RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
SCUBE2-213ENST00000534295 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
SCUBE2-213ENST00000534295 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
SCUBE2-213ENST00000534295 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
SCUBE2-213ENST00000534295 ATP10AO60312 1499 aa20.52■□□□□ 0.88
SCUBE2-213ENST00000534295 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
SCUBE2-213ENST00000534295 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
SCUBE2-213ENST00000534295 ARHGEF12Q9NZN5 1544 aa20.49■□□□□ 0.87
SCUBE2-213ENST00000534295 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
SCUBE2-213ENST00000534295 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
SCUBE2-213ENST00000534295 MLECQ14165 292 aa20.48■□□□□ 0.87
SCUBE2-213ENST00000534295 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
SCUBE2-213ENST00000534295 ARHGAP35Q9NRY4 1499 aa20.44■□□□□ 0.86
SCUBE2-213ENST00000534295 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
SCUBE2-213ENST00000534295 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
SCUBE2-213ENST00000534295 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
SCUBE2-213ENST00000534295 FER1L4A9Z1Z3 1794 aa20.42■□□□□ 0.86
SCUBE2-213ENST00000534295 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
SCUBE2-213ENST00000534295 KDM5CP41229 1560 aa20.4■□□□□ 0.86
SCUBE2-213ENST00000534295 CEBPAP49715 358 aaPredicted RBP20.39■□□□□ 0.85
SCUBE2-213ENST00000534295 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
SCUBE2-213ENST00000534295 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
SCUBE2-213ENST00000534295 CLIP1P30622 1438 aa20.36■□□□□ 0.85
SCUBE2-213ENST00000534295 KIF14Q15058 1648 aa20.36■□□□□ 0.85
SCUBE2-213ENST00000534295 MLH3Q9UHC1 1453 aa20.36■□□□□ 0.85
SCUBE2-213ENST00000534295 REREQ9P2R6 1566 aa20.35■□□□□ 0.85
SCUBE2-213ENST00000534295 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
SCUBE2-213ENST00000534295 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
SCUBE2-213ENST00000534295 SETD1BQ9UPS6 1966 aaKnown RBP20.33■□□□□ 0.84
SCUBE2-213ENST00000534295 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
SCUBE2-213ENST00000534295 UHRF1BP1Q6BDS2 1440 aa20.31■□□□□ 0.84
SCUBE2-213ENST00000534295 AGLP35573 1532 aa20.31■□□□□ 0.84
SCUBE2-213ENST00000534295 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
SCUBE2-213ENST00000534295 PTPRTO14522 1441 aa20.27■□□□□ 0.84
SCUBE2-213ENST00000534295 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.84
SCUBE2-213ENST00000534295 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.84
SCUBE2-213ENST00000534295 CASKIN1Q8WXD9 1431 aa20.26■□□□□ 0.83
SCUBE2-213ENST00000534295 CDC42BPBQ9Y5S2 1711 aa20.25■□□□□ 0.83
SCUBE2-213ENST00000534295 ABCC1P33527 1531 aa20.24■□□□□ 0.83
SCUBE2-213ENST00000534295 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
SCUBE2-213ENST00000534295 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
SCUBE2-213ENST00000534295 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
SCUBE2-213ENST00000534295 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
SCUBE2-213ENST00000534295 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
SCUBE2-213ENST00000534295 C3P01024 1663 aa20.19■□□□□ 0.82
SCUBE2-213ENST00000534295 KIDINS220Q9ULH0 1771 aa20.17■□□□□ 0.82
SCUBE2-213ENST00000534295 NPATQ14207 1427 aa20.17■□□□□ 0.82
SCUBE2-213ENST00000534295 NCOA1Q15788 1441 aa20.16■□□□□ 0.82
SCUBE2-213ENST00000534295 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
SCUBE2-213ENST00000534295 LTBP4Q8N2S1 1624 aa20.15■□□□□ 0.82
SCUBE2-213ENST00000534295 CDC42BPAQ5VT25 1732 aa20.14■□□□□ 0.81
SCUBE2-213ENST00000534295 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
SCUBE2-213ENST00000534295 IQSEC2Q5JU85 1478 aa20.13■□□□□ 0.81
SCUBE2-213ENST00000534295 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
SCUBE2-213ENST00000534295 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
SCUBE2-213ENST00000534295 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
SCUBE2-213ENST00000534295 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
SCUBE2-213ENST00000534295 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
SCUBE2-213ENST00000534295 KIAA1107Q9UPP5 1409 aa20.11■□□□□ 0.81
SCUBE2-213ENST00000534295 DISP3Q9P2K9 1392 aa20.11■□□□□ 0.81
SCUBE2-213ENST00000534295 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
SCUBE2-213ENST00000534295 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCUBE2-213ENST00000534295 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
SCUBE2-213ENST00000534295 SOCS7O14512 581 aa20.07■□□□□ 0.8
SCUBE2-213ENST00000534295 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
SCUBE2-213ENST00000534295 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
SCUBE2-213ENST00000534295 SYCP2Q9BX26 1530 aa20.05■□□□□ 0.8
SCUBE2-213ENST00000534295 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
SCUBE2-213ENST00000534295 CAMSAP1Q5T5Y3 1602 aa20.04■□□□□ 0.8
SCUBE2-213ENST00000534295 PKD2Q13563 968 aa20.03■□□□□ 0.8
SCUBE2-213ENST00000534295 A2MP01023 1474 aa20.03■□□□□ 0.8
SCUBE2-213ENST00000534295 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
SCUBE2-213ENST00000534295 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
SCUBE2-213ENST00000534295 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
SCUBE2-213ENST00000534295 PTPRKQ15262 1439 aa20.02■□□□□ 0.79
SCUBE2-213ENST00000534295 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
SCUBE2-213ENST00000534295 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
SCUBE2-213ENST00000534295 NCKAP5LQ9HCH0 1330 aa20.01■□□□□ 0.79
SCUBE2-213ENST00000534295 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
SCUBE2-213ENST00000534295 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
SCUBE2-213ENST00000534295 TCOF1Q13428 1488 aaKnown RBP19.99■□□□□ 0.79
SCUBE2-213ENST00000534295 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
SCUBE2-213ENST00000534295 GGT6Q6P531 493 aa19.96■□□□□ 0.79
SCUBE2-213ENST00000534295 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
SCUBE2-213ENST00000534295 ZNF142P52746 1687 aaPredicted RBP19.95■□□□□ 0.78
SCUBE2-213ENST00000534295 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
SCUBE2-213ENST00000534295 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
SCUBE2-213ENST00000534295 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
SCUBE2-213ENST00000534295 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
SCUBE2-213ENST00000534295 CEP170BQ9Y4F5 1589 aaPredicted RBP19.93■□□□□ 0.78
SCUBE2-213ENST00000534295 CLTCQ00610 1675 aaKnown RBP19.93■□□□□ 0.78
SCUBE2-213ENST00000534295 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
SCUBE2-213ENST00000534295 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
SCUBE2-213ENST00000534295 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
SCUBE2-213ENST00000534295 UBAP1LF5GYI3 381 aa19.9■□□□□ 0.78
SCUBE2-213ENST00000534295 A2ML1A8K2U0 1454 aa19.89■□□□□ 0.77
SCUBE2-213ENST00000534295 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
SCUBE2-213ENST00000534295 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
SCUBE2-213ENST00000534295 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
SCUBE2-213ENST00000534295 RSPH4AQ5TD94 716 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms