RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 FGD6Q6ZV73 1430 aa9.78□□□□□ -0.84
NPIPA1-204ENST00000534720 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
NPIPA1-204ENST00000534720 ADCY10Q96PN6 1610 aa9.78□□□□□ -0.84
NPIPA1-204ENST00000534720 MYOM3Q5VTT5 1437 aa9.78□□□□□ -0.84
NPIPA1-204ENST00000534720 PTPN23Q9H3S7 1636 aa9.77□□□□□ -0.85
NPIPA1-204ENST00000534720 POLA2Q14181 598 aa9.76□□□□□ -0.85
NPIPA1-204ENST00000534720 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
NPIPA1-204ENST00000534720 PTPRGP23470 1445 aa9.75□□□□□ -0.85
NPIPA1-204ENST00000534720 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
NPIPA1-204ENST00000534720 ITSN2Q9NZM3 1697 aa9.75□□□□□ -0.85
NPIPA1-204ENST00000534720 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
NPIPA1-204ENST00000534720 TROQ12816 1431 aaPredicted RBP9.74□□□□□ -0.85
NPIPA1-204ENST00000534720 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
NPIPA1-204ENST00000534720 MIA2Q96PC5 1412 aa9.73□□□□□ -0.85
NPIPA1-204ENST00000534720 ATP10BO94823 1461 aa9.73□□□□□ -0.85
NPIPA1-204ENST00000534720 ARID3CA6NKF2 412 aa9.72□□□□□ -0.85
NPIPA1-204ENST00000534720 UACAQ9BZF9 1416 aa9.71□□□□□ -0.85
NPIPA1-204ENST00000534720 KIF14Q15058 1648 aa9.71□□□□□ -0.85
NPIPA1-204ENST00000534720 ITGAEP38570 1179 aa9.71□□□□□ -0.86
NPIPA1-204ENST00000534720 ABCC2Q92887 1545 aa9.71□□□□□ -0.86
NPIPA1-204ENST00000534720 ABCB7O75027 752 aa9.7□□□□□ -0.86
NPIPA1-204ENST00000534720 DSG3P32926 999 aa9.7□□□□□ -0.86
NPIPA1-204ENST00000534720 CDC42BPAQ5VT25 1732 aa9.7□□□□□ -0.86
NPIPA1-204ENST00000534720 SETD5Q9C0A6 1442 aa9.7□□□□□ -0.86
NPIPA1-204ENST00000534720 GCC2Q8IWJ2 1684 aa9.68□□□□□ -0.86
NPIPA1-204ENST00000534720 UHRF1BP1LA0JNW5 1464 aa9.68□□□□□ -0.86
NPIPA1-204ENST00000534720 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 RAB3GAP2Q9H2M9 1393 aa9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 PLEKHD1A6NEE1 506 aa9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 ZCCHC11Q5TAX3 1644 aaKnown RBP9.67□□□□□ -0.86
NPIPA1-204ENST00000534720 FKBP8Q14318 412 aa9.66□□□□□ -0.86
NPIPA1-204ENST00000534720 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
NPIPA1-204ENST00000534720 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
NPIPA1-204ENST00000534720 GPATCH8Q9UKJ3 1502 aaKnown RBP9.66□□□□□ -0.86
NPIPA1-204ENST00000534720 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-204ENST00000534720 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-204ENST00000534720 CROCC2H7BZ55 1655 aa9.65□□□□□ -0.86
NPIPA1-204ENST00000534720 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 KDM5BQ9UGL1 1544 aa9.64□□□□□ -0.87
NPIPA1-204ENST00000534720 PREX2Q70Z35 1606 aa9.63□□□□□ -0.87
NPIPA1-204ENST00000534720 CAMSAP2Q08AD1 1489 aa9.63□□□□□ -0.87
NPIPA1-204ENST00000534720 MYO5CQ9NQX4 1742 aa9.63□□□□□ -0.87
NPIPA1-204ENST00000534720 DAPK1P53355 1430 aa9.62□□□□□ -0.87
NPIPA1-204ENST00000534720 NAIPQ13075 1403 aa9.62□□□□□ -0.87
NPIPA1-204ENST00000534720 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
NPIPA1-204ENST00000534720 ZBTB12Q9Y330 459 aaPredicted RBP9.61□□□□□ -0.87
NPIPA1-204ENST00000534720 CFDP1Q9UEE9 299 aaPredicted RBP9.6□□□□□ -0.87
NPIPA1-204ENST00000534720 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
NPIPA1-204ENST00000534720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.6□□□□□ -0.87
NPIPA1-204ENST00000534720 ABCC5O15440 1437 aa9.59□□□□□ -0.87
NPIPA1-204ENST00000534720 ROCK1Q13464 1354 aa9.59□□□□□ -0.87
NPIPA1-204ENST00000534720 MAPKBP1O60336 1514 aa9.59□□□□□ -0.87
NPIPA1-204ENST00000534720 ARHGEF5Q12774 1597 aa9.58□□□□□ -0.88
NPIPA1-204ENST00000534720 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
NPIPA1-204ENST00000534720 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
NPIPA1-204ENST00000534720 KDM6BO15054 1643 aa9.56□□□□□ -0.88
NPIPA1-204ENST00000534720 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
NPIPA1-204ENST00000534720 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
NPIPA1-204ENST00000534720 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
NPIPA1-204ENST00000534720 SHANK2Q9UPX8 1470 aa9.56□□□□□ -0.88
NPIPA1-204ENST00000534720 RRP7BPQ9NSQ0 103 aa9.54□□□□□ -0.88
NPIPA1-204ENST00000534720 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
NPIPA1-204ENST00000534720 ARHGAP5Q13017 1502 aa9.54□□□□□ -0.88
NPIPA1-204ENST00000534720 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
NPIPA1-204ENST00000534720 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
NPIPA1-204ENST00000534720 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
NPIPA1-204ENST00000534720 NCOA1Q15788 1441 aa9.52□□□□□ -0.88
NPIPA1-204ENST00000534720 MAST1Q9Y2H9 1570 aa9.52□□□□□ -0.89
NPIPA1-204ENST00000534720 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
NPIPA1-204ENST00000534720 MBD5Q9P267 1494 aa9.52□□□□□ -0.89
NPIPA1-204ENST00000534720 PLCH2O75038 1416 aa9.52□□□□□ -0.89
NPIPA1-204ENST00000534720 RSPH4AQ5TD94 716 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 CCDC141Q6ZP82 1450 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 ANKRD30AQ9BXX3 1397 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 C9orf84Q5VXU9 1444 aa9.51□□□□□ -0.89
NPIPA1-204ENST00000534720 SPDYE4A6NLX3 237 aa9.5□□□□□ -0.89
NPIPA1-204ENST00000534720 KIAA1107Q9UPP5 1409 aa9.5□□□□□ -0.89
NPIPA1-204ENST00000534720 ASXL2Q76L83 1435 aa9.49□□□□□ -0.89
NPIPA1-204ENST00000534720 ABCC1P33527 1531 aa9.49□□□□□ -0.89
NPIPA1-204ENST00000534720 TSPY4P0CV99 314 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 TSPY10P0CW01 314 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 RIMBP3CA6NJZ7 1639 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 RIMBP3BA6NNM3 1639 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 RIMBP3Q9UFD9 1639 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 PLXNC1O60486 1568 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
NPIPA1-204ENST00000534720 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
NPIPA1-204ENST00000534720 EFCAB2Q5VUJ9 269 aa9.47□□□□□ -0.89
NPIPA1-204ENST00000534720 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
NPIPA1-204ENST00000534720 TRIM52Q96A61 297 aa9.46□□□□□ -0.89
NPIPA1-204ENST00000534720 ARHGEF12Q9NZN5 1544 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms