RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
SH2B3-202ENST00000538307 TRIM52Q96A61 297 aa23.74■■□□□ 1.39
SH2B3-202ENST00000538307 NUP153P49790 1475 aaKnown RBP23.7■■□□□ 1.39
SH2B3-202ENST00000538307 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
SH2B3-202ENST00000538307 SHROOM2Q13796 1616 aa23.69■■□□□ 1.38
SH2B3-202ENST00000538307 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
SH2B3-202ENST00000538307 DAPK1P53355 1430 aa23.68■■□□□ 1.38
SH2B3-202ENST00000538307 RAPGEF6Q8TEU7 1601 aa23.67■■□□□ 1.38
SH2B3-202ENST00000538307 DNMT1P26358 1616 aaKnown RBP23.65■■□□□ 1.38
SH2B3-202ENST00000538307 ABCC5O15440 1437 aa23.65■■□□□ 1.38
SH2B3-202ENST00000538307 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
SH2B3-202ENST00000538307 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
SH2B3-202ENST00000538307 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
SH2B3-202ENST00000538307 PTPRGP23470 1445 aa23.59■■□□□ 1.37
SH2B3-202ENST00000538307 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
SH2B3-202ENST00000538307 L3MBTL2Q969R5 705 aa23.58■■□□□ 1.36
SH2B3-202ENST00000538307 WASHC2AQ641Q2 1341 aa23.57■■□□□ 1.36
SH2B3-202ENST00000538307 ANKRD30BQ9BXX2 1392 aa23.57■■□□□ 1.36
SH2B3-202ENST00000538307 FOXD1Q16676 465 aa23.56■■□□□ 1.36
SH2B3-202ENST00000538307 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
SH2B3-202ENST00000538307 EIF4G2P78344 907 aaKnown RBP eCLIP23.55■■□□□ 1.36
SH2B3-202ENST00000538307 RPRD2Q5VT52 1461 aaKnown RBP23.53■■□□□ 1.36
SH2B3-202ENST00000538307 FKBP8Q14318 412 aa23.52■■□□□ 1.36
SH2B3-202ENST00000538307 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
SH2B3-202ENST00000538307 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
SH2B3-202ENST00000538307 TEX14Q8IWB6 1497 aa23.48■■□□□ 1.35
SH2B3-202ENST00000538307 ITSN2Q9NZM3 1697 aa23.47■■□□□ 1.35
SH2B3-202ENST00000538307 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
SH2B3-202ENST00000538307 TSHZ2Q9NRE2 1034 aa23.47■■□□□ 1.35
SH2B3-202ENST00000538307 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
SH2B3-202ENST00000538307 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
SH2B3-202ENST00000538307 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
SH2B3-202ENST00000538307 BCANQ96GW7 911 aa23.45■■□□□ 1.34
SH2B3-202ENST00000538307 NCOA1Q15788 1441 aa23.44■■□□□ 1.34
SH2B3-202ENST00000538307 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
SH2B3-202ENST00000538307 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
SH2B3-202ENST00000538307 PZPP20742 1482 aa23.43■■□□□ 1.34
SH2B3-202ENST00000538307 ABCA8O94911 1581 aa23.43■■□□□ 1.34
SH2B3-202ENST00000538307 KIF14Q15058 1648 aa23.43■■□□□ 1.34
SH2B3-202ENST00000538307 NEFLP07196 543 aa23.43■■□□□ 1.34
SH2B3-202ENST00000538307 ADGBQ8N7X0 1667 aa23.42■■□□□ 1.34
SH2B3-202ENST00000538307 ADGRL2O95490 1459 aa23.41■■□□□ 1.34
SH2B3-202ENST00000538307 C11orf95C9JLR9 678 aaPredicted RBP23.41■■□□□ 1.34
SH2B3-202ENST00000538307 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
SH2B3-202ENST00000538307 MYT1Q01538 1121 aa23.4■■□□□ 1.34
SH2B3-202ENST00000538307 CROCC2H7BZ55 1655 aa23.39■■□□□ 1.33
SH2B3-202ENST00000538307 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
SH2B3-202ENST00000538307 ZNF777Q9ULD5 760 aaPredicted RBP23.36■■□□□ 1.33
SH2B3-202ENST00000538307 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
SH2B3-202ENST00000538307 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
SH2B3-202ENST00000538307 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.33
SH2B3-202ENST00000538307 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
SH2B3-202ENST00000538307 ATP10BO94823 1461 aa23.31■■□□□ 1.32
SH2B3-202ENST00000538307 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
SH2B3-202ENST00000538307 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
SH2B3-202ENST00000538307 PRKRIP1Q9H875 184 aaPredicted RBP23.3■■□□□ 1.32
SH2B3-202ENST00000538307 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
SH2B3-202ENST00000538307 POLR1AO95602 1720 aaPredicted RBP23.29■■□□□ 1.32
SH2B3-202ENST00000538307 KIF7Q2M1P5 1343 aa23.28■■□□□ 1.32
SH2B3-202ENST00000538307 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
SH2B3-202ENST00000538307 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
SH2B3-202ENST00000538307 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
SH2B3-202ENST00000538307 CCDC184Q52MB2 194 aa23.28■■□□□ 1.32
SH2B3-202ENST00000538307 PKD2Q13563 968 aa23.26■■□□□ 1.31
SH2B3-202ENST00000538307 SHANK2Q9UPX8 1470 aa23.26■■□□□ 1.31
SH2B3-202ENST00000538307 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
SH2B3-202ENST00000538307 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
SH2B3-202ENST00000538307 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
SH2B3-202ENST00000538307 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
SH2B3-202ENST00000538307 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
SH2B3-202ENST00000538307 NPM1P06748 294 aaKnown RBP eCLIP23.19■■□□□ 1.3
SH2B3-202ENST00000538307 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
SH2B3-202ENST00000538307 NUP155O75694 1391 aa23.17■■□□□ 1.3
SH2B3-202ENST00000538307 ZCCHC11Q5TAX3 1644 aaKnown RBP23.17■■□□□ 1.3
SH2B3-202ENST00000538307 KDM5DQ9BY66 1539 aa23.16■■□□□ 1.3
SH2B3-202ENST00000538307 USP47Q96K76 1375 aa23.16■■□□□ 1.3
SH2B3-202ENST00000538307 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
SH2B3-202ENST00000538307 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
SH2B3-202ENST00000538307 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
SH2B3-202ENST00000538307 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
SH2B3-202ENST00000538307 ARHGEF5Q12774 1597 aa23.14■■□□□ 1.29
SH2B3-202ENST00000538307 BCORL1Q5H9F3 1711 aa23.13■■□□□ 1.29
SH2B3-202ENST00000538307 KDM5CP41229 1560 aa23.13■■□□□ 1.29
SH2B3-202ENST00000538307 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
SH2B3-202ENST00000538307 DHX29Q7Z478 1369 aaKnown RBP23.11■■□□□ 1.29
SH2B3-202ENST00000538307 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.293e-12■■■■■ 47.2
SH2B3-202ENST00000538307 ARHGEF12Q9NZN5 1544 aa23.1■■□□□ 1.29
SH2B3-202ENST00000538307 ARID4BQ4LE39 1312 aaPredicted RBP23.1■■□□□ 1.29
SH2B3-202ENST00000538307 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
SH2B3-202ENST00000538307 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
SH2B3-202ENST00000538307 ZBED9Q6R2W3 1325 aa23.1■■□□□ 1.29
SH2B3-202ENST00000538307 ERICH6BQ5W0A0 696 aa23.06■■□□□ 1.28
SH2B3-202ENST00000538307 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
SH2B3-202ENST00000538307 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
SH2B3-202ENST00000538307 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
SH2B3-202ENST00000538307 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
SH2B3-202ENST00000538307 CDC42BPBQ9Y5S2 1711 aa23.04■■□□□ 1.28
SH2B3-202ENST00000538307 RBM19Q9Y4C8 960 aaKnown RBP23.04■■□□□ 1.28
SH2B3-202ENST00000538307 RSPH4AQ5TD94 716 aa23.02■■□□□ 1.28
SH2B3-202ENST00000538307 ASXL2Q76L83 1435 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms