RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.18
UPK2-202ENST00000534788 PLCH2O75038 1416 aa22.39■■□□□ 1.17
UPK2-202ENST00000534788 SCAPERQ9BY12 1400 aa22.39■■□□□ 1.17
UPK2-202ENST00000534788 MYO5CQ9NQX4 1742 aa22.38■■□□□ 1.17
UPK2-202ENST00000534788 MLECQ14165 292 aa22.38■■□□□ 1.17
UPK2-202ENST00000534788 CERKQ8TCT0 537 aa22.37■■□□□ 1.17
UPK2-202ENST00000534788 ATP10AO60312 1499 aa22.34■■□□□ 1.17
UPK2-202ENST00000534788 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
UPK2-202ENST00000534788 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
UPK2-202ENST00000534788 KIF14Q15058 1648 aa22.3■■□□□ 1.16
UPK2-202ENST00000534788 KDM5CP41229 1560 aa22.27■■□□□ 1.16
UPK2-202ENST00000534788 CEBPAP49715 358 aaPredicted RBP22.25■■□□□ 1.15
UPK2-202ENST00000534788 ZNF518AQ6AHZ1 1483 aa22.25■■□□□ 1.15
UPK2-202ENST00000534788 LRRIQ1Q96JM4 1722 aa22.24■■□□□ 1.15
UPK2-202ENST00000534788 EFCAB2Q5VUJ9 269 aa22.24■■□□□ 1.15
UPK2-202ENST00000534788 DIP2CQ9Y2E4 1556 aa22.23■■□□□ 1.15
UPK2-202ENST00000534788 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
UPK2-202ENST00000534788 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
UPK2-202ENST00000534788 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
UPK2-202ENST00000534788 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
UPK2-202ENST00000534788 C3P01024 1663 aa22.2■■□□□ 1.15
UPK2-202ENST00000534788 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
UPK2-202ENST00000534788 ABCA6Q8N139 1617 aa22.2■■□□□ 1.14
UPK2-202ENST00000534788 CDC42BPBQ9Y5S2 1711 aa22.2■■□□□ 1.14
UPK2-202ENST00000534788 UHRF1BP1Q6BDS2 1440 aa22.19■■□□□ 1.14
UPK2-202ENST00000534788 SETD1BQ9UPS6 1966 aaKnown RBP22.19■■□□□ 1.14
UPK2-202ENST00000534788 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
UPK2-202ENST00000534788 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
UPK2-202ENST00000534788 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
UPK2-202ENST00000534788 CDK11AQ9UQ88 783 aaPredicted RBP22.15■■□□□ 1.14
UPK2-202ENST00000534788 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
UPK2-202ENST00000534788 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
UPK2-202ENST00000534788 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
UPK2-202ENST00000534788 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
UPK2-202ENST00000534788 ILDR2Q71H61 639 aa22.12■■□□□ 1.13
UPK2-202ENST00000534788 CLIP1P30622 1438 aa22.12■■□□□ 1.13
UPK2-202ENST00000534788 DISP3Q9P2K9 1392 aa22.12■■□□□ 1.13
UPK2-202ENST00000534788 ABCC1P33527 1531 aa22.11■■□□□ 1.13
UPK2-202ENST00000534788 AGLP35573 1532 aa22.11■■□□□ 1.13
UPK2-202ENST00000534788 PTPRTO14522 1441 aa22.1■■□□□ 1.13
UPK2-202ENST00000534788 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
UPK2-202ENST00000534788 KIDINS220Q9ULH0 1771 aa22.08■■□□□ 1.13
UPK2-202ENST00000534788 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
UPK2-202ENST00000534788 MYT1LQ9UL68 1186 aa22.08■■□□□ 1.13
UPK2-202ENST00000534788 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
UPK2-202ENST00000534788 LTBP4Q8N2S1 1624 aa22.07■■□□□ 1.12
UPK2-202ENST00000534788 SPATA31D1Q6ZQQ2 1576 aa22.06■■□□□ 1.12
UPK2-202ENST00000534788 CDC42BPAQ5VT25 1732 aa22.06■■□□□ 1.12
UPK2-202ENST00000534788 SOCS7O14512 581 aa22.02■■□□□ 1.12
UPK2-202ENST00000534788 MROH2AA6NES4 1674 aa22.01■■□□□ 1.11
UPK2-202ENST00000534788 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
UPK2-202ENST00000534788 IQSEC2Q5JU85 1478 aa22■■□□□ 1.11
UPK2-202ENST00000534788 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
UPK2-202ENST00000534788 CCDC18Q5T9S5 1454 aa21.98■■□□□ 1.11
UPK2-202ENST00000534788 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
UPK2-202ENST00000534788 SAMD9LQ8IVG5 1584 aa21.97■■□□□ 1.11
UPK2-202ENST00000534788 CAMSAP1Q5T5Y3 1602 aa21.97■■□□□ 1.11
UPK2-202ENST00000534788 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
UPK2-202ENST00000534788 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
UPK2-202ENST00000534788 NPATQ14207 1427 aa21.94■■□□□ 1.1
UPK2-202ENST00000534788 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
UPK2-202ENST00000534788 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
UPK2-202ENST00000534788 SYCP2Q9BX26 1530 aa21.91■■□□□ 1.1
UPK2-202ENST00000534788 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
UPK2-202ENST00000534788 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
UPK2-202ENST00000534788 PLXNC1O60486 1568 aa21.88■■□□□ 1.09
UPK2-202ENST00000534788 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
UPK2-202ENST00000534788 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
UPK2-202ENST00000534788 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
UPK2-202ENST00000534788 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
UPK2-202ENST00000534788 CEP170BQ9Y4F5 1589 aaPredicted RBP21.84■■□□□ 1.09
UPK2-202ENST00000534788 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
UPK2-202ENST00000534788 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
UPK2-202ENST00000534788 ZNF777Q9ULD5 760 aaPredicted RBP21.83■■□□□ 1.09
UPK2-202ENST00000534788 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
UPK2-202ENST00000534788 ZNF335Q9H4Z2 1342 aaPredicted RBP21.82■■□□□ 1.08
UPK2-202ENST00000534788 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
UPK2-202ENST00000534788 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
UPK2-202ENST00000534788 A2MP01023 1474 aa21.8■■□□□ 1.08
UPK2-202ENST00000534788 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
UPK2-202ENST00000534788 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
UPK2-202ENST00000534788 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
UPK2-202ENST00000534788 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.07
UPK2-202ENST00000534788 PKD2Q13563 968 aa21.76■■□□□ 1.07
UPK2-202ENST00000534788 UBAP1LF5GYI3 381 aa21.75■■□□□ 1.07
UPK2-202ENST00000534788 DNMT1P26358 1616 aaKnown RBP21.73■■□□□ 1.07
UPK2-202ENST00000534788 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
UPK2-202ENST00000534788 GGT6Q6P531 493 aa21.71■■□□□ 1.07
UPK2-202ENST00000534788 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
UPK2-202ENST00000534788 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
UPK2-202ENST00000534788 A2ML1A8K2U0 1454 aa21.69■■□□□ 1.06
UPK2-202ENST00000534788 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
UPK2-202ENST00000534788 TIAM1Q13009 1591 aa21.68■■□□□ 1.06
UPK2-202ENST00000534788 NEURL4Q96JN8 1562 aa21.67■■□□□ 1.06
UPK2-202ENST00000534788 MBD5Q9P267 1494 aa21.64■■□□□ 1.06
UPK2-202ENST00000534788 MED1Q15648 1581 aaPredicted RBP21.63■■□□□ 1.05
UPK2-202ENST00000534788 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
UPK2-202ENST00000534788 ZNF644Q9H582 1327 aaPredicted RBP21.62■■□□□ 1.05
UPK2-202ENST00000534788 CPS1P31327 1500 aa21.61■■□□□ 1.05
UPK2-202ENST00000534788 RTEL1-TNFRSF6BF6WH68 1400 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms