RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DAPK1P53355 1430 aa21.86■■□□□ 1.09
CACNA1E-208ENST00000533229 ABCC5O15440 1437 aa21.85■■□□□ 1.09
CACNA1E-208ENST00000533229 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
CACNA1E-208ENST00000533229 TROQ12816 1431 aaPredicted RBP21.82■■□□□ 1.08
CACNA1E-208ENST00000533229 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
CACNA1E-208ENST00000533229 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CACNA1E-208ENST00000533229 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
CACNA1E-208ENST00000533229 DNMT1P26358 1616 aaKnown RBP21.78■■□□□ 1.08
CACNA1E-208ENST00000533229 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CACNA1E-208ENST00000533229 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
CACNA1E-208ENST00000533229 KIF14Q15058 1648 aa21.72■■□□□ 1.07
CACNA1E-208ENST00000533229 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
CACNA1E-208ENST00000533229 ZNF777Q9ULD5 760 aaPredicted RBP21.71■■□□□ 1.07
CACNA1E-208ENST00000533229 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
CACNA1E-208ENST00000533229 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
CACNA1E-208ENST00000533229 ATP10BO94823 1461 aa21.67■■□□□ 1.06
CACNA1E-208ENST00000533229 ABCA8O94911 1581 aa21.67■■□□□ 1.06
CACNA1E-208ENST00000533229 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
CACNA1E-208ENST00000533229 SLC4A1APQ9BWU0 796 aaKnown RBP21.66■■□□□ 1.06
CACNA1E-208ENST00000533229 ADCY10Q96PN6 1610 aa21.66■■□□□ 1.06
CACNA1E-208ENST00000533229 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
CACNA1E-208ENST00000533229 ANP32CO43423 234 aa21.65■■□□□ 1.06
CACNA1E-208ENST00000533229 HSPA5P11021 654 aaKnown RBP21.64■■□□□ 1.06
CACNA1E-208ENST00000533229 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
CACNA1E-208ENST00000533229 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
CACNA1E-208ENST00000533229 CCER2I3L3R5 266 aa21.61■■□□□ 1.05
CACNA1E-208ENST00000533229 ABCC10Q5T3U5 1492 aa21.6■■□□□ 1.05
CACNA1E-208ENST00000533229 PZPP20742 1482 aa21.6■■□□□ 1.05
CACNA1E-208ENST00000533229 WASHC2AQ641Q2 1341 aa21.59■■□□□ 1.05
CACNA1E-208ENST00000533229 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
CACNA1E-208ENST00000533229 NBPF8Q3BBV2 869 aa21.58■■□□□ 1.05
CACNA1E-208ENST00000533229 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.04
CACNA1E-208ENST00000533229 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
CACNA1E-208ENST00000533229 TEX14Q8IWB6 1497 aa21.57■■□□□ 1.04
CACNA1E-208ENST00000533229 PTPRGP23470 1445 aa21.56■■□□□ 1.04
CACNA1E-208ENST00000533229 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
CACNA1E-208ENST00000533229 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.03
CACNA1E-208ENST00000533229 CDC42BPAQ5VT25 1732 aa21.51■■□□□ 1.03
CACNA1E-208ENST00000533229 CROCC2H7BZ55 1655 aa21.51■■□□□ 1.03
CACNA1E-208ENST00000533229 ADGBQ8N7X0 1667 aa21.51■■□□□ 1.03
CACNA1E-208ENST00000533229 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
CACNA1E-208ENST00000533229 PKD2Q13563 968 aa21.49■■□□□ 1.03
CACNA1E-208ENST00000533229 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
CACNA1E-208ENST00000533229 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
CACNA1E-208ENST00000533229 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
CACNA1E-208ENST00000533229 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.02
CACNA1E-208ENST00000533229 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
CACNA1E-208ENST00000533229 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
CACNA1E-208ENST00000533229 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
CACNA1E-208ENST00000533229 SPATA31E1Q6ZUB1 1445 aa21.43■■□□□ 1.02
CACNA1E-208ENST00000533229 CHD1O14646 1710 aa21.42■■□□□ 1.02
CACNA1E-208ENST00000533229 NUP155O75694 1391 aa21.42■■□□□ 1.02
CACNA1E-208ENST00000533229 CCDC7Q96M83 1385 aa21.41■■□□□ 1.02
CACNA1E-208ENST00000533229 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.01
CACNA1E-208ENST00000533229 KIF15Q9NS87 1388 aa21.39■■□□□ 1.01
CACNA1E-208ENST00000533229 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
CACNA1E-208ENST00000533229 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
CACNA1E-208ENST00000533229 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
CACNA1E-208ENST00000533229 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
CACNA1E-208ENST00000533229 KIF7Q2M1P5 1343 aa21.35■■□□□ 1.01
CACNA1E-208ENST00000533229 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
CACNA1E-208ENST00000533229 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1
CACNA1E-208ENST00000533229 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1
CACNA1E-208ENST00000533229 CCDC184Q52MB2 194 aa21.32■■□□□ 1
CACNA1E-208ENST00000533229 PREX2Q70Z35 1606 aa21.32■■□□□ 1
CACNA1E-208ENST00000533229 KDM5DQ9BY66 1539 aa21.31■■□□□ 1
CACNA1E-208ENST00000533229 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
CACNA1E-208ENST00000533229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.29■■□□□ 1
CACNA1E-208ENST00000533229 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
CACNA1E-208ENST00000533229 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
CACNA1E-208ENST00000533229 FKBP8Q14318 412 aa21.29■■□□□ 1
CACNA1E-208ENST00000533229 ABCC2Q92887 1545 aa21.28■■□□□ 1
CACNA1E-208ENST00000533229 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
CACNA1E-208ENST00000533229 USP47Q96K76 1375 aa21.26■□□□□ 0.99
CACNA1E-208ENST00000533229 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
CACNA1E-208ENST00000533229 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
CACNA1E-208ENST00000533229 BCANQ96GW7 911 aa21.25■□□□□ 0.99
CACNA1E-208ENST00000533229 UHRF1BP1Q6BDS2 1440 aa21.24■□□□□ 0.99
CACNA1E-208ENST00000533229 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
CACNA1E-208ENST00000533229 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
CACNA1E-208ENST00000533229 DCAF11Q8TEB1 546 aa21.19■□□□□ 0.98
CACNA1E-208ENST00000533229 BCORL1Q5H9F3 1711 aa21.19■□□□□ 0.98
CACNA1E-208ENST00000533229 ARHGEF12Q9NZN5 1544 aa21.18■□□□□ 0.98
CACNA1E-208ENST00000533229 KDM5CP41229 1560 aa21.18■□□□□ 0.98
CACNA1E-208ENST00000533229 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
CACNA1E-208ENST00000533229 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
CACNA1E-208ENST00000533229 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
CACNA1E-208ENST00000533229 MAST1Q9Y2H9 1570 aa21.16■□□□□ 0.98
CACNA1E-208ENST00000533229 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
CACNA1E-208ENST00000533229 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
CACNA1E-208ENST00000533229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.98
CACNA1E-208ENST00000533229 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
CACNA1E-208ENST00000533229 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
CACNA1E-208ENST00000533229 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
CACNA1E-208ENST00000533229 PLCH2O75038 1416 aa21.15■□□□□ 0.98
CACNA1E-208ENST00000533229 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.97
CACNA1E-208ENST00000533229 NEFLP07196 543 aa21.14■□□□□ 0.97
CACNA1E-208ENST00000533229 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
CACNA1E-208ENST00000533229 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
CACNA1E-208ENST00000533229 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms