RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
SIPA1-209ENST00000534313 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
SIPA1-209ENST00000534313 WDR62O43379 1518 aa23.96■■□□□ 1.43
SIPA1-209ENST00000534313 FBLN2P98095 1184 aa23.96■■□□□ 1.43
SIPA1-209ENST00000534313 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
SIPA1-209ENST00000534313 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
SIPA1-209ENST00000534313 GCC2Q8IWJ2 1684 aa23.94■■□□□ 1.42
SIPA1-209ENST00000534313 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
SIPA1-209ENST00000534313 DAPK1P53355 1430 aa23.92■■□□□ 1.42
SIPA1-209ENST00000534313 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
SIPA1-209ENST00000534313 ABCC5O15440 1437 aa23.91■■□□□ 1.42
SIPA1-209ENST00000534313 RBM19Q9Y4C8 960 aaKnown RBP23.9■■□□□ 1.42
SIPA1-209ENST00000534313 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
SIPA1-209ENST00000534313 AKNAQ7Z591 1439 aa23.87■■□□□ 1.41
SIPA1-209ENST00000534313 MRS2Q9HD23 443 aa23.87■■□□□ 1.41
SIPA1-209ENST00000534313 CFDP1Q9UEE9 299 aaPredicted RBP23.87■■□□□ 1.41
SIPA1-209ENST00000534313 PRG4Q92954 1404 aaPredicted RBP23.86■■□□□ 1.41
SIPA1-209ENST00000534313 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
SIPA1-209ENST00000534313 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
SIPA1-209ENST00000534313 CNTLNQ9NXG0 1405 aa23.86■■□□□ 1.41
SIPA1-209ENST00000534313 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
SIPA1-209ENST00000534313 SENP3-EIF4A1A0A087X0R7 540 aa23.85■■□□□ 1.41
SIPA1-209ENST00000534313 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
SIPA1-209ENST00000534313 PRKRIP1Q9H875 184 aaPredicted RBP23.85■■□□□ 1.41
SIPA1-209ENST00000534313 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
SIPA1-209ENST00000534313 KIF7Q2M1P5 1343 aa23.81■■□□□ 1.4
SIPA1-209ENST00000534313 KIAA0586Q9BVV6 1533 aa23.81■■□□□ 1.4
SIPA1-209ENST00000534313 KIAA0556O60303 1618 aa23.8■■□□□ 1.4
SIPA1-209ENST00000534313 RPRD2Q5VT52 1461 aaKnown RBP23.8■■□□□ 1.4
SIPA1-209ENST00000534313 NCOA1Q15788 1441 aa23.79■■□□□ 1.4
SIPA1-209ENST00000534313 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
SIPA1-209ENST00000534313 PLB1Q6P1J6 1458 aa23.77■■□□□ 1.4
SIPA1-209ENST00000534313 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
SIPA1-209ENST00000534313 TEX14Q8IWB6 1497 aa23.76■■□□□ 1.39
SIPA1-209ENST00000534313 PKD2Q13563 968 aa23.75■■□□□ 1.39
SIPA1-209ENST00000534313 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
SIPA1-209ENST00000534313 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
SIPA1-209ENST00000534313 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
SIPA1-209ENST00000534313 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
SIPA1-209ENST00000534313 TROQ12816 1431 aaPredicted RBP23.69■■□□□ 1.38
SIPA1-209ENST00000534313 PZPP20742 1482 aa23.68■■□□□ 1.38
SIPA1-209ENST00000534313 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
SIPA1-209ENST00000534313 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
SIPA1-209ENST00000534313 SPATA31E1Q6ZUB1 1445 aa23.66■■□□□ 1.38
SIPA1-209ENST00000534313 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
SIPA1-209ENST00000534313 GPATCH8Q9UKJ3 1502 aaKnown RBP23.65■■□□□ 1.38
SIPA1-209ENST00000534313 B4GALNT3Q6L9W6 998 aa23.65■■□□□ 1.38
SIPA1-209ENST00000534313 KIF14Q15058 1648 aa23.64■■□□□ 1.37
SIPA1-209ENST00000534313 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
SIPA1-209ENST00000534313 USP47Q96K76 1375 aa23.62■■□□□ 1.37
SIPA1-209ENST00000534313 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
SIPA1-209ENST00000534313 NUP155O75694 1391 aa23.59■■□□□ 1.37
SIPA1-209ENST00000534313 ZBED9Q6R2W3 1325 aa23.59■■□□□ 1.37
SIPA1-209ENST00000534313 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
SIPA1-209ENST00000534313 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
SIPA1-209ENST00000534313 MSH5O43196 834 aa23.58■■□□□ 1.37
SIPA1-209ENST00000534313 CEP170Q5SW79 1584 aa23.58■■□□□ 1.37
SIPA1-209ENST00000534313 HNRNPMP52272 730 aaKnown RBP eCLIP23.58■■□□□ 1.36
SIPA1-209ENST00000534313 PPP4R2Q9NY27 417 aa23.57■■□□□ 1.36
SIPA1-209ENST00000534313 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
SIPA1-209ENST00000534313 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
SIPA1-209ENST00000534313 CARMIL2Q6F5E8 1435 aa23.52■■□□□ 1.36
SIPA1-209ENST00000534313 TSPY4P0CV99 314 aa23.52■■□□□ 1.36
SIPA1-209ENST00000534313 TSPY10P0CW01 314 aa23.52■■□□□ 1.36
SIPA1-209ENST00000534313 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
SIPA1-209ENST00000534313 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
SIPA1-209ENST00000534313 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
SIPA1-209ENST00000534313 BCORL1Q5H9F3 1711 aa23.49■■□□□ 1.35
SIPA1-209ENST00000534313 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
SIPA1-209ENST00000534313 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
SIPA1-209ENST00000534313 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
SIPA1-209ENST00000534313 MBD5Q9P267 1494 aa23.47■■□□□ 1.35
SIPA1-209ENST00000534313 ITSN2Q9NZM3 1697 aa23.46■■□□□ 1.35
SIPA1-209ENST00000534313 TMC1Q8TDI8 760 aa23.45■■□□□ 1.34
SIPA1-209ENST00000534313 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
SIPA1-209ENST00000534313 ADGRL2O95490 1459 aa23.45■■□□□ 1.34
SIPA1-209ENST00000534313 ATP10BO94823 1461 aa23.44■■□□□ 1.34
SIPA1-209ENST00000534313 SALL2Q9Y467 1007 aaPredicted RBP23.44■■□□□ 1.34
SIPA1-209ENST00000534313 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
SIPA1-209ENST00000534313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
SIPA1-209ENST00000534313 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
SIPA1-209ENST00000534313 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
SIPA1-209ENST00000534313 NBR1Q14596 966 aa23.38■■□□□ 1.33
SIPA1-209ENST00000534313 NUP160Q12769 1436 aa23.38■■□□□ 1.33
SIPA1-209ENST00000534313 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
SIPA1-209ENST00000534313 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
SIPA1-209ENST00000534313 CROCC2H7BZ55 1655 aa23.37■■□□□ 1.33
SIPA1-209ENST00000534313 KDM5CP41229 1560 aa23.37■■□□□ 1.33
SIPA1-209ENST00000534313 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
SIPA1-209ENST00000534313 ADCY10Q96PN6 1610 aa23.35■■□□□ 1.33
SIPA1-209ENST00000534313 CDC42BPAQ5VT25 1732 aa23.35■■□□□ 1.33
SIPA1-209ENST00000534313 POLR1AO95602 1720 aaPredicted RBP23.34■■□□□ 1.33
SIPA1-209ENST00000534313 FANCIQ9NVI1 1328 aa23.34■■□□□ 1.33
SIPA1-209ENST00000534313 ROCK2O75116 1388 aaKnown RBP23.34■■□□□ 1.33
SIPA1-209ENST00000534313 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.32
SIPA1-209ENST00000534313 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
SIPA1-209ENST00000534313 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
SIPA1-209ENST00000534313 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
SIPA1-209ENST00000534313 ABCA8O94911 1581 aa23.3■■□□□ 1.32
SIPA1-209ENST00000534313 PTPRGP23470 1445 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms