST00000539177 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
CCDC144NL-202ENST00000539177 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
CCDC144NL-202ENST00000539177 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
CCDC144NL-202ENST00000539177 ITSN2Q9NZM3 1697 aa24.35■■□□□ 1.49
CCDC144NL-202ENST00000539177 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
CCDC144NL-202ENST00000539177 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
CCDC144NL-202ENST00000539177 CLIP1P30622 1438 aa24.35■■□□□ 1.49
CCDC144NL-202ENST00000539177 DMRT2Q9Y5R5 561 aa24.32■■□□□ 1.48
CCDC144NL-202ENST00000539177 ABCC1P33527 1531 aa24.3■■□□□ 1.48
CCDC144NL-202ENST00000539177 ILDR2Q71H61 639 aa24.3■■□□□ 1.48
CCDC144NL-202ENST00000539177 MLH3Q9UHC1 1453 aa24.28■■□□□ 1.48
CCDC144NL-202ENST00000539177 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
CCDC144NL-202ENST00000539177 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
CCDC144NL-202ENST00000539177 SPATA31D1Q6ZQQ2 1576 aa24.27■■□□□ 1.48
CCDC144NL-202ENST00000539177 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
CCDC144NL-202ENST00000539177 AGLP35573 1532 aa24.25■■□□□ 1.47
CCDC144NL-202ENST00000539177 PTPRTO14522 1441 aa24.25■■□□□ 1.47
CCDC144NL-202ENST00000539177 ESF1Q9H501 851 aaKnown RBP24.24■■□□□ 1.47
CCDC144NL-202ENST00000539177 LTBP4Q8N2S1 1624 aa24.22■■□□□ 1.47
CCDC144NL-202ENST00000539177 SUPT6HQ7KZ85 1726 aaKnown RBP24.2■■□□□ 1.46
CCDC144NL-202ENST00000539177 MROH2AA6NES4 1674 aa24.18■■□□□ 1.46
CCDC144NL-202ENST00000539177 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
CCDC144NL-202ENST00000539177 SOCS7O14512 581 aa24.17■■□□□ 1.46
CCDC144NL-202ENST00000539177 CCDC18Q5T9S5 1454 aa24.17■■□□□ 1.46
CCDC144NL-202ENST00000539177 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
CCDC144NL-202ENST00000539177 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
CCDC144NL-202ENST00000539177 CNTLNQ9NXG0 1405 aa24.15■■□□□ 1.46
CCDC144NL-202ENST00000539177 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.45
CCDC144NL-202ENST00000539177 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
CCDC144NL-202ENST00000539177 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
CCDC144NL-202ENST00000539177 ZNF777Q9ULD5 760 aaPredicted RBP24.11■■□□□ 1.45
CCDC144NL-202ENST00000539177 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
CCDC144NL-202ENST00000539177 MYO3AQ8NEV4 1616 aa24.1■■□□□ 1.45
CCDC144NL-202ENST00000539177 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.44
CCDC144NL-202ENST00000539177 NPATQ14207 1427 aa24.06■■□□□ 1.44
CCDC144NL-202ENST00000539177 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
CCDC144NL-202ENST00000539177 ZMYM3Q14202 1370 aa24.04■■□□□ 1.44
CCDC144NL-202ENST00000539177 NCKAP5LQ9HCH0 1330 aa24.04■■□□□ 1.44
CCDC144NL-202ENST00000539177 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
CCDC144NL-202ENST00000539177 FYCO1Q9BQS8 1478 aa24.03■■□□□ 1.44
CCDC144NL-202ENST00000539177 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
CCDC144NL-202ENST00000539177 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
CCDC144NL-202ENST00000539177 ZNF335Q9H4Z2 1342 aaPredicted RBP24.02■■□□□ 1.44
CCDC144NL-202ENST00000539177 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
CCDC144NL-202ENST00000539177 CEP170BQ9Y4F5 1589 aaPredicted RBP24.01■■□□□ 1.43
CCDC144NL-202ENST00000539177 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■■■□ 22.6
CCDC144NL-202ENST00000539177 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
CCDC144NL-202ENST00000539177 A2MP01023 1474 aa23.97■■□□□ 1.43
CCDC144NL-202ENST00000539177 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
CCDC144NL-202ENST00000539177 PLA2R1Q13018 1463 aa23.95■■□□□ 1.42
CCDC144NL-202ENST00000539177 UBAP1LF5GYI3 381 aa23.95■■□□□ 1.42
CCDC144NL-202ENST00000539177 PTPRKQ15262 1439 aa23.94■■□□□ 1.42
CCDC144NL-202ENST00000539177 GGT6Q6P531 493 aa23.93■■□□□ 1.42
CCDC144NL-202ENST00000539177 TCOF1Q13428 1488 aaKnown RBP23.93■■□□□ 1.42
CCDC144NL-202ENST00000539177 PLEKHH2Q8IVE3 1493 aa23.92■■□□□ 1.42
CCDC144NL-202ENST00000539177 POLR1AO95602 1720 aaPredicted RBP23.91■■□□□ 1.42
CCDC144NL-202ENST00000539177 KIAA1107Q9UPP5 1409 aa23.91■■□□□ 1.42
CCDC144NL-202ENST00000539177 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
CCDC144NL-202ENST00000539177 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
CCDC144NL-202ENST00000539177 PKD2Q13563 968 aa23.89■■□□□ 1.41
CCDC144NL-202ENST00000539177 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
CCDC144NL-202ENST00000539177 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
CCDC144NL-202ENST00000539177 PPP6R1Q9UPN7 881 aa23.85■■□□□ 1.41
CCDC144NL-202ENST00000539177 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
CCDC144NL-202ENST00000539177 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.41
CCDC144NL-202ENST00000539177 NEURL4Q96JN8 1562 aa23.81■■□□□ 1.4
CCDC144NL-202ENST00000539177 ZNF644Q9H582 1327 aaPredicted RBP23.81■■□□□ 1.4
CCDC144NL-202ENST00000539177 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
CCDC144NL-202ENST00000539177 MED1Q15648 1581 aaPredicted RBP23.78■■□□□ 1.4
CCDC144NL-202ENST00000539177 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
CCDC144NL-202ENST00000539177 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms