RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
BDNF-218ENST00000533246 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
BDNF-218ENST00000533246 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
BDNF-218ENST00000533246 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
BDNF-218ENST00000533246 POGKQ9P215 609 aa15.95■□□□□ 0.14
BDNF-218ENST00000533246 STK26Q9P289 416 aa15.94■□□□□ 0.14
BDNF-218ENST00000533246 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
BDNF-218ENST00000533246 SOX12O15370 315 aa15.93■□□□□ 0.14
BDNF-218ENST00000533246 ST20-MTHFSA0A0A6YYL1 179 aa15.92■□□□□ 0.14
BDNF-218ENST00000533246 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
BDNF-218ENST00000533246 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
BDNF-218ENST00000533246 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
BDNF-218ENST00000533246 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
BDNF-218ENST00000533246 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
BDNF-218ENST00000533246 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
BDNF-218ENST00000533246 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
BDNF-218ENST00000533246 KIF3BO15066 747 aa15.87■□□□□ 0.13
BDNF-218ENST00000533246 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
BDNF-218ENST00000533246 ZMYND15Q9H091 742 aa15.86■□□□□ 0.13
BDNF-218ENST00000533246 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
BDNF-218ENST00000533246 RCAN3Q9UKA8 241 aa15.85■□□□□ 0.13
BDNF-218ENST00000533246 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
BDNF-218ENST00000533246 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
BDNF-218ENST00000533246 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
BDNF-218ENST00000533246 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
BDNF-218ENST00000533246 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
BDNF-218ENST00000533246 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
BDNF-218ENST00000533246 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
BDNF-218ENST00000533246 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.13
BDNF-218ENST00000533246 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
BDNF-218ENST00000533246 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
BDNF-218ENST00000533246 KIF21BO75037 1637 aa15.82■□□□□ 0.12
BDNF-218ENST00000533246 A0A0G2JS52 829 aa15.82■□□□□ 0.12
BDNF-218ENST00000533246 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
BDNF-218ENST00000533246 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
BDNF-218ENST00000533246 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
BDNF-218ENST00000533246 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
BDNF-218ENST00000533246 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
BDNF-218ENST00000533246 PLIN1O60240 522 aa15.79■□□□□ 0.12
BDNF-218ENST00000533246 ANP32BQ92688 251 aaKnown RBP15.78■□□□□ 0.12
BDNF-218ENST00000533246 DDRGK1Q96HY6 314 aa15.78■□□□□ 0.12
BDNF-218ENST00000533246 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
BDNF-218ENST00000533246 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.12
BDNF-218ENST00000533246 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
BDNF-218ENST00000533246 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.11
BDNF-218ENST00000533246 BECN1Q14457 450 aa15.76■□□□□ 0.11
BDNF-218ENST00000533246 PANK3Q9H999 370 aa15.76■□□□□ 0.11
BDNF-218ENST00000533246 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
BDNF-218ENST00000533246 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
BDNF-218ENST00000533246 NLRP13Q86W25 1043 aa15.75■□□□□ 0.11
BDNF-218ENST00000533246 RALBP1Q15311 655 aa15.75■□□□□ 0.11
BDNF-218ENST00000533246 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
BDNF-218ENST00000533246 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
BDNF-218ENST00000533246 KANK1Q14678 1352 aa15.73■□□□□ 0.11
BDNF-218ENST00000533246 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
BDNF-218ENST00000533246 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
BDNF-218ENST00000533246 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
BDNF-218ENST00000533246 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.11
BDNF-218ENST00000533246 MSH5O43196 834 aa15.71■□□□□ 0.11
BDNF-218ENST00000533246 NUTM2FA1L443 756 aa15.71■□□□□ 0.1
BDNF-218ENST00000533246 APBB1O00213 710 aa15.71■□□□□ 0.1
BDNF-218ENST00000533246 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.1
BDNF-218ENST00000533246 FGD6Q6ZV73 1430 aa15.7■□□□□ 0.1
BDNF-218ENST00000533246 WASHC2AQ641Q2 1341 aa15.69■□□□□ 0.1
BDNF-218ENST00000533246 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
BDNF-218ENST00000533246 BCL2L13Q9BXK5 485 aa15.69■□□□□ 0.1
BDNF-218ENST00000533246 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
BDNF-218ENST00000533246 USP47Q96K76 1375 aa15.69■□□□□ 0.1
BDNF-218ENST00000533246 FANCIQ9NVI1 1328 aa15.68■□□□□ 0.1
BDNF-218ENST00000533246 EXOC6Q8TAG9 804 aa15.68■□□□□ 0.1
BDNF-218ENST00000533246 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
BDNF-218ENST00000533246 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
BDNF-218ENST00000533246 KIF7Q2M1P5 1343 aa15.67■□□□□ 0.1
BDNF-218ENST00000533246 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
BDNF-218ENST00000533246 NESP48681 1621 aa15.66■□□□□ 0.1
BDNF-218ENST00000533246 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
BDNF-218ENST00000533246 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
BDNF-218ENST00000533246 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
BDNF-218ENST00000533246 PTPRGP23470 1445 aa15.65■□□□□ 0.1
BDNF-218ENST00000533246 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
BDNF-218ENST00000533246 SLC4A3P48751 1232 aa15.63■□□□□ 0.09
BDNF-218ENST00000533246 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
BDNF-218ENST00000533246 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
BDNF-218ENST00000533246 MYOM3Q5VTT5 1437 aa15.61■□□□□ 0.09
BDNF-218ENST00000533246 APAF1O14727 1248 aa15.61■□□□□ 0.09
BDNF-218ENST00000533246 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
BDNF-218ENST00000533246 ELL2O00472 640 aaPredicted RBP15.61■□□□□ 0.09
BDNF-218ENST00000533246 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
BDNF-218ENST00000533246 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
BDNF-218ENST00000533246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
BDNF-218ENST00000533246 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
BDNF-218ENST00000533246 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
BDNF-218ENST00000533246 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
BDNF-218ENST00000533246 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
BDNF-218ENST00000533246 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
BDNF-218ENST00000533246 TAOK2Q9UL54 1235 aa15.59■□□□□ 0.09
BDNF-218ENST00000533246 ZBED9Q6R2W3 1325 aa15.59■□□□□ 0.09
BDNF-218ENST00000533246 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
BDNF-218ENST00000533246 CCDC7Q96M83 1385 aa15.59■□□□□ 0.09
BDNF-218ENST00000533246 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms