RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 FHOD3Q2V2M9 1422 aa8.85□□□□□ -0.99
SNHG1-204ENST00000537068 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
SNHG1-204ENST00000537068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNHG1-204ENST00000537068 CFAP74Q9C0B2 1584 aa8.84□□□□□ -0.99
SNHG1-204ENST00000537068 MADDQ8WXG6 1647 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 SIGLEC1Q9BZZ2 1709 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 AKNAQ7Z591 1439 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.83□□□□□ -1
SNHG1-204ENST00000537068 HNRNPUL2Q1KMD3 747 aaKnown RBP8.83□□□□□ -1
SNHG1-204ENST00000537068 ZMYM4Q5VZL5 1548 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 ARHGEF40Q8TER5 1519 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 FANCAO15360 1455 aa8.83□□□□□ -1
SNHG1-204ENST00000537068 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
SNHG1-204ENST00000537068 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
SNHG1-204ENST00000537068 MAGI2Q86UL8 1455 aa8.8□□□□□ -1
SNHG1-204ENST00000537068 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
SNHG1-204ENST00000537068 PCF11O94913 1555 aaKnown RBP8.8□□□□□ -1
SNHG1-204ENST00000537068 RIMS1Q86UR5 1692 aaKnown RBP8.8□□□□□ -1
SNHG1-204ENST00000537068 PLCH2O75038 1416 aa8.8□□□□□ -1
SNHG1-204ENST00000537068 MYCNP04198 464 aaPredicted RBP8.79□□□□□ -1
SNHG1-204ENST00000537068 LRRIQ1Q96JM4 1722 aa8.79□□□□□ -1
SNHG1-204ENST00000537068 HECW1Q76N89 1606 aa8.79□□□□□ -1
SNHG1-204ENST00000537068 MYO5CQ9NQX4 1742 aa8.78□□□□□ -1
SNHG1-204ENST00000537068 CDK13Q14004 1512 aaKnown RBP8.78□□□□□ -1
SNHG1-204ENST00000537068 ZFYVE16Q7Z3T8 1539 aa8.77□□□□□ -1.01
SNHG1-204ENST00000537068 RANGAP1P46060 587 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-204ENST00000537068 FBXO41Q8TF61 875 aa8.77□□□□□ -1.01
SNHG1-204ENST00000537068 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
SNHG1-204ENST00000537068 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1.01
SNHG1-204ENST00000537068 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
SNHG1-204ENST00000537068 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
SNHG1-204ENST00000537068 ARID4BQ4LE39 1312 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-204ENST00000537068 CDC42BPBQ9Y5S2 1711 aa8.75□□□□□ -1.01
SNHG1-204ENST00000537068 POGZQ7Z3K3 1410 aa8.75□□□□□ -1.01
SNHG1-204ENST00000537068 SCAPERQ9BY12 1400 aa8.75□□□□□ -1.01
SNHG1-204ENST00000537068 KIF14Q15058 1648 aa8.74□□□□□ -1.01
SNHG1-204ENST00000537068 ATP10AO60312 1499 aa8.74□□□□□ -1.01
SNHG1-204ENST00000537068 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
SNHG1-204ENST00000537068 KDM5CP41229 1560 aa8.73□□□□□ -1.01
SNHG1-204ENST00000537068 SETD1BQ9UPS6 1966 aaKnown RBP8.73□□□□□ -1.01
SNHG1-204ENST00000537068 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
SNHG1-204ENST00000537068 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-204ENST00000537068 REREQ9P2R6 1566 aa8.72□□□□□ -1.01
SNHG1-204ENST00000537068 PREX1Q8TCU6 1659 aa8.72□□□□□ -1.01
SNHG1-204ENST00000537068 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.01
SNHG1-204ENST00000537068 C9orf84Q5VXU9 1444 aa8.71□□□□□ -1.01
SNHG1-204ENST00000537068 ZNF518AQ6AHZ1 1483 aa8.71□□□□□ -1.01
SNHG1-204ENST00000537068 UBTFP17480 764 aaKnown RBP8.7□□□□□ -1.02
SNHG1-204ENST00000537068 U3KPZ7 1027 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-204ENST00000537068 STRCQ7RTU9 1775 aa8.7□□□□□ -1.02
SNHG1-204ENST00000537068 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
SNHG1-204ENST00000537068 CDC42BPAQ5VT25 1732 aa8.69□□□□□ -1.02
SNHG1-204ENST00000537068 HSPA2P54652 639 aa8.69□□□□□ -1.02
SNHG1-204ENST00000537068 MLH3Q9UHC1 1453 aa8.69□□□□□ -1.02
SNHG1-204ENST00000537068 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
SNHG1-204ENST00000537068 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
SNHG1-204ENST00000537068 AFAP1Q8N556 730 aa8.68□□□□□ -1.02
SNHG1-204ENST00000537068 ARHGAP5Q13017 1502 aa8.68□□□□□ -1.02
SNHG1-204ENST00000537068 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
SNHG1-204ENST00000537068 KIDINS220Q9ULH0 1771 aa8.68□□□□□ -1.02
SNHG1-204ENST00000537068 C3P01024 1663 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 CLIP1P30622 1438 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 AGLP35573 1532 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 MLECQ14165 292 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 ABCA6Q8N139 1617 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 CASKIN1Q8WXD9 1431 aa8.67□□□□□ -1.02
SNHG1-204ENST00000537068 ABCC1P33527 1531 aa8.66□□□□□ -1.02
SNHG1-204ENST00000537068 CCDC18Q5T9S5 1454 aa8.66□□□□□ -1.02
SNHG1-204ENST00000537068 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-204ENST00000537068 CEBPAP49715 358 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-204ENST00000537068 TRAPPC8Q9Y2L5 1435 aa8.64□□□□□ -1.03
SNHG1-204ENST00000537068 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
SNHG1-204ENST00000537068 FYCO1Q9BQS8 1478 aa8.63□□□□□ -1.03
SNHG1-204ENST00000537068 MROH2AA6NES4 1674 aa8.62□□□□□ -1.03
SNHG1-204ENST00000537068 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
SNHG1-204ENST00000537068 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-204ENST00000537068 UHRF1BP1Q6BDS2 1440 aa8.62□□□□□ -1.03
SNHG1-204ENST00000537068 GPATCH8Q9UKJ3 1502 aaKnown RBP8.6□□□□□ -1.03
SNHG1-204ENST00000537068 PTPRTO14522 1441 aa8.6□□□□□ -1.03
SNHG1-204ENST00000537068 CNTLNQ9NXG0 1405 aa8.59□□□□□ -1.03
SNHG1-204ENST00000537068 KIAA1107Q9UPP5 1409 aa8.59□□□□□ -1.03
SNHG1-204ENST00000537068 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-204ENST00000537068 SUPT6HQ7KZ85 1726 aaKnown RBP8.59□□□□□ -1.03
SNHG1-204ENST00000537068 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
SNHG1-204ENST00000537068 PLXNC1O60486 1568 aa8.58□□□□□ -1.04
SNHG1-204ENST00000537068 NPATQ14207 1427 aa8.58□□□□□ -1.04
SNHG1-204ENST00000537068 SYCP2Q9BX26 1530 aa8.58□□□□□ -1.04
SNHG1-204ENST00000537068 DSG3P32926 999 aa8.57□□□□□ -1.04
SNHG1-204ENST00000537068 ATP7AQ04656 1500 aa8.57□□□□□ -1.04
SNHG1-204ENST00000537068 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-204ENST00000537068 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
SNHG1-204ENST00000537068 SPINK5Q9NQ38 1064 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-204ENST00000537068 MYT1LQ9UL68 1186 aa8.56□□□□□ -1.04
SNHG1-204ENST00000537068 ZMYM3Q14202 1370 aa8.56□□□□□ -1.04
SNHG1-204ENST00000537068 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
SNHG1-204ENST00000537068 CLTCQ00610 1675 aaKnown RBP8.56□□□□□ -1.04
SNHG1-204ENST00000537068 NCOA1Q15788 1441 aa8.55□□□□□ -1.04
SNHG1-204ENST00000537068 HNRNPMP52272 730 aaKnown RBP eCLIP8.55□□□□□ -1.04
SNHG1-204ENST00000537068 IQSEC2Q5JU85 1478 aa8.55□□□□□ -1.04
SNHG1-204ENST00000537068 A2MP01023 1474 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms