RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
CPSF7-218ENST00000537641 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
CPSF7-218ENST00000537641 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-218ENST00000537641 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
CPSF7-218ENST00000537641 CDK11AQ9UQ88 783 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-218ENST00000537641 ITSN2Q9NZM3 1697 aa16.87■□□□□ 0.29
CPSF7-218ENST00000537641 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
CPSF7-218ENST00000537641 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-218ENST00000537641 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-218ENST00000537641 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
CPSF7-218ENST00000537641 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
CPSF7-218ENST00000537641 FBLN2P98095 1184 aa16.83■□□□□ 0.28
CPSF7-218ENST00000537641 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
CPSF7-218ENST00000537641 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.28
CPSF7-218ENST00000537641 DAPK1P53355 1430 aa16.82■□□□□ 0.28
CPSF7-218ENST00000537641 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
CPSF7-218ENST00000537641 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
CPSF7-218ENST00000537641 ROCK1Q13464 1354 aa16.82■□□□□ 0.28
CPSF7-218ENST00000537641 KDM6BO15054 1643 aa16.82■□□□□ 0.28
CPSF7-218ENST00000537641 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
CPSF7-218ENST00000537641 ABCA8O94911 1581 aa16.81■□□□□ 0.28
CPSF7-218ENST00000537641 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
CPSF7-218ENST00000537641 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
CPSF7-218ENST00000537641 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
CPSF7-218ENST00000537641 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
CPSF7-218ENST00000537641 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-218ENST00000537641 KIF14Q15058 1648 aa16.78■□□□□ 0.28
CPSF7-218ENST00000537641 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
CPSF7-218ENST00000537641 ABCC5O15440 1437 aa16.77■□□□□ 0.28
CPSF7-218ENST00000537641 CROCC2H7BZ55 1655 aa16.77■□□□□ 0.27
CPSF7-218ENST00000537641 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
CPSF7-218ENST00000537641 CCDC7Q96M83 1385 aa16.76■□□□□ 0.27
CPSF7-218ENST00000537641 CHD1O14646 1710 aa16.76■□□□□ 0.27
CPSF7-218ENST00000537641 RPRD2Q5VT52 1461 aaKnown RBP16.75■□□□□ 0.27
CPSF7-218ENST00000537641 GPATCH8Q9UKJ3 1502 aaKnown RBP16.74■□□□□ 0.27
CPSF7-218ENST00000537641 TEX14Q8IWB6 1497 aa16.74■□□□□ 0.27
CPSF7-218ENST00000537641 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
CPSF7-218ENST00000537641 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
CPSF7-218ENST00000537641 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
CPSF7-218ENST00000537641 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
CPSF7-218ENST00000537641 MSH5O43196 834 aa16.7■□□□□ 0.26
CPSF7-218ENST00000537641 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
CPSF7-218ENST00000537641 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-218ENST00000537641 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-218ENST00000537641 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
CPSF7-218ENST00000537641 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
CPSF7-218ENST00000537641 ANKRD30BQ9BXX2 1392 aa16.69■□□□□ 0.26
CPSF7-218ENST00000537641 ATP10BO94823 1461 aa16.69■□□□□ 0.26
CPSF7-218ENST00000537641 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
CPSF7-218ENST00000537641 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
CPSF7-218ENST00000537641 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
CPSF7-218ENST00000537641 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
CPSF7-218ENST00000537641 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
CPSF7-218ENST00000537641 PTPRGP23470 1445 aa16.64■□□□□ 0.25
CPSF7-218ENST00000537641 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-218ENST00000537641 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
CPSF7-218ENST00000537641 ERICH6Q7L0X2 663 aa16.63■□□□□ 0.25
CPSF7-218ENST00000537641 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
CPSF7-218ENST00000537641 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
CPSF7-218ENST00000537641 MRS2Q9HD23 443 aa16.62■□□□□ 0.25
CPSF7-218ENST00000537641 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
CPSF7-218ENST00000537641 C11orf95C9JLR9 678 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-218ENST00000537641 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 SMG6Q86US8 1419 aaKnown RBP16.59■□□□□ 0.25
CPSF7-218ENST00000537641 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 PZPP20742 1482 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
CPSF7-218ENST00000537641 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-218ENST00000537641 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
CPSF7-218ENST00000537641 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
CPSF7-218ENST00000537641 KDM5CP41229 1560 aa16.56■□□□□ 0.24
CPSF7-218ENST00000537641 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
CPSF7-218ENST00000537641 C9orf84Q5VXU9 1444 aa16.55■□□□□ 0.24
CPSF7-218ENST00000537641 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-218ENST00000537641 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
CPSF7-218ENST00000537641 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
CPSF7-218ENST00000537641 FOXD1Q16676 465 aa16.53■□□□□ 0.24
CPSF7-218ENST00000537641 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
CPSF7-218ENST00000537641 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
CPSF7-218ENST00000537641 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
CPSF7-218ENST00000537641 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.24
CPSF7-218ENST00000537641 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.23
CPSF7-218ENST00000537641 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
CPSF7-218ENST00000537641 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
CPSF7-218ENST00000537641 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
CPSF7-218ENST00000537641 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
CPSF7-218ENST00000537641 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
CPSF7-218ENST00000537641 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
CPSF7-218ENST00000537641 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
CPSF7-218ENST00000537641 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
CPSF7-218ENST00000537641 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
CPSF7-218ENST00000537641 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
CPSF7-218ENST00000537641 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
CPSF7-218ENST00000537641 USP47Q96K76 1375 aa16.48■□□□□ 0.23
CPSF7-218ENST00000537641 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
CPSF7-218ENST00000537641 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
CPSF7-218ENST00000537641 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
CPSF7-218ENST00000537641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms