RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
SOX9-AS1-213ENST00000533996 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.15
SOX9-AS1-213ENST00000533996 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
SOX9-AS1-213ENST00000533996 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
SOX9-AS1-213ENST00000533996 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
SOX9-AS1-213ENST00000533996 ILDR2Q71H61 639 aa15.94■□□□□ 0.14
SOX9-AS1-213ENST00000533996 MAGI2Q86UL8 1455 aa15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
SOX9-AS1-213ENST00000533996 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
SOX9-AS1-213ENST00000533996 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
SOX9-AS1-213ENST00000533996 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
SOX9-AS1-213ENST00000533996 PREX1Q8TCU6 1659 aa15.9■□□□□ 0.14
SOX9-AS1-213ENST00000533996 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
SOX9-AS1-213ENST00000533996 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
SOX9-AS1-213ENST00000533996 YEATS2Q9ULM3 1422 aa15.88■□□□□ 0.13
SOX9-AS1-213ENST00000533996 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
SOX9-AS1-213ENST00000533996 NUP153P49790 1475 aaKnown RBP15.87■□□□□ 0.13
SOX9-AS1-213ENST00000533996 STRCQ7RTU9 1775 aa15.85■□□□□ 0.13
SOX9-AS1-213ENST00000533996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
SOX9-AS1-213ENST00000533996 SETD1BQ9UPS6 1966 aaKnown RBP15.84■□□□□ 0.13
SOX9-AS1-213ENST00000533996 ARHGEF12Q9NZN5 1544 aa15.84■□□□□ 0.13
SOX9-AS1-213ENST00000533996 HECW1Q76N89 1606 aa15.83■□□□□ 0.13
SOX9-AS1-213ENST00000533996 MLECQ14165 292 aa15.82■□□□□ 0.12
SOX9-AS1-213ENST00000533996 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
SOX9-AS1-213ENST00000533996 ATP10AO60312 1499 aa15.81■□□□□ 0.12
SOX9-AS1-213ENST00000533996 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
SOX9-AS1-213ENST00000533996 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
SOX9-AS1-213ENST00000533996 PTPRTO14522 1441 aa15.78■□□□□ 0.12
SOX9-AS1-213ENST00000533996 C9orf84Q5VXU9 1444 aa15.78■□□□□ 0.12
SOX9-AS1-213ENST00000533996 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
SOX9-AS1-213ENST00000533996 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.12
SOX9-AS1-213ENST00000533996 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
SOX9-AS1-213ENST00000533996 PLCH2O75038 1416 aa15.77■□□□□ 0.11
SOX9-AS1-213ENST00000533996 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
SOX9-AS1-213ENST00000533996 EFCAB2Q5VUJ9 269 aa15.71■□□□□ 0.11
SOX9-AS1-213ENST00000533996 LTBP4Q8N2S1 1624 aa15.71■□□□□ 0.11
SOX9-AS1-213ENST00000533996 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
SOX9-AS1-213ENST00000533996 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
SOX9-AS1-213ENST00000533996 C3P01024 1663 aa15.68■□□□□ 0.1
SOX9-AS1-213ENST00000533996 REREQ9P2R6 1566 aa15.68■□□□□ 0.1
SOX9-AS1-213ENST00000533996 KDM5CP41229 1560 aa15.66■□□□□ 0.1
SOX9-AS1-213ENST00000533996 TRAPPC8Q9Y2L5 1435 aa15.65■□□□□ 0.1
SOX9-AS1-213ENST00000533996 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
SOX9-AS1-213ENST00000533996 ESF1Q9H501 851 aaKnown RBP15.64■□□□□ 0.09
SOX9-AS1-213ENST00000533996 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
SOX9-AS1-213ENST00000533996 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
SOX9-AS1-213ENST00000533996 AGLP35573 1532 aa15.63■□□□□ 0.09
SOX9-AS1-213ENST00000533996 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
SOX9-AS1-213ENST00000533996 EEA1Q15075 1411 aa15.62■□□□□ 0.09
SOX9-AS1-213ENST00000533996 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
SOX9-AS1-213ENST00000533996 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
SOX9-AS1-213ENST00000533996 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
SOX9-AS1-213ENST00000533996 MLH3Q9UHC1 1453 aa15.6■□□□□ 0.09
SOX9-AS1-213ENST00000533996 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
SOX9-AS1-213ENST00000533996 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
SOX9-AS1-213ENST00000533996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.08
SOX9-AS1-213ENST00000533996 KIF14Q15058 1648 aa15.57■□□□□ 0.08
SOX9-AS1-213ENST00000533996 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
SOX9-AS1-213ENST00000533996 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
SOX9-AS1-213ENST00000533996 NPATQ14207 1427 aa15.56■□□□□ 0.08
SOX9-AS1-213ENST00000533996 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
SOX9-AS1-213ENST00000533996 MROH2AA6NES4 1674 aa15.56■□□□□ 0.08
SOX9-AS1-213ENST00000533996 CAMSAP1Q5T5Y3 1602 aa15.55■□□□□ 0.08
SOX9-AS1-213ENST00000533996 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
SOX9-AS1-213ENST00000533996 CDC42BPBQ9Y5S2 1711 aa15.54■□□□□ 0.08
SOX9-AS1-213ENST00000533996 CLIP1P30622 1438 aa15.53■□□□□ 0.08
SOX9-AS1-213ENST00000533996 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
SOX9-AS1-213ENST00000533996 PKD2Q13563 968 aa15.53■□□□□ 0.08
SOX9-AS1-213ENST00000533996 ATP1B4Q9UN42 357 aaPredicted RBP15.51■□□□□ 0.07
SOX9-AS1-213ENST00000533996 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
SOX9-AS1-213ENST00000533996 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ZNF335Q9H4Z2 1342 aaPredicted RBP15.49■□□□□ 0.07
SOX9-AS1-213ENST00000533996 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ITSN2Q9NZM3 1697 aa15.49■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ABCC1P33527 1531 aa15.48■□□□□ 0.07
SOX9-AS1-213ENST00000533996 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
SOX9-AS1-213ENST00000533996 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
SOX9-AS1-213ENST00000533996 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
SOX9-AS1-213ENST00000533996 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
SOX9-AS1-213ENST00000533996 MED1Q15648 1581 aaPredicted RBP15.44■□□□□ 0.06
SOX9-AS1-213ENST00000533996 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
SOX9-AS1-213ENST00000533996 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
SOX9-AS1-213ENST00000533996 CEP170BQ9Y4F5 1589 aaPredicted RBP15.42■□□□□ 0.06
SOX9-AS1-213ENST00000533996 TOM1O60784 492 aa15.42■□□□□ 0.06
SOX9-AS1-213ENST00000533996 ARHGAP35Q9NRY4 1499 aa15.41■□□□□ 0.06
SOX9-AS1-213ENST00000533996 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
SOX9-AS1-213ENST00000533996 HSPA1LP34931 641 aa15.4■□□□□ 0.06
SOX9-AS1-213ENST00000533996 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
SOX9-AS1-213ENST00000533996 CDC42BPAQ5VT25 1732 aa15.4■□□□□ 0.06
SOX9-AS1-213ENST00000533996 CPS1P31327 1500 aa15.39■□□□□ 0.05
SOX9-AS1-213ENST00000533996 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
SOX9-AS1-213ENST00000533996 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
SOX9-AS1-213ENST00000533996 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
SOX9-AS1-213ENST00000533996 SPAG9O60271 1321 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms