RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 MED1Q15648 1581 aaPredicted RBP15.97■□□□□ 0.15
PACS1-213ENST00000533756 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
PACS1-213ENST00000533756 ARHGEF12Q9NZN5 1544 aa15.96■□□□□ 0.15
PACS1-213ENST00000533756 SIGLEC1Q9BZZ2 1709 aa15.96■□□□□ 0.15
PACS1-213ENST00000533756 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
PACS1-213ENST00000533756 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
PACS1-213ENST00000533756 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
PACS1-213ENST00000533756 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
PACS1-213ENST00000533756 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
PACS1-213ENST00000533756 HSPA1LP34931 641 aa15.88■□□□□ 0.13
PACS1-213ENST00000533756 NCOA1Q15788 1441 aa15.87■□□□□ 0.13
PACS1-213ENST00000533756 ATP10AO60312 1499 aa15.86■□□□□ 0.13
PACS1-213ENST00000533756 CFAP74Q9C0B2 1584 aa15.85■□□□□ 0.13
PACS1-213ENST00000533756 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
PACS1-213ENST00000533756 HECW1Q76N89 1606 aa15.83■□□□□ 0.13
PACS1-213ENST00000533756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
PACS1-213ENST00000533756 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
PACS1-213ENST00000533756 ZNF335Q9H4Z2 1342 aaPredicted RBP15.83■□□□□ 0.12
PACS1-213ENST00000533756 CTTNBP2Q8WZ74 1663 aa15.82■□□□□ 0.12
PACS1-213ENST00000533756 TRAPPC8Q9Y2L5 1435 aa15.81■□□□□ 0.12
PACS1-213ENST00000533756 TOM1O60784 492 aa15.79■□□□□ 0.12
PACS1-213ENST00000533756 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
PACS1-213ENST00000533756 PLEKHD1A6NEE1 506 aa15.77■□□□□ 0.12
PACS1-213ENST00000533756 PIP4K2BP78356 416 aa15.76■□□□□ 0.11
PACS1-213ENST00000533756 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
PACS1-213ENST00000533756 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
PACS1-213ENST00000533756 CAMSAP1Q5T5Y3 1602 aa15.74■□□□□ 0.11
PACS1-213ENST00000533756 C3P01024 1663 aa15.73■□□□□ 0.11
PACS1-213ENST00000533756 PKD2Q13563 968 aa15.73■□□□□ 0.11
PACS1-213ENST00000533756 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
PACS1-213ENST00000533756 ESF1Q9H501 851 aaKnown RBP15.73■□□□□ 0.11
PACS1-213ENST00000533756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.11
PACS1-213ENST00000533756 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
PACS1-213ENST00000533756 NUP153P49790 1475 aaKnown RBP15.67■□□□□ 0.1
PACS1-213ENST00000533756 RGS17Q9UGC6 210 aaPredicted RBP15.67■□□□□ 0.1
PACS1-213ENST00000533756 PLA2R1Q13018 1463 aa15.66■□□□□ 0.1
PACS1-213ENST00000533756 PLCH2O75038 1416 aa15.66■□□□□ 0.1
PACS1-213ENST00000533756 NPATQ14207 1427 aa15.66■□□□□ 0.1
PACS1-213ENST00000533756 CNTLNQ9NXG0 1405 aa15.66■□□□□ 0.1
PACS1-213ENST00000533756 AGLP35573 1532 aa15.65■□□□□ 0.1
PACS1-213ENST00000533756 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
PACS1-213ENST00000533756 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
PACS1-213ENST00000533756 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
PACS1-213ENST00000533756 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
PACS1-213ENST00000533756 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
PACS1-213ENST00000533756 CPS1P31327 1500 aa15.62■□□□□ 0.09
PACS1-213ENST00000533756 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
PACS1-213ENST00000533756 SAMD9Q5K651 1589 aa15.58■□□□□ 0.09
PACS1-213ENST00000533756 AFAP1Q8N556 730 aa15.58■□□□□ 0.08
PACS1-213ENST00000533756 KDM5CP41229 1560 aa15.58■□□□□ 0.08
PACS1-213ENST00000533756 DIP2CQ9Y2E4 1556 aa15.58■□□□□ 0.08
PACS1-213ENST00000533756 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
PACS1-213ENST00000533756 ZMYM3Q14202 1370 aa15.56■□□□□ 0.08
PACS1-213ENST00000533756 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
PACS1-213ENST00000533756 MLH3Q9UHC1 1453 aa15.54■□□□□ 0.08
PACS1-213ENST00000533756 POTEAQ6S8J7 498 aa15.54■□□□□ 0.08
PACS1-213ENST00000533756 MROH2AA6NES4 1674 aa15.53■□□□□ 0.08
PACS1-213ENST00000533756 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
PACS1-213ENST00000533756 ALKQ9UM73 1620 aa15.53■□□□□ 0.08
PACS1-213ENST00000533756 CEP170BQ9Y4F5 1589 aaPredicted RBP15.5■□□□□ 0.07
PACS1-213ENST00000533756 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
PACS1-213ENST00000533756 SUPT6HQ7KZ85 1726 aaKnown RBP15.48■□□□□ 0.07
PACS1-213ENST00000533756 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
PACS1-213ENST00000533756 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.06
PACS1-213ENST00000533756 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
PACS1-213ENST00000533756 A2ML1A8K2U0 1454 aa15.41■□□□□ 0.06
PACS1-213ENST00000533756 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
PACS1-213ENST00000533756 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
PACS1-213ENST00000533756 VWDEQ8N2E2 1590 aa15.41■□□□□ 0.06
PACS1-213ENST00000533756 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
PACS1-213ENST00000533756 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
PACS1-213ENST00000533756 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
PACS1-213ENST00000533756 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
PACS1-213ENST00000533756 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
PACS1-213ENST00000533756 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
PACS1-213ENST00000533756 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
PACS1-213ENST00000533756 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
PACS1-213ENST00000533756 RNF17Q9BXT8 1623 aaKnown RBP15.35■□□□□ 0.05
PACS1-213ENST00000533756 CLTCQ00610 1675 aaKnown RBP15.35■□□□□ 0.05
PACS1-213ENST00000533756 SETD1AO15047 1707 aaKnown RBP15.35■□□□□ 0.05
PACS1-213ENST00000533756 MED14O60244 1454 aa15.33■□□□□ 0.05
PACS1-213ENST00000533756 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
PACS1-213ENST00000533756 NPHP4O75161 1426 aaPredicted RBP15.32■□□□□ 0.04
PACS1-213ENST00000533756 THEMISQ8N1K5 641 aaPredicted RBP15.31■□□□□ 0.04
PACS1-213ENST00000533756 KIF14Q15058 1648 aa15.31■□□□□ 0.04
PACS1-213ENST00000533756 ABCC1P33527 1531 aa15.3■□□□□ 0.04
PACS1-213ENST00000533756 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
PACS1-213ENST00000533756 SYNMO15061 1565 aa15.29■□□□□ 0.04
PACS1-213ENST00000533756 GGT6Q6P531 493 aa15.29■□□□□ 0.04
PACS1-213ENST00000533756 SRCAPQ6ZRS2 3230 aa15.28■□□□□ 0.04
PACS1-213ENST00000533756 TROQ12816 1431 aaPredicted RBP15.28■□□□□ 0.04
PACS1-213ENST00000533756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.04
PACS1-213ENST00000533756 ITSN2Q9NZM3 1697 aa15.27■□□□□ 0.03
PACS1-213ENST00000533756 DEPDC5O75140 1603 aa15.27■□□□□ 0.03
PACS1-213ENST00000533756 CLIP1P30622 1438 aa15.26■□□□□ 0.03
PACS1-213ENST00000533756 CDC42BPBQ9Y5S2 1711 aa15.26■□□□□ 0.03
PACS1-213ENST00000533756 TNRQ92752 1358 aa15.25■□□□□ 0.03
PACS1-213ENST00000533756 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
PACS1-213ENST00000533756 SPAG9O60271 1321 aaKnown RBP15.24■□□□□ 0.03
PACS1-213ENST00000533756 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms