RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
USP30-208ENST00000536393 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
USP30-208ENST00000536393 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
USP30-208ENST00000536393 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
USP30-208ENST00000536393 ROCK2O75116 1388 aaKnown RBP9.21□□□□□ -0.94
USP30-208ENST00000536393 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
USP30-208ENST00000536393 KDM5BQ9UGL1 1544 aa9.21□□□□□ -0.94
USP30-208ENST00000536393 EIF4G2P78344 907 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP30-208ENST00000536393 NCOA1Q15788 1441 aa9.2□□□□□ -0.94
USP30-208ENST00000536393 RPRD2Q5VT52 1461 aaKnown RBP9.2□□□□□ -0.94
USP30-208ENST00000536393 RANGAP1P46060 587 aaPredicted RBP9.19□□□□□ -0.94
USP30-208ENST00000536393 DDX10Q13206 875 aaKnown RBP9.19□□□□□ -0.94
USP30-208ENST00000536393 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
USP30-208ENST00000536393 INSRP06213 1382 aa9.19□□□□□ -0.94
USP30-208ENST00000536393 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
USP30-208ENST00000536393 NESP48681 1621 aa9.19□□□□□ -0.94
USP30-208ENST00000536393 EPRSP07814 1512 aaKnown RBP9.18□□□□□ -0.94
USP30-208ENST00000536393 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
USP30-208ENST00000536393 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
USP30-208ENST00000536393 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
USP30-208ENST00000536393 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
USP30-208ENST00000536393 ZBTB12Q9Y330 459 aaPredicted RBP9.18□□□□□ -0.94
USP30-208ENST00000536393 WDR62O43379 1518 aa9.17□□□□□ -0.94
USP30-208ENST00000536393 ADGRL2O95490 1459 aa9.17□□□□□ -0.94
USP30-208ENST00000536393 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
USP30-208ENST00000536393 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
USP30-208ENST00000536393 ADAMTS12P58397 1594 aa9.16□□□□□ -0.94
USP30-208ENST00000536393 FKBP8Q14318 412 aa9.16□□□□□ -0.94
USP30-208ENST00000536393 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
USP30-208ENST00000536393 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
USP30-208ENST00000536393 ITGAEP38570 1179 aa9.15□□□□□ -0.94
USP30-208ENST00000536393 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
USP30-208ENST00000536393 PBRM1Q86U86 1689 aa9.15□□□□□ -0.94
USP30-208ENST00000536393 KIAA0586Q9BVV6 1533 aa9.15□□□□□ -0.95
USP30-208ENST00000536393 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.95
USP30-208ENST00000536393 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.95
USP30-208ENST00000536393 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
USP30-208ENST00000536393 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
USP30-208ENST00000536393 SIN3AQ96ST3 1273 aa9.14□□□□□ -0.95
USP30-208ENST00000536393 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
USP30-208ENST00000536393 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
USP30-208ENST00000536393 ANKRD30BQ9BXX2 1392 aa9.13□□□□□ -0.95
USP30-208ENST00000536393 IFT140Q96RY7 1462 aa9.13□□□□□ -0.95
USP30-208ENST00000536393 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
USP30-208ENST00000536393 TEX14Q8IWB6 1497 aa9.12□□□□□ -0.95
USP30-208ENST00000536393 DAPK1P53355 1430 aa9.12□□□□□ -0.95
USP30-208ENST00000536393 UHRF1BP1Q6BDS2 1440 aa9.12□□□□□ -0.95
USP30-208ENST00000536393 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
USP30-208ENST00000536393 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
USP30-208ENST00000536393 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
USP30-208ENST00000536393 KIF14Q15058 1648 aa9.09□□□□□ -0.95
USP30-208ENST00000536393 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
USP30-208ENST00000536393 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
USP30-208ENST00000536393 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
USP30-208ENST00000536393 MBD5Q9P267 1494 aa9.08□□□□□ -0.96
USP30-208ENST00000536393 WASHC2AQ641Q2 1341 aa9.08□□□□□ -0.96
USP30-208ENST00000536393 WASHC2CQ9Y4E1 1318 aa9.08□□□□□ -0.96
USP30-208ENST00000536393 TROQ12816 1431 aaPredicted RBP9.08□□□□□ -0.96
USP30-208ENST00000536393 SMG6Q86US8 1419 aaKnown RBP9.08□□□□□ -0.96
USP30-208ENST00000536393 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
USP30-208ENST00000536393 RAPGEF6Q8TEU7 1601 aa9.08□□□□□ -0.96
USP30-208ENST00000536393 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
USP30-208ENST00000536393 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
USP30-208ENST00000536393 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
USP30-208ENST00000536393 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
USP30-208ENST00000536393 MAGI3Q5TCQ9 1506 aa9.07□□□□□ -0.96
USP30-208ENST00000536393 KIAA1107Q9UPP5 1409 aa9.06□□□□□ -0.96
USP30-208ENST00000536393 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
USP30-208ENST00000536393 HNRNPUQ00839 825 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP30-208ENST00000536393 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
USP30-208ENST00000536393 ABCC5O15440 1437 aa9.05□□□□□ -0.96
USP30-208ENST00000536393 ANKRD30AQ9BXX3 1397 aa9.05□□□□□ -0.96
USP30-208ENST00000536393 LAMC1P11047 1609 aa9.05□□□□□ -0.96
USP30-208ENST00000536393 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
USP30-208ENST00000536393 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
USP30-208ENST00000536393 STAC3Q96MF2 364 aa9.04□□□□□ -0.96
USP30-208ENST00000536393 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
USP30-208ENST00000536393 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
USP30-208ENST00000536393 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
USP30-208ENST00000536393 PLEKHH2Q8IVE3 1493 aa9.03□□□□□ -0.96
USP30-208ENST00000536393 TDRD9Q8NDG6 1382 aaKnown RBP9.03□□□□□ -0.96
USP30-208ENST00000536393 BRD4O60885 1362 aaPredicted RBP9.02□□□□□ -0.97
USP30-208ENST00000536393 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
USP30-208ENST00000536393 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
USP30-208ENST00000536393 RALBP1Q15311 655 aa9.02□□□□□ -0.97
USP30-208ENST00000536393 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
USP30-208ENST00000536393 PTPRGP23470 1445 aa9.02□□□□□ -0.97
USP30-208ENST00000536393 NUP153P49790 1475 aaKnown RBP9.02□□□□□ -0.97
USP30-208ENST00000536393 KIF15Q9NS87 1388 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 KDM5CP41229 1560 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
USP30-208ENST00000536393 NUDCQ9Y266 331 aa9□□□□□ -0.97
USP30-208ENST00000536393 PZPP20742 1482 aa9□□□□□ -0.97
USP30-208ENST00000536393 CAMSAP2Q08AD1 1489 aa9□□□□□ -0.97
USP30-208ENST00000536393 NUP160Q12769 1436 aa8.99□□□□□ -0.97
USP30-208ENST00000536393 FBLN2P98095 1184 aa8.99□□□□□ -0.97
USP30-208ENST00000536393 EIF2AK4Q9P2K8 1649 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms