RNA–Protein interactions for RNA: ENST00000534596.5

MS4A6A-221, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-221ENST00000534596 HMGXB3Q12766 1538 aa9.71□□□□□ -0.86
MS4A6A-221ENST00000534596 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
MS4A6A-221ENST00000534596 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
MS4A6A-221ENST00000534596 WIZO95785 1651 aa9.7□□□□□ -0.86
MS4A6A-221ENST00000534596 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
MS4A6A-221ENST00000534596 G3V3G9 751 aa9.68□□□□□ -0.86
MS4A6A-221ENST00000534596 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
MS4A6A-221ENST00000534596 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
MS4A6A-221ENST00000534596 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
MS4A6A-221ENST00000534596 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
MS4A6A-221ENST00000534596 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
MS4A6A-221ENST00000534596 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
MS4A6A-221ENST00000534596 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
MS4A6A-221ENST00000534596 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
MS4A6A-221ENST00000534596 ERBB3P21860 1342 aa9.56□□□□□ -0.88
MS4A6A-221ENST00000534596 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
MS4A6A-221ENST00000534596 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
MS4A6A-221ENST00000534596 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
MS4A6A-221ENST00000534596 TMEM92Q6UXU6 159 aa9.51□□□□□ -0.89
MS4A6A-221ENST00000534596 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
MS4A6A-221ENST00000534596 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
MS4A6A-221ENST00000534596 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
MS4A6A-221ENST00000534596 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
MS4A6A-221ENST00000534596 ZSWIM6Q9HCJ5 1215 aa9.49□□□□□ -0.89
MS4A6A-221ENST00000534596 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
MS4A6A-221ENST00000534596 SOX12O15370 315 aa9.46□□□□□ -0.9
MS4A6A-221ENST00000534596 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
MS4A6A-221ENST00000534596 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
MS4A6A-221ENST00000534596 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
MS4A6A-221ENST00000534596 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
MS4A6A-221ENST00000534596 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
MS4A6A-221ENST00000534596 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
MS4A6A-221ENST00000534596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.42□□□□□ -0.9
MS4A6A-221ENST00000534596 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
MS4A6A-221ENST00000534596 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
MS4A6A-221ENST00000534596 CFTRP13569 1480 aa9.41□□□□□ -0.9
MS4A6A-221ENST00000534596 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
MS4A6A-221ENST00000534596 PRDM2Q13029 1718 aa9.41□□□□□ -0.9
MS4A6A-221ENST00000534596 NESP48681 1621 aa9.41□□□□□ -0.9
MS4A6A-221ENST00000534596 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
MS4A6A-221ENST00000534596 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
MS4A6A-221ENST00000534596 PTGER2P43116 358 aa9.38□□□□□ -0.91
MS4A6A-221ENST00000534596 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
MS4A6A-221ENST00000534596 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
MS4A6A-221ENST00000534596 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
MS4A6A-221ENST00000534596 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
MS4A6A-221ENST00000534596 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
MS4A6A-221ENST00000534596 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
MS4A6A-221ENST00000534596 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
MS4A6A-221ENST00000534596 NLRP6P59044 892 aa9.32□□□□□ -0.92
MS4A6A-221ENST00000534596 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
MS4A6A-221ENST00000534596 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
MS4A6A-221ENST00000534596 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
MS4A6A-221ENST00000534596 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
MS4A6A-221ENST00000534596 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
MS4A6A-221ENST00000534596 THOC2Q8NI27 1593 aaKnown RBP9.26□□□□□ -0.93
MS4A6A-221ENST00000534596 KIF3CO14782 793 aa9.26□□□□□ -0.93
MS4A6A-221ENST00000534596 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
MS4A6A-221ENST00000534596 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
MS4A6A-221ENST00000534596 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
MS4A6A-221ENST00000534596 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
MS4A6A-221ENST00000534596 WDR62O43379 1518 aa9.23□□□□□ -0.93
MS4A6A-221ENST00000534596 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
MS4A6A-221ENST00000534596 NUDT7P0C024 238 aa9.23□□□□□ -0.93
MS4A6A-221ENST00000534596 PBX2P40425 430 aa9.23□□□□□ -0.93
MS4A6A-221ENST00000534596 DNMBPQ6XZF7 1577 aa9.23□□□□□ -0.93
MS4A6A-221ENST00000534596 CUX2O14529 1486 aa9.21□□□□□ -0.93
MS4A6A-221ENST00000534596 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.93
MS4A6A-221ENST00000534596 SLC34A2O95436 690 aa9.2□□□□□ -0.94
MS4A6A-221ENST00000534596 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
MS4A6A-221ENST00000534596 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
MS4A6A-221ENST00000534596 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
MS4A6A-221ENST00000534596 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
MS4A6A-221ENST00000534596 CUX1P39880 1505 aa9.18□□□□□ -0.94
MS4A6A-221ENST00000534596 PCDHGA4Q9Y5G9 962 aa9.18□□□□□ -0.94
MS4A6A-221ENST00000534596 TOP2BQ02880 1626 aa9.17□□□□□ -0.94
MS4A6A-221ENST00000534596 BIVM-ERCC5R4GMW8 1640 aa9.17□□□□□ -0.94
MS4A6A-221ENST00000534596 STK25O00506 426 aa9.17□□□□□ -0.94
MS4A6A-221ENST00000534596 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
MS4A6A-221ENST00000534596 SYNJ1O43426 1573 aa9.15□□□□□ -0.95
MS4A6A-221ENST00000534596 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
MS4A6A-221ENST00000534596 FGD5Q6ZNL6 1462 aa9.14□□□□□ -0.95
MS4A6A-221ENST00000534596 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
MS4A6A-221ENST00000534596 IFT140Q96RY7 1462 aa9.13□□□□□ -0.95
MS4A6A-221ENST00000534596 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
MS4A6A-221ENST00000534596 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
MS4A6A-221ENST00000534596 ADGRD1Q6QNK2 874 aa9.11□□□□□ -0.95
MS4A6A-221ENST00000534596 SOGA1O94964 1423 aa9.11□□□□□ -0.95
MS4A6A-221ENST00000534596 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
MS4A6A-221ENST00000534596 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
MS4A6A-221ENST00000534596 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
MS4A6A-221ENST00000534596 TARBP1Q13395 1621 aaKnown RBP9.09□□□□□ -0.95
MS4A6A-221ENST00000534596 WDR97A6NE52 1622 aa9.08□□□□□ -0.96
MS4A6A-221ENST00000534596 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
MS4A6A-221ENST00000534596 RAD54L2Q9Y4B4 1467 aa9.07□□□□□ -0.96
MS4A6A-221ENST00000534596 ABCA10Q8WWZ4 1543 aa9.06□□□□□ -0.96
MS4A6A-221ENST00000534596 TK2O00142 265 aa9.05□□□□□ -0.96
MS4A6A-221ENST00000534596 PPP1R37O75864 691 aa9.05□□□□□ -0.96
MS4A6A-221ENST00000534596 PTCD2Q8WV60 388 aaKnown RBP9.05□□□□□ -0.96
MS4A6A-221ENST00000534596 RGL2O15211 777 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms