RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 ZMYM4Q5VZL5 1548 aa17.65■□□□□ 0.42
NEDD8-MDP1-202ENST00000534348 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
NEDD8-MDP1-202ENST00000534348 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
NEDD8-MDP1-202ENST00000534348 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 SCAPERQ9BY12 1400 aa17.61■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 ATP10AO60312 1499 aa17.6■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.41
NEDD8-MDP1-202ENST00000534348 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 ZNF335Q9H4Z2 1342 aaPredicted RBP17.56■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 HSPA1LP34931 641 aa17.52■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 PIP4K2BP78356 416 aa17.52■□□□□ 0.4
NEDD8-MDP1-202ENST00000534348 NCOA1Q15788 1441 aa17.51■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 MED1Q15648 1581 aaPredicted RBP17.49■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 PLCH2O75038 1416 aa17.47■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 C3P01024 1663 aa17.46■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
NEDD8-MDP1-202ENST00000534348 CAMSAP1Q5T5Y3 1602 aa17.44■□□□□ 0.38
NEDD8-MDP1-202ENST00000534348 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
NEDD8-MDP1-202ENST00000534348 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
NEDD8-MDP1-202ENST00000534348 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
NEDD8-MDP1-202ENST00000534348 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
NEDD8-MDP1-202ENST00000534348 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
NEDD8-MDP1-202ENST00000534348 TOM1O60784 492 aa17.36■□□□□ 0.37
NEDD8-MDP1-202ENST00000534348 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
NEDD8-MDP1-202ENST00000534348 PKD2Q13563 968 aa17.33■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 ARHGAP5Q13017 1502 aa17.32■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 KDM5CP41229 1560 aa17.31■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 AGLP35573 1532 aa17.28■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 NPATQ14207 1427 aa17.28■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
NEDD8-MDP1-202ENST00000534348 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 KIF14Q15058 1648 aa17.25■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 SUPT6HQ7KZ85 1726 aaKnown RBP17.22■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 RGS17Q9UGC6 210 aaPredicted RBP17.22■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
NEDD8-MDP1-202ENST00000534348 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 GGT6Q6P531 493 aa17.18■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 CPS1P31327 1500 aa17.17■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 ZNF142P52746 1687 aaPredicted RBP17.16■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
NEDD8-MDP1-202ENST00000534348 CLIP1P30622 1438 aa17.14■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 ABCC1P33527 1531 aa17.13■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-202ENST00000534348 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 A2MP01023 1474 aa17.02■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
NEDD8-MDP1-202ENST00000534348 TNRQ92752 1358 aa17.01■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 NPHP4O75161 1426 aaPredicted RBP17■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 SRCAPQ6ZRS2 3230 aa16.97■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 LRRIQ1Q96JM4 1722 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms