RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 ABCC5O15440 1437 aa16.86■□□□□ 0.29
VPS45-211ENST00000535106 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
VPS45-211ENST00000535106 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
VPS45-211ENST00000535106 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
VPS45-211ENST00000535106 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
VPS45-211ENST00000535106 ROCK1Q13464 1354 aa16.83■□□□□ 0.28
VPS45-211ENST00000535106 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
VPS45-211ENST00000535106 NEFLP07196 543 aa16.82■□□□□ 0.28
VPS45-211ENST00000535106 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS45-211ENST00000535106 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
VPS45-211ENST00000535106 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
VPS45-211ENST00000535106 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
VPS45-211ENST00000535106 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
VPS45-211ENST00000535106 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
VPS45-211ENST00000535106 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
VPS45-211ENST00000535106 RPRD2Q5VT52 1461 aaKnown RBP16.78■□□□□ 0.28
VPS45-211ENST00000535106 PRKCSHP14314 528 aaPredicted RBP16.77■□□□□ 0.27
VPS45-211ENST00000535106 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.27
VPS45-211ENST00000535106 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
VPS45-211ENST00000535106 NCOA1Q15788 1441 aa16.76■□□□□ 0.27
VPS45-211ENST00000535106 CNTLNQ9NXG0 1405 aa16.76■□□□□ 0.27
VPS45-211ENST00000535106 CCDC7Q96M83 1385 aa16.76■□□□□ 0.27
VPS45-211ENST00000535106 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
VPS45-211ENST00000535106 PLB1Q6P1J6 1458 aa16.74■□□□□ 0.27
VPS45-211ENST00000535106 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
VPS45-211ENST00000535106 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
VPS45-211ENST00000535106 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
VPS45-211ENST00000535106 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
VPS45-211ENST00000535106 PZPP20742 1482 aa16.72■□□□□ 0.27
VPS45-211ENST00000535106 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
VPS45-211ENST00000535106 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
VPS45-211ENST00000535106 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
VPS45-211ENST00000535106 FBLN2P98095 1184 aa16.71■□□□□ 0.27
VPS45-211ENST00000535106 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
VPS45-211ENST00000535106 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
VPS45-211ENST00000535106 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
VPS45-211ENST00000535106 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
VPS45-211ENST00000535106 KIF14Q15058 1648 aa16.68■□□□□ 0.26
VPS45-211ENST00000535106 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
VPS45-211ENST00000535106 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
VPS45-211ENST00000535106 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
VPS45-211ENST00000535106 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
VPS45-211ENST00000535106 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
VPS45-211ENST00000535106 MRS2Q9HD23 443 aa16.64■□□□□ 0.26
VPS45-211ENST00000535106 PKD2Q13563 968 aa16.64■□□□□ 0.25
VPS45-211ENST00000535106 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
VPS45-211ENST00000535106 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
VPS45-211ENST00000535106 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
VPS45-211ENST00000535106 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
VPS45-211ENST00000535106 MSH5O43196 834 aa16.61■□□□□ 0.25
VPS45-211ENST00000535106 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
VPS45-211ENST00000535106 ITSN2Q9NZM3 1697 aa16.61■□□□□ 0.25
VPS45-211ENST00000535106 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
VPS45-211ENST00000535106 NUP160Q12769 1436 aa16.6■□□□□ 0.25
VPS45-211ENST00000535106 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
VPS45-211ENST00000535106 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
VPS45-211ENST00000535106 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
VPS45-211ENST00000535106 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
VPS45-211ENST00000535106 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
VPS45-211ENST00000535106 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
VPS45-211ENST00000535106 CROCC2H7BZ55 1655 aa16.57■□□□□ 0.24
VPS45-211ENST00000535106 USP47Q96K76 1375 aa16.57■□□□□ 0.24
VPS45-211ENST00000535106 ATP10BO94823 1461 aa16.56■□□□□ 0.24
VPS45-211ENST00000535106 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
VPS45-211ENST00000535106 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
VPS45-211ENST00000535106 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
VPS45-211ENST00000535106 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
VPS45-211ENST00000535106 NUP155O75694 1391 aa16.55■□□□□ 0.24
VPS45-211ENST00000535106 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
VPS45-211ENST00000535106 POLR1AO95602 1720 aaPredicted RBP16.54■□□□□ 0.24
VPS45-211ENST00000535106 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
VPS45-211ENST00000535106 ABCA8O94911 1581 aa16.53■□□□□ 0.24
VPS45-211ENST00000535106 CDC42BPAQ5VT25 1732 aa16.53■□□□□ 0.24
VPS45-211ENST00000535106 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
VPS45-211ENST00000535106 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
VPS45-211ENST00000535106 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
VPS45-211ENST00000535106 KDM5CP41229 1560 aa16.49■□□□□ 0.23
VPS45-211ENST00000535106 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
VPS45-211ENST00000535106 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
VPS45-211ENST00000535106 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
VPS45-211ENST00000535106 UHRF1BP1Q6BDS2 1440 aa16.48■□□□□ 0.23
VPS45-211ENST00000535106 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
VPS45-211ENST00000535106 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
VPS45-211ENST00000535106 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
VPS45-211ENST00000535106 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
VPS45-211ENST00000535106 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
VPS45-211ENST00000535106 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
VPS45-211ENST00000535106 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
VPS45-211ENST00000535106 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
VPS45-211ENST00000535106 ARID4BQ4LE39 1312 aaPredicted RBP16.44■□□□□ 0.22
VPS45-211ENST00000535106 KDM5DQ9BY66 1539 aa16.43■□□□□ 0.22
VPS45-211ENST00000535106 PTPRGP23470 1445 aa16.43■□□□□ 0.22
VPS45-211ENST00000535106 ARHGEF12Q9NZN5 1544 aa16.41■□□□□ 0.22
VPS45-211ENST00000535106 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
VPS45-211ENST00000535106 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
VPS45-211ENST00000535106 ARHGEF5Q12774 1597 aa16.39■□□□□ 0.21
VPS45-211ENST00000535106 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
VPS45-211ENST00000535106 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
VPS45-211ENST00000535106 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
VPS45-211ENST00000535106 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms