RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TMF1P82094 1093 aa16.37■□□□□ 0.21
RAD50-209ENST00000533482 CCDC18Q5T9S5 1454 aa16.37■□□□□ 0.21
RAD50-209ENST00000533482 CUX1P39880 1505 aa16.36■□□□□ 0.21
RAD50-209ENST00000533482 PTPRGP23470 1445 aa16.35■□□□□ 0.21
RAD50-209ENST00000533482 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
RAD50-209ENST00000533482 SOX12O15370 315 aa16.33■□□□□ 0.2
RAD50-209ENST00000533482 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
RAD50-209ENST00000533482 ARXQ96QS3 562 aa16.33■□□□□ 0.2
RAD50-209ENST00000533482 ROCK2O75116 1388 aaKnown RBP16.32■□□□□ 0.2
RAD50-209ENST00000533482 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
RAD50-209ENST00000533482 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
RAD50-209ENST00000533482 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
RAD50-209ENST00000533482 KANK1Q14678 1352 aa16.31■□□□□ 0.2
RAD50-209ENST00000533482 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
RAD50-209ENST00000533482 RGS3P49796 1198 aa16.31■□□□□ 0.2
RAD50-209ENST00000533482 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
RAD50-209ENST00000533482 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
RAD50-209ENST00000533482 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
RAD50-209ENST00000533482 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
RAD50-209ENST00000533482 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
RAD50-209ENST00000533482 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
RAD50-209ENST00000533482 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
RAD50-209ENST00000533482 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
RAD50-209ENST00000533482 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
RAD50-209ENST00000533482 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
RAD50-209ENST00000533482 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
RAD50-209ENST00000533482 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
RAD50-209ENST00000533482 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
RAD50-209ENST00000533482 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
RAD50-209ENST00000533482 A0A0G2JS52 829 aa16.23■□□□□ 0.19
RAD50-209ENST00000533482 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
RAD50-209ENST00000533482 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
RAD50-209ENST00000533482 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
RAD50-209ENST00000533482 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
RAD50-209ENST00000533482 HMGXB3Q12766 1538 aa16.21■□□□□ 0.18
RAD50-209ENST00000533482 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
RAD50-209ENST00000533482 NCOA2Q15596 1464 aa16.19■□□□□ 0.18
RAD50-209ENST00000533482 RSPH4AQ5TD94 716 aa16.19■□□□□ 0.18
RAD50-209ENST00000533482 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
RAD50-209ENST00000533482 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
RAD50-209ENST00000533482 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
RAD50-209ENST00000533482 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
RAD50-209ENST00000533482 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
RAD50-209ENST00000533482 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
RAD50-209ENST00000533482 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
RAD50-209ENST00000533482 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
RAD50-209ENST00000533482 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
RAD50-209ENST00000533482 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
RAD50-209ENST00000533482 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
RAD50-209ENST00000533482 RALBP1Q15311 655 aa16.15■□□□□ 0.18
RAD50-209ENST00000533482 FTSJ3Q8IY81 847 aaKnown RBP16.15■□□□□ 0.18
RAD50-209ENST00000533482 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
RAD50-209ENST00000533482 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
RAD50-209ENST00000533482 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
RAD50-209ENST00000533482 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
RAD50-209ENST00000533482 PRDM2Q13029 1718 aa16.13■□□□□ 0.17
RAD50-209ENST00000533482 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
RAD50-209ENST00000533482 USP47Q96K76 1375 aa16.13■□□□□ 0.17
RAD50-209ENST00000533482 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
RAD50-209ENST00000533482 PANK3Q9H999 370 aa16.12■□□□□ 0.17
RAD50-209ENST00000533482 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
RAD50-209ENST00000533482 KIF7Q2M1P5 1343 aa16.11■□□□□ 0.17
RAD50-209ENST00000533482 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
RAD50-209ENST00000533482 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAD50-209ENST00000533482 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
RAD50-209ENST00000533482 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
RAD50-209ENST00000533482 PLIN1O60240 522 aa16.08■□□□□ 0.17
RAD50-209ENST00000533482 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
RAD50-209ENST00000533482 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
RAD50-209ENST00000533482 ERICH6BQ5W0A0 696 aa16.07■□□□□ 0.16
RAD50-209ENST00000533482 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
RAD50-209ENST00000533482 CCDC7Q96M83 1385 aa16.06■□□□□ 0.16
RAD50-209ENST00000533482 ANKRD50Q9ULJ7 1429 aa16.06■□□□□ 0.16
RAD50-209ENST00000533482 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
RAD50-209ENST00000533482 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
RAD50-209ENST00000533482 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
RAD50-209ENST00000533482 HAP1P54257 671 aaPredicted RBP16.05■□□□□ 0.16
RAD50-209ENST00000533482 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
RAD50-209ENST00000533482 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
RAD50-209ENST00000533482 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
RAD50-209ENST00000533482 BECN1Q14457 450 aa16.03■□□□□ 0.16
RAD50-209ENST00000533482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■□□□ 12.4
RAD50-209ENST00000533482 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
RAD50-209ENST00000533482 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
RAD50-209ENST00000533482 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
RAD50-209ENST00000533482 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
RAD50-209ENST00000533482 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
RAD50-209ENST00000533482 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
RAD50-209ENST00000533482 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
RAD50-209ENST00000533482 CDK13Q14004 1512 aaKnown RBP16■□□□□ 0.15
RAD50-209ENST00000533482 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
RAD50-209ENST00000533482 TIAM1Q13009 1591 aa16■□□□□ 0.15
RAD50-209ENST00000533482 WDR97A6NE52 1622 aa16■□□□□ 0.15
RAD50-209ENST00000533482 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
RAD50-209ENST00000533482 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
RAD50-209ENST00000533482 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
RAD50-209ENST00000533482 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
RAD50-209ENST00000533482 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
RAD50-209ENST00000533482 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
RAD50-209ENST00000533482 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms