RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CCER2I3L3R5 266 aa26.43■■□□□ 1.82
SMPD1-210ENST00000534405 NOP58Q9Y2X3 529 aaKnown RBP26.43■■□□□ 1.82
SMPD1-210ENST00000534405 DISP1Q96F81 1524 aa26.42■■□□□ 1.82
SMPD1-210ENST00000534405 AKNAQ7Z591 1439 aa26.42■■□□□ 1.82
SMPD1-210ENST00000534405 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
SMPD1-210ENST00000534405 KIAA0586Q9BVV6 1533 aa26.4■■□□□ 1.82
SMPD1-210ENST00000534405 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
SMPD1-210ENST00000534405 NBR1Q14596 966 aa26.37■■□□□ 1.81
SMPD1-210ENST00000534405 ANP32CO43423 234 aa26.35■■□□□ 1.81
SMPD1-210ENST00000534405 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
SMPD1-210ENST00000534405 IL27Q8NEV9 243 aa26.34■■□□□ 1.81
SMPD1-210ENST00000534405 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
SMPD1-210ENST00000534405 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
SMPD1-210ENST00000534405 MPHOSPH9Q99550 1183 aa26.31■■□□□ 1.8
SMPD1-210ENST00000534405 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
SMPD1-210ENST00000534405 DAPK1P53355 1430 aa26.3■■□□□ 1.8
SMPD1-210ENST00000534405 RAPGEF6Q8TEU7 1601 aa26.29■■□□□ 1.8
SMPD1-210ENST00000534405 FOXD1Q16676 465 aa26.29■■□□□ 1.8
SMPD1-210ENST00000534405 ABCC5O15440 1437 aa26.27■■□□□ 1.8
SMPD1-210ENST00000534405 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.26■■□□□ 1.79
SMPD1-210ENST00000534405 PAK3O75914 559 aaPredicted RBP26.26■■□□□ 1.79
SMPD1-210ENST00000534405 DNMT1P26358 1616 aaKnown RBP26.25■■□□□ 1.79
SMPD1-210ENST00000534405 ROCK1Q13464 1354 aa26.23■■□□□ 1.79
SMPD1-210ENST00000534405 HSPA5P11021 654 aaKnown RBP26.23■■□□□ 1.79
SMPD1-210ENST00000534405 RTL5Q5HYW3 569 aaPredicted RBP26.22■■□□□ 1.79
SMPD1-210ENST00000534405 PPP4R2Q9NY27 417 aa26.22■■□□□ 1.79
SMPD1-210ENST00000534405 L3MBTL2Q969R5 705 aa26.2■■□□□ 1.79
SMPD1-210ENST00000534405 WASHC2AQ641Q2 1341 aa26.2■■□□□ 1.78
SMPD1-210ENST00000534405 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
SMPD1-210ENST00000534405 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
SMPD1-210ENST00000534405 RTN4Q9NQC3 1192 aaKnown RBP26.17■■□□□ 1.78
SMPD1-210ENST00000534405 ANKRD30BQ9BXX2 1392 aa26.17■■□□□ 1.78
SMPD1-210ENST00000534405 PLB1Q6P1J6 1458 aa26.16■■□□□ 1.78
SMPD1-210ENST00000534405 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-210ENST00000534405 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
SMPD1-210ENST00000534405 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.77
SMPD1-210ENST00000534405 IRX6P78412 446 aaPredicted RBP26.14■■□□□ 1.77
SMPD1-210ENST00000534405 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.77
SMPD1-210ENST00000534405 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
SMPD1-210ENST00000534405 EIF4G2P78344 907 aaKnown RBP eCLIP26.12■■□□□ 1.77
SMPD1-210ENST00000534405 RPRD2Q5VT52 1461 aaKnown RBP26.11■■□□□ 1.77
SMPD1-210ENST00000534405 CAMSAP2Q08AD1 1489 aa26.1■■□□□ 1.77
SMPD1-210ENST00000534405 FBLN2P98095 1184 aa26.09■■□□□ 1.77
SMPD1-210ENST00000534405 KIF14Q15058 1648 aa26.09■■□□□ 1.77
SMPD1-210ENST00000534405 TEX14Q8IWB6 1497 aa26.09■■□□□ 1.77
SMPD1-210ENST00000534405 NBPF8Q3BBV2 869 aa26.08■■□□□ 1.77
SMPD1-210ENST00000534405 GPATCH8Q9UKJ3 1502 aaKnown RBP26.08■■□□□ 1.76
SMPD1-210ENST00000534405 C11orf95C9JLR9 678 aaPredicted RBP26.07■■□□□ 1.76
SMPD1-210ENST00000534405 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
SMPD1-210ENST00000534405 CFDP1Q9UEE9 299 aaPredicted RBP26.07■■□□□ 1.76
SMPD1-210ENST00000534405 IPO9Q96P70 1041 aaKnown RBP26.05■■□□□ 1.76
SMPD1-210ENST00000534405 PZPP20742 1482 aa26.04■■□□□ 1.76
SMPD1-210ENST00000534405 ITSN2Q9NZM3 1697 aa26.03■■□□□ 1.76
SMPD1-210ENST00000534405 NUP160Q12769 1436 aa26.03■■□□□ 1.76
SMPD1-210ENST00000534405 NCOA1Q15788 1441 aa26.03■■□□□ 1.76
SMPD1-210ENST00000534405 JPH4Q96JJ6 628 aa26.03■■□□□ 1.76
SMPD1-210ENST00000534405 ADCY10Q96PN6 1610 aa26.02■■□□□ 1.76
SMPD1-210ENST00000534405 ZNF777Q9ULD5 760 aaPredicted RBP26.01■■□□□ 1.75
SMPD1-210ENST00000534405 CNTLNQ9NXG0 1405 aa26■■□□□ 1.75
SMPD1-210ENST00000534405 CARMIL2Q6F5E8 1435 aa25.99■■□□□ 1.75
SMPD1-210ENST00000534405 CCDC7Q96M83 1385 aa25.98■■□□□ 1.75
SMPD1-210ENST00000534405 ADGBQ8N7X0 1667 aa25.98■■□□□ 1.75
SMPD1-210ENST00000534405 PKNOX2Q96KN3 472 aa25.97■■□□□ 1.75
SMPD1-210ENST00000534405 ANP32AP39687 249 aaKnown RBP25.96■■□□□ 1.75
SMPD1-210ENST00000534405 WASHC2CQ9Y4E1 1318 aa25.96■■□□□ 1.75
SMPD1-210ENST00000534405 CROCC2H7BZ55 1655 aa25.96■■□□□ 1.75
SMPD1-210ENST00000534405 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
SMPD1-210ENST00000534405 ZBTB47Q9UFB7 747 aaPredicted RBP25.95■■□□□ 1.75
SMPD1-210ENST00000534405 HNRNPUQ00839 825 aaKnown RBP eCLIP25.95■■□□□ 1.74
SMPD1-210ENST00000534405 CCDC184Q52MB2 194 aa25.94■■□□□ 1.74
SMPD1-210ENST00000534405 SPATA31E1Q6ZUB1 1445 aa25.94■■□□□ 1.74
SMPD1-210ENST00000534405 B4GALNT3Q6L9W6 998 aa25.92■■□□□ 1.74
SMPD1-210ENST00000534405 ABCA8O94911 1581 aa25.91■■□□□ 1.74
SMPD1-210ENST00000534405 EIF5BO60841 1220 aaKnown RBP25.9■■□□□ 1.74
SMPD1-210ENST00000534405 USP35Q9P2H5 1018 aa25.9■■□□□ 1.74
SMPD1-210ENST00000534405 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.73
SMPD1-210ENST00000534405 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
SMPD1-210ENST00000534405 ATP10BO94823 1461 aa25.88■■□□□ 1.73
SMPD1-210ENST00000534405 ABCC10Q5T3U5 1492 aa25.87■■□□□ 1.73
SMPD1-210ENST00000534405 KIF7Q2M1P5 1343 aa25.87■■□□□ 1.73
SMPD1-210ENST00000534405 ANKRD30AQ9BXX3 1397 aa25.87■■□□□ 1.73
SMPD1-210ENST00000534405 PRKRIP1Q9H875 184 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-210ENST00000534405 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
SMPD1-210ENST00000534405 PLEKHD1A6NEE1 506 aa25.86■■□□□ 1.73
SMPD1-210ENST00000534405 PKD2Q13563 968 aa25.85■■□□□ 1.73
SMPD1-210ENST00000534405 ANKRD50Q9ULJ7 1429 aa25.85■■□□□ 1.73
SMPD1-210ENST00000534405 POLR1AO95602 1720 aaPredicted RBP25.82■■□□□ 1.72
SMPD1-210ENST00000534405 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
SMPD1-210ENST00000534405 SHANK2Q9UPX8 1470 aa25.77■■□□□ 1.72
SMPD1-210ENST00000534405 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
SMPD1-210ENST00000534405 NUP155O75694 1391 aa25.74■■□□□ 1.71
SMPD1-210ENST00000534405 MRS2Q9HD23 443 aa25.74■■□□□ 1.71
SMPD1-210ENST00000534405 BCORL1Q5H9F3 1711 aa25.73■■□□□ 1.71
SMPD1-210ENST00000534405 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
SMPD1-210ENST00000534405 USP47Q96K76 1375 aa25.72■■□□□ 1.71
SMPD1-210ENST00000534405 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMPD1-210ENST00000534405 NEFMP07197 916 aa25.71■■□□□ 1.71
SMPD1-210ENST00000534405 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
SMPD1-210ENST00000534405 BRPF3Q9ULD4 1205 aa25.7■■□□□ 1.7
SMPD1-210ENST00000534405 PTPRGP23470 1445 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms