RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
MS4A6A-220ENST00000533989 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
MS4A6A-220ENST00000533989 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
MS4A6A-220ENST00000533989 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
MS4A6A-220ENST00000533989 PTPRMP28827 1452 aa13.07□□□□□ -0.32
MS4A6A-220ENST00000533989 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 ZMYM4Q5VZL5 1548 aa13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 TTC37Q6PGP7 1564 aa13.06□□□□□ -0.32
MS4A6A-220ENST00000533989 PLCH2O75038 1416 aa13.05□□□□□ -0.32
MS4A6A-220ENST00000533989 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
MS4A6A-220ENST00000533989 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
MS4A6A-220ENST00000533989 RICTORQ6R327 1708 aa13.04□□□□□ -0.32
MS4A6A-220ENST00000533989 HECW1Q76N89 1606 aa13.03□□□□□ -0.32
MS4A6A-220ENST00000533989 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
MS4A6A-220ENST00000533989 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
MS4A6A-220ENST00000533989 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
MS4A6A-220ENST00000533989 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
MS4A6A-220ENST00000533989 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
MS4A6A-220ENST00000533989 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
MS4A6A-220ENST00000533989 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
MS4A6A-220ENST00000533989 TROQ12816 1431 aaPredicted RBP12.99□□□□□ -0.33
MS4A6A-220ENST00000533989 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
MS4A6A-220ENST00000533989 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
MS4A6A-220ENST00000533989 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
MS4A6A-220ENST00000533989 DSG3P32926 999 aa12.97□□□□□ -0.33
MS4A6A-220ENST00000533989 CLIP1P30622 1438 aa12.96□□□□□ -0.33
MS4A6A-220ENST00000533989 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
MS4A6A-220ENST00000533989 KIF14Q15058 1648 aa12.95□□□□□ -0.34
MS4A6A-220ENST00000533989 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
MS4A6A-220ENST00000533989 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
MS4A6A-220ENST00000533989 ATP10AO60312 1499 aa12.95□□□□□ -0.34
MS4A6A-220ENST00000533989 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
MS4A6A-220ENST00000533989 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
MS4A6A-220ENST00000533989 CCDC18Q5T9S5 1454 aa12.93□□□□□ -0.34
MS4A6A-220ENST00000533989 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
MS4A6A-220ENST00000533989 KDM5CP41229 1560 aa12.92□□□□□ -0.34
MS4A6A-220ENST00000533989 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
MS4A6A-220ENST00000533989 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
MS4A6A-220ENST00000533989 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
MS4A6A-220ENST00000533989 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
MS4A6A-220ENST00000533989 FYCO1Q9BQS8 1478 aa12.9□□□□□ -0.34
MS4A6A-220ENST00000533989 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
MS4A6A-220ENST00000533989 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
MS4A6A-220ENST00000533989 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
MS4A6A-220ENST00000533989 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
MS4A6A-220ENST00000533989 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
MS4A6A-220ENST00000533989 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
MS4A6A-220ENST00000533989 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
MS4A6A-220ENST00000533989 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
MS4A6A-220ENST00000533989 ABCC1P33527 1531 aa12.85□□□□□ -0.35
MS4A6A-220ENST00000533989 MLECQ14165 292 aa12.85□□□□□ -0.35
MS4A6A-220ENST00000533989 AGLP35573 1532 aa12.84□□□□□ -0.35
MS4A6A-220ENST00000533989 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
MS4A6A-220ENST00000533989 DIP2CQ9Y2E4 1556 aa12.84□□□□□ -0.35
MS4A6A-220ENST00000533989 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
MS4A6A-220ENST00000533989 CAPN15O75808 1086 aa12.83□□□□□ -0.36
MS4A6A-220ENST00000533989 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
MS4A6A-220ENST00000533989 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
MS4A6A-220ENST00000533989 HSPA2P54652 639 aa12.82□□□□□ -0.36
MS4A6A-220ENST00000533989 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
MS4A6A-220ENST00000533989 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
MS4A6A-220ENST00000533989 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
MS4A6A-220ENST00000533989 ITSN2Q9NZM3 1697 aa12.79□□□□□ -0.36
MS4A6A-220ENST00000533989 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.36
MS4A6A-220ENST00000533989 CEBPAP49715 358 aaPredicted RBP12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 PLEKHH2Q8IVE3 1493 aa12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.37
MS4A6A-220ENST00000533989 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
MS4A6A-220ENST00000533989 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
MS4A6A-220ENST00000533989 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
MS4A6A-220ENST00000533989 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
MS4A6A-220ENST00000533989 CCNB3Q8WWL7 1395 aa12.74□□□□□ -0.37
MS4A6A-220ENST00000533989 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
MS4A6A-220ENST00000533989 MTUS2Q5JR59 1369 aa12.73□□□□□ -0.37
MS4A6A-220ENST00000533989 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
MS4A6A-220ENST00000533989 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
MS4A6A-220ENST00000533989 ESF1Q9H501 851 aaKnown RBP12.72□□□□□ -0.37
MS4A6A-220ENST00000533989 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
MS4A6A-220ENST00000533989 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
MS4A6A-220ENST00000533989 NPATQ14207 1427 aa12.71□□□□□ -0.37
MS4A6A-220ENST00000533989 CEP162Q5TB80 1403 aa12.71□□□□□ -0.37
MS4A6A-220ENST00000533989 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
MS4A6A-220ENST00000533989 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
MS4A6A-220ENST00000533989 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-220ENST00000533989 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
MS4A6A-220ENST00000533989 C3P01024 1663 aa12.7□□□□□ -0.38
MS4A6A-220ENST00000533989 PTPRTO14522 1441 aa12.7□□□□□ -0.38
MS4A6A-220ENST00000533989 A2MP01023 1474 aa12.69□□□□□ -0.38
MS4A6A-220ENST00000533989 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
MS4A6A-220ENST00000533989 ZBTB22O15209 634 aa12.68□□□□□ -0.38
MS4A6A-220ENST00000533989 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
MS4A6A-220ENST00000533989 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
MS4A6A-220ENST00000533989 ZMYM3Q14202 1370 aa12.68□□□□□ -0.38
MS4A6A-220ENST00000533989 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms