RNA–Protein interactions for RNA: ENST00000534657.5

LMO7-226, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-226ENST00000534657 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
LMO7-226ENST00000534657 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
LMO7-226ENST00000534657 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
LMO7-226ENST00000534657 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
LMO7-226ENST00000534657 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
LMO7-226ENST00000534657 ABCA8O94911 1581 aa13.17□□□□□ -0.3
LMO7-226ENST00000534657 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
LMO7-226ENST00000534657 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
LMO7-226ENST00000534657 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
LMO7-226ENST00000534657 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
LMO7-226ENST00000534657 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
LMO7-226ENST00000534657 FBLN2P98095 1184 aa13.12□□□□□ -0.31
LMO7-226ENST00000534657 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
LMO7-226ENST00000534657 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
LMO7-226ENST00000534657 CHD1O14646 1710 aa13.12□□□□□ -0.31
LMO7-226ENST00000534657 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
LMO7-226ENST00000534657 NAIPQ13075 1403 aa13.1□□□□□ -0.31
LMO7-226ENST00000534657 FAM50AQ14320 339 aaKnown RBP13.09□□□□□ -0.31
LMO7-226ENST00000534657 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
LMO7-226ENST00000534657 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
LMO7-226ENST00000534657 PLB1Q6P1J6 1458 aa13.09□□□□□ -0.31
LMO7-226ENST00000534657 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.31
LMO7-226ENST00000534657 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
LMO7-226ENST00000534657 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
LMO7-226ENST00000534657 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
LMO7-226ENST00000534657 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
LMO7-226ENST00000534657 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
LMO7-226ENST00000534657 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
LMO7-226ENST00000534657 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
LMO7-226ENST00000534657 CDK11AQ9UQ88 783 aaPredicted RBP13.06□□□□□ -0.32
LMO7-226ENST00000534657 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
LMO7-226ENST00000534657 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
LMO7-226ENST00000534657 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
LMO7-226ENST00000534657 ATP10BO94823 1461 aa13.03□□□□□ -0.32
LMO7-226ENST00000534657 ITGAEP38570 1179 aa13.02□□□□□ -0.33
LMO7-226ENST00000534657 GPATCH8Q9UKJ3 1502 aaKnown RBP13.02□□□□□ -0.33
LMO7-226ENST00000534657 DAPK1P53355 1430 aa13.01□□□□□ -0.33
LMO7-226ENST00000534657 KIF14Q15058 1648 aa13.01□□□□□ -0.33
LMO7-226ENST00000534657 ADGRL2O95490 1459 aa13□□□□□ -0.33
LMO7-226ENST00000534657 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
LMO7-226ENST00000534657 ABCC5O15440 1437 aa12.99□□□□□ -0.33
LMO7-226ENST00000534657 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
LMO7-226ENST00000534657 PTPRGP23470 1445 aa12.98□□□□□ -0.33
LMO7-226ENST00000534657 ADGBQ8N7X0 1667 aa12.98□□□□□ -0.33
LMO7-226ENST00000534657 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
LMO7-226ENST00000534657 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
LMO7-226ENST00000534657 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
LMO7-226ENST00000534657 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
LMO7-226ENST00000534657 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
LMO7-226ENST00000534657 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
LMO7-226ENST00000534657 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
LMO7-226ENST00000534657 KDM6BO15054 1643 aa12.93□□□□□ -0.34
LMO7-226ENST00000534657 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
LMO7-226ENST00000534657 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
LMO7-226ENST00000534657 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
LMO7-226ENST00000534657 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
LMO7-226ENST00000534657 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
LMO7-226ENST00000534657 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
LMO7-226ENST00000534657 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
LMO7-226ENST00000534657 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
LMO7-226ENST00000534657 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
LMO7-226ENST00000534657 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
LMO7-226ENST00000534657 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
LMO7-226ENST00000534657 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
LMO7-226ENST00000534657 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
LMO7-226ENST00000534657 MBD5Q9P267 1494 aa12.86□□□□□ -0.35
LMO7-226ENST00000534657 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
LMO7-226ENST00000534657 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
LMO7-226ENST00000534657 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
LMO7-226ENST00000534657 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
LMO7-226ENST00000534657 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
LMO7-226ENST00000534657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
LMO7-226ENST00000534657 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
LMO7-226ENST00000534657 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
LMO7-226ENST00000534657 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
LMO7-226ENST00000534657 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
LMO7-226ENST00000534657 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
LMO7-226ENST00000534657 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
LMO7-226ENST00000534657 PZPP20742 1482 aa12.83□□□□□ -0.36
LMO7-226ENST00000534657 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
LMO7-226ENST00000534657 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
LMO7-226ENST00000534657 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
LMO7-226ENST00000534657 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
LMO7-226ENST00000534657 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
LMO7-226ENST00000534657 CCDC141Q6ZP82 1450 aa12.81□□□□□ -0.36
LMO7-226ENST00000534657 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
LMO7-226ENST00000534657 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
LMO7-226ENST00000534657 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
LMO7-226ENST00000534657 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
LMO7-226ENST00000534657 PLXNC1O60486 1568 aa12.79□□□□□ -0.36
LMO7-226ENST00000534657 MPHOSPH9Q99550 1183 aa12.79□□□□□ -0.36
LMO7-226ENST00000534657 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
LMO7-226ENST00000534657 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
LMO7-226ENST00000534657 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.37
LMO7-226ENST00000534657 PLCH2O75038 1416 aa12.76□□□□□ -0.37
LMO7-226ENST00000534657 UNC13BO14795 1591 aa12.74□□□□□ -0.37
LMO7-226ENST00000534657 ABCC1P33527 1531 aa12.74□□□□□ -0.37
LMO7-226ENST00000534657 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
LMO7-226ENST00000534657 SYCP2Q9BX26 1530 aa12.73□□□□□ -0.37
LMO7-226ENST00000534657 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms