RNA–Protein interactions for RNA: ENST00000533949.1

AP004607.2-201, humanhuman

BASIC

Gene AP004607.2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004607.2-201ENST00000533949 UGGT2Q9NYU1 1516 aa8.66□□□□□ -1.02
AP004607.2-201ENST00000533949 NEO1Q92859 1461 aa8.66□□□□□ -1.02
AP004607.2-201ENST00000533949 RGS17Q9UGC6 210 aaPredicted RBP8.66□□□□□ -1.02
AP004607.2-201ENST00000533949 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.02
AP004607.2-201ENST00000533949 ABCA8O94911 1581 aa8.65□□□□□ -1.02
AP004607.2-201ENST00000533949 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
AP004607.2-201ENST00000533949 ARHGAP35Q9NRY4 1499 aa8.65□□□□□ -1.02
AP004607.2-201ENST00000533949 FHOD3Q2V2M9 1422 aa8.65□□□□□ -1.02
AP004607.2-201ENST00000533949 RICTORQ6R327 1708 aa8.65□□□□□ -1.03
AP004607.2-201ENST00000533949 AKNAQ7Z591 1439 aa8.64□□□□□ -1.03
AP004607.2-201ENST00000533949 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
AP004607.2-201ENST00000533949 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
AP004607.2-201ENST00000533949 SCAF1Q9H7N4 1312 aaKnown RBP8.63□□□□□ -1.03
AP004607.2-201ENST00000533949 PIP4K2BP78356 416 aa8.63□□□□□ -1.03
AP004607.2-201ENST00000533949 ZFYVE16Q7Z3T8 1539 aa8.62□□□□□ -1.03
AP004607.2-201ENST00000533949 DENND4BO75064 1496 aaPredicted RBP8.62□□□□□ -1.03
AP004607.2-201ENST00000533949 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
AP004607.2-201ENST00000533949 SAMD9Q5K651 1589 aa8.61□□□□□ -1.03
AP004607.2-201ENST00000533949 ZMYM4Q5VZL5 1548 aa8.6□□□□□ -1.03
AP004607.2-201ENST00000533949 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
AP004607.2-201ENST00000533949 SETD1BQ9UPS6 1966 aaKnown RBP8.59□□□□□ -1.03
AP004607.2-201ENST00000533949 ATP10BO94823 1461 aa8.58□□□□□ -1.04
AP004607.2-201ENST00000533949 SETD1AO15047 1707 aaKnown RBP8.58□□□□□ -1.04
AP004607.2-201ENST00000533949 NCKAP5LQ9HCH0 1330 aa8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 SENP3Q9H4L4 574 aaPredicted RBP8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 ALKQ9UM73 1620 aa8.57□□□□□ -1.04
AP004607.2-201ENST00000533949 CAMSAP1Q5T5Y3 1602 aa8.56□□□□□ -1.04
AP004607.2-201ENST00000533949 VPS8Q8N3P4 1428 aa8.55□□□□□ -1.04
AP004607.2-201ENST00000533949 C3P01024 1663 aa8.55□□□□□ -1.04
AP004607.2-201ENST00000533949 MAGI2Q86UL8 1455 aa8.53□□□□□ -1.04
AP004607.2-201ENST00000533949 C9orf84Q5VXU9 1444 aa8.53□□□□□ -1.04
AP004607.2-201ENST00000533949 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
AP004607.2-201ENST00000533949 ATP10AO60312 1499 aa8.52□□□□□ -1.05
AP004607.2-201ENST00000533949 TOM1O60784 492 aa8.52□□□□□ -1.05
AP004607.2-201ENST00000533949 TRAPPC8Q9Y2L5 1435 aa8.52□□□□□ -1.05
AP004607.2-201ENST00000533949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.51□□□□□ -1.05
AP004607.2-201ENST00000533949 HNRNPUL2Q1KMD3 747 aaKnown RBP8.51□□□□□ -1.05
AP004607.2-201ENST00000533949 CASKIN1Q8WXD9 1431 aa8.51□□□□□ -1.05
AP004607.2-201ENST00000533949 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
AP004607.2-201ENST00000533949 NUP153P49790 1475 aaKnown RBP8.5□□□□□ -1.05
AP004607.2-201ENST00000533949 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
AP004607.2-201ENST00000533949 RAPGEF6Q8TEU7 1601 aa8.49□□□□□ -1.05
AP004607.2-201ENST00000533949 APLP2Q06481 763 aa8.48□□□□□ -1.05
AP004607.2-201ENST00000533949 UPF1Q92900 1129 aaKnown RBP eCLIP8.48□□□□□ -1.05
AP004607.2-201ENST00000533949 TCOF1Q13428 1488 aaKnown RBP8.48□□□□□ -1.05
AP004607.2-201ENST00000533949 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
AP004607.2-201ENST00000533949 CFAP74Q9C0B2 1584 aa8.47□□□□□ -1.05
AP004607.2-201ENST00000533949 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.05
AP004607.2-201ENST00000533949 PPP6R1Q9UPN7 881 aa8.46□□□□□ -1.06
AP004607.2-201ENST00000533949 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
AP004607.2-201ENST00000533949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.45□□□□□ -1.06
AP004607.2-201ENST00000533949 PKD2Q13563 968 aa8.45□□□□□ -1.06
AP004607.2-201ENST00000533949 LRRIQ1Q96JM4 1722 aa8.45□□□□□ -1.06
AP004607.2-201ENST00000533949 CPS1P31327 1500 aa8.44□□□□□ -1.06
AP004607.2-201ENST00000533949 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
AP004607.2-201ENST00000533949 PTPRKQ15262 1439 aa8.43□□□□□ -1.06
AP004607.2-201ENST00000533949 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
AP004607.2-201ENST00000533949 PLEKHD1A6NEE1 506 aa8.42□□□□□ -1.06
AP004607.2-201ENST00000533949 DIP2CQ9Y2E4 1556 aa8.42□□□□□ -1.06
AP004607.2-201ENST00000533949 ZNF142P52746 1687 aaPredicted RBP8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 CCDC18Q5T9S5 1454 aa8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 LRRC9Q6ZRR7 1453 aa8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 NPATQ14207 1427 aa8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 MTUS2Q5JR59 1369 aa8.41□□□□□ -1.06
AP004607.2-201ENST00000533949 VWDEQ8N2E2 1590 aa8.4□□□□□ -1.06
AP004607.2-201ENST00000533949 NEURL4Q96JN8 1562 aa8.4□□□□□ -1.06
AP004607.2-201ENST00000533949 CEP170BQ9Y4F5 1589 aaPredicted RBP8.4□□□□□ -1.06
AP004607.2-201ENST00000533949 CDK11AQ9UQ88 783 aaPredicted RBP8.4□□□□□ -1.06
AP004607.2-201ENST00000533949 AGLP35573 1532 aa8.39□□□□□ -1.07
AP004607.2-201ENST00000533949 SUPT6HQ7KZ85 1726 aaKnown RBP8.39□□□□□ -1.07
AP004607.2-201ENST00000533949 ABCA6Q8N139 1617 aa8.39□□□□□ -1.07
AP004607.2-201ENST00000533949 REREQ9P2R6 1566 aa8.39□□□□□ -1.07
AP004607.2-201ENST00000533949 TROQ12816 1431 aaPredicted RBP8.38□□□□□ -1.07
AP004607.2-201ENST00000533949 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
AP004607.2-201ENST00000533949 KDM5CP41229 1560 aa8.37□□□□□ -1.07
AP004607.2-201ENST00000533949 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
AP004607.2-201ENST00000533949 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
AP004607.2-201ENST00000533949 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
AP004607.2-201ENST00000533949 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
AP004607.2-201ENST00000533949 KIF14Q15058 1648 aa8.36□□□□□ -1.07
AP004607.2-201ENST00000533949 STRCP1A6NGW2 1772 aa8.36□□□□□ -1.07
AP004607.2-201ENST00000533949 NCOA2Q15596 1464 aa8.36□□□□□ -1.07
AP004607.2-201ENST00000533949 PLCH2O75038 1416 aa8.36□□□□□ -1.07
AP004607.2-201ENST00000533949 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
AP004607.2-201ENST00000533949 LRRC7Q96NW7 1537 aa8.35□□□□□ -1.07
AP004607.2-201ENST00000533949 MROH2AA6NES4 1674 aa8.35□□□□□ -1.07
AP004607.2-201ENST00000533949 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
AP004607.2-201ENST00000533949 RNF17Q9BXT8 1623 aaKnown RBP8.35□□□□□ -1.07
AP004607.2-201ENST00000533949 ZNF518AQ6AHZ1 1483 aa8.34□□□□□ -1.07
AP004607.2-201ENST00000533949 DNMT1P26358 1616 aaKnown RBP8.33□□□□□ -1.08
AP004607.2-201ENST00000533949 POLR1AO95602 1720 aaPredicted RBP8.33□□□□□ -1.08
AP004607.2-201ENST00000533949 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
AP004607.2-201ENST00000533949 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
AP004607.2-201ENST00000533949 ZNF644Q9H582 1327 aaPredicted RBP8.32□□□□□ -1.08
AP004607.2-201ENST00000533949 SETBP1Q9Y6X0 1596 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms