RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 RRP7BPQ9NSQ0 103 aa21.61■■□□□ 1.05
ATL3-203ENST00000538786 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
ATL3-203ENST00000538786 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
ATL3-203ENST00000538786 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
ATL3-203ENST00000538786 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
ATL3-203ENST00000538786 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
ATL3-203ENST00000538786 UHRF1BP1LA0JNW5 1464 aa21.53■■□□□ 1.04
ATL3-203ENST00000538786 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
ATL3-203ENST00000538786 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
ATL3-203ENST00000538786 KDM6BO15054 1643 aa21.5■■□□□ 1.03
ATL3-203ENST00000538786 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
ATL3-203ENST00000538786 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
ATL3-203ENST00000538786 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
ATL3-203ENST00000538786 KDM5BQ9UGL1 1544 aa21.46■■□□□ 1.03
ATL3-203ENST00000538786 NCOA1Q15788 1441 aa21.45■■□□□ 1.02
ATL3-203ENST00000538786 TRIM52Q96A61 297 aa21.45■■□□□ 1.02
ATL3-203ENST00000538786 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
ATL3-203ENST00000538786 SHANK2Q9UPX8 1470 aa21.44■■□□□ 1.02
ATL3-203ENST00000538786 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
ATL3-203ENST00000538786 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
ATL3-203ENST00000538786 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
ATL3-203ENST00000538786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.41■■□□□ 1.02
ATL3-203ENST00000538786 DENND4BO75064 1496 aaPredicted RBP21.41■■□□□ 1.02
ATL3-203ENST00000538786 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
ATL3-203ENST00000538786 TTC37Q6PGP7 1564 aa21.39■■□□□ 1.02
ATL3-203ENST00000538786 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
ATL3-203ENST00000538786 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
ATL3-203ENST00000538786 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
ATL3-203ENST00000538786 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
ATL3-203ENST00000538786 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
ATL3-203ENST00000538786 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
ATL3-203ENST00000538786 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
ATL3-203ENST00000538786 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
ATL3-203ENST00000538786 TSPY4P0CV99 314 aa21.35■■□□□ 1.01
ATL3-203ENST00000538786 TSPY10P0CW01 314 aa21.35■■□□□ 1.01
ATL3-203ENST00000538786 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
ATL3-203ENST00000538786 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
ATL3-203ENST00000538786 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
ATL3-203ENST00000538786 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
ATL3-203ENST00000538786 KCNH8Q96L42 1107 aa21.33■■□□□ 1
ATL3-203ENST00000538786 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
ATL3-203ENST00000538786 ANKRD50Q9ULJ7 1429 aa21.31■■□□□ 1
ATL3-203ENST00000538786 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
ATL3-203ENST00000538786 PLCH2O75038 1416 aa21.3■■□□□ 1
ATL3-203ENST00000538786 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
ATL3-203ENST00000538786 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
ATL3-203ENST00000538786 SYCP2Q9BX26 1530 aa21.27■■□□□ 1
ATL3-203ENST00000538786 PZPP20742 1482 aa21.27■■□□□ 1
ATL3-203ENST00000538786 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
ATL3-203ENST00000538786 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
ATL3-203ENST00000538786 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
ATL3-203ENST00000538786 MAST1Q9Y2H9 1570 aa21.24■□□□□ 0.99
ATL3-203ENST00000538786 EFCAB2Q5VUJ9 269 aa21.23■□□□□ 0.99
ATL3-203ENST00000538786 FOXD1Q16676 465 aa21.23■□□□□ 0.99
ATL3-203ENST00000538786 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
ATL3-203ENST00000538786 RPRD2Q5VT52 1461 aaKnown RBP21.19■□□□□ 0.98
ATL3-203ENST00000538786 KDM5DQ9BY66 1539 aa21.18■□□□□ 0.98
ATL3-203ENST00000538786 ARHGEF12Q9NZN5 1544 aa21.18■□□□□ 0.98
ATL3-203ENST00000538786 ABCC1P33527 1531 aa21.16■□□□□ 0.98
ATL3-203ENST00000538786 NUP155O75694 1391 aa21.16■□□□□ 0.98
ATL3-203ENST00000538786 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
ATL3-203ENST00000538786 MIER1Q8N108 512 aa21.16■□□□□ 0.98
ATL3-203ENST00000538786 PLXNC1O60486 1568 aa21.15■□□□□ 0.98
ATL3-203ENST00000538786 ABCA9Q8IUA7 1624 aa21.14■□□□□ 0.97
ATL3-203ENST00000538786 PKD2Q13563 968 aa21.14■□□□□ 0.97
ATL3-203ENST00000538786 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
ATL3-203ENST00000538786 L3MBTL2Q969R5 705 aa21.12■□□□□ 0.97
ATL3-203ENST00000538786 TEX14Q8IWB6 1497 aa21.09■□□□□ 0.97
ATL3-203ENST00000538786 TRAPPC8Q9Y2L5 1435 aa21.09■□□□□ 0.97
ATL3-203ENST00000538786 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.97
ATL3-203ENST00000538786 FANCAO15360 1455 aa21.07■□□□□ 0.96
ATL3-203ENST00000538786 ERBINQ96RT1 1412 aa21.06■□□□□ 0.96
ATL3-203ENST00000538786 UNC13BO14795 1591 aa21.05■□□□□ 0.96
ATL3-203ENST00000538786 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
ATL3-203ENST00000538786 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
ATL3-203ENST00000538786 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.96
ATL3-203ENST00000538786 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
ATL3-203ENST00000538786 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
ATL3-203ENST00000538786 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
ATL3-203ENST00000538786 AFAP1Q8N556 730 aa21■□□□□ 0.95
ATL3-203ENST00000538786 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
ATL3-203ENST00000538786 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
ATL3-203ENST00000538786 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
ATL3-203ENST00000538786 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
ATL3-203ENST00000538786 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
ATL3-203ENST00000538786 IQGAP3Q86VI3 1631 aa20.96■□□□□ 0.95
ATL3-203ENST00000538786 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
ATL3-203ENST00000538786 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
ATL3-203ENST00000538786 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
ATL3-203ENST00000538786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.941e-7■■■■□ 24.1
ATL3-203ENST00000538786 ATP7AQ04656 1500 aa20.93■□□□□ 0.94
ATL3-203ENST00000538786 EIF4G2P78344 907 aaKnown RBP eCLIP20.93■□□□□ 0.94
ATL3-203ENST00000538786 CD109Q6YHK3 1445 aa20.93■□□□□ 0.94
ATL3-203ENST00000538786 CENPBP07199 599 aaPredicted RBP20.92■□□□□ 0.94
ATL3-203ENST00000538786 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
ATL3-203ENST00000538786 CFAP74Q9C0B2 1584 aa20.89■□□□□ 0.94
ATL3-203ENST00000538786 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
ATL3-203ENST00000538786 UHRF1BP1Q6BDS2 1440 aa20.87■□□□□ 0.93
ATL3-203ENST00000538786 ZNF518AQ6AHZ1 1483 aa20.87■□□□□ 0.93
ATL3-203ENST00000538786 ATP10AO60312 1499 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms